README
Version 1

Download

View content

Overview
Related items

README (from BioDare)

SEEK ID: https://fairdomhub.org/data_files/8733?version=1

Filename: README.rtf

Format: RTF document

Size: 1.52 KB

Help

Tree Split Graph

Creators and Submitter

Creators

Not specified

Additional credit

Benedicte Wenden

Submitter

Daniel Thedie

License

Creative Commons Attribution 4.0 International (CC-BY-4.0)

Activity

Views: 47 Downloads: 2

Created: 18th Jun 2026 at 13:14

Last updated: 18th Jun 2026 at 13:14

Version History

Version 1 (earliest) Created 18th Jun 2026 at 13:14 by Daniel Thedie

No revision comments

Related items

Advanced People list for this Data file with search and filtering

Daniel Thedie

Projects: Millar group, BioDare1

Institutions: University of Edinburgh, School of Biological Sciences, University of Edinburgh

https://orcid.org/0000-0002-1352-7245

Expertise: Data Management, Python, R, Programming, microscopy, fluorescence protein fusions, Software Engineering

Tools: Data Management, Python, R, Fluorescence and confocal microscopy, Time-lapse fluorescence microscopy Flow cytometry, Fluorecence based reporter gene analyses/single cell analyses

Research Software Engineer in the Biological Research Data Management team (BioRDM) at the University of Edinburgh.

Advanced Programmes list for this Data file with search and filtering

Centre for Engineering Biology (prev. SynthSys)

The Centre for Engineering Biology is the University of Edinburgh's research organisation in interdisciplinary, Synthetic and Systems Biology, founded in 2023 as the successor to SynthSys, itself founded in 2012 as the successor to the Centre for Systems Biology at Edinburgh (CSBE). CSBE was newly founded in 2007. The Centre for Engineering Biology is a hub organisation that links across multiple, major funding awards, including an Engineering Biology Mission Hub, and EPSRC C-loop.

Projects: Millar group, PHYTOCAL: Phytochrome Control of Resource Allocation and Growth in Arabidopsis and in Brassicaceae crops, TiMet, POP - the Parameter Optimisation Problem, Regulation of flowering time in natural conditions, PlaSMo model repository, BioDare1

Web page: https://biology.ed.ac.uk/centre-engineering-biology

Advanced Projects list for this Data file with search and filtering

BioDare1

Experiment data previously hosted on the original version of BioDare (biodare.ed.ac.uk).

Programme: Centre for Engineering Biology (prev. SynthSys)

Public web page: Not specified

Organisms: Not specified

Advanced Investigations list for this Data file with search and filtering

Wenden Benedicte

BioDare1

Collection of experiments created by Wenden Benedicte on the original BioDare and automatically transferred to FAIRDOM Hub.

Created: 18th Jun 2026 at 13:01

Advanced Studies list for this Data file with search and filtering

Wenden et al. (2012)

BioDare1

Spontaneous spatiotemporal waves of gene expression from biological clocks in the leaf

Wenden et al. (2012)

DOI: 10.1073/pnas.1118814109

Submitter: Daniel Thedie

Investigation: Wenden Benedicte

Assays: BW-detached_LD-LL_#03, BW-detached_LD-LL_#06, BW-detached_LL-LL_#14, BW-detached_LL-LL_#16, BW-detached_LL-LL_#20, BW-intact_LD-LL_#23, BW-intact_LL-LD_#31, BW-intact_LL-LL_#37, BW-intact_LL-LL_#46, BW-intact_LL-LL_#56, BW-intact_LL-LL_#58

Snapshots: No snapshots

Created: 18th Jun 2026 at 13:01

Advanced Assays list for this Data file with search and filtering

BW-intact_LL-LL_#46

BioDare1

BW-intact_LL-LL_#46

Property	Value
BioDare ID	13394446784669
Author	Benedicte Wenden
Institution	University of Edinburgh
License	CC_BY

Description

Intact leaves of CCA1:LUC grown and imaged under constant light. Sample number 46 of Table S1 in the 2012 PNAS paper "Spontaneous spatiotemporal waves of gene expression from biological clocks in the leaf". The paper is attached as a file to sample #03.