T2011 Ostreococcus clock, TOC1 degr L - PLM_89, version 2, SIMPLIFIED Version 1
Simulate Model on JWSSimplified model file for PLaSMo accession ID PLM_89, version 2 (use simplified if your software cannot read the file, e.g. Sloppy Cell)
SEEK ID: https://fairdomhub.org/models/528?version=1
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PLM89_2_SIMPLIFIED.xml (XML document - 67.5 KB)
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Model format: SBML
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Created: 10th Jan 2019 at 17:52
Last updated: 10th Jan 2019 at 17:56
Last used: 23rd Jan 2019 at 11:30
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Related items
Projects: PlaSMo model repository
Institutions: University of Edinburgh
What is PlaSMo?
PlaSMo stands for Plant Systems-biology Modelling
Ensuring the achievements of yesterday's Mathematical Modellers will be available for the Systems Biologists of tomorrow.
Our aims
- To identify plant mathematical models useful to the UK plant systems biology community, which are currently in a variety of legacy formats and in danger of being lost
- To represent these models in a declarative XML-based
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Programme: SynthSys
Public web page: Not specified
Collection of models submitted to PLaSMo by Carl Troein and automatically transferred to FAIRDOM Hub.
Snapshots: No snapshots
This is a version of the T2011.1.2 Ostreococcus tauri 1-loop clock model where light input to the degradation rate of TOC1 has been eliminated by setting the rate to the value it had in the light in the original model. This model was used to generate Figure 2D in Dixon et al. New Phytologist (2014)<br><br><strong>Related Publications</strong></strong><br> Laura E. Dixon, Sarah K. Hodge, Gerben van Ooijen, Carl Troein, Ozgur E. Akman, Andrew J. Millar (2014).
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Person responsible: BioData SynthSys
Snapshots: No snapshots
This is a version of the T2011.1.2 Ostreococcus tauri 1-loop clock model where light input to the degradation rate of TOC1 has been eliminated by setting the rate to the value it had in the light in the original model. This model was used to generate Figure 2D in Dixon et al. New Phytologist (2014)
Related Publications
Laura E. Dixon, Sarah K. Hodge, Gerben van Ooijen, Carl Troein, Ozgur E. Akman, Andrew J. Millar (2014). Light and circadian regulation of clock
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Contributor: BioData SynthSys
Biological problem addressed: Gene Regulatory Network
Snapshots: No snapshots
