Sample_list
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List of samples used in the assay (extracted from original BioDare metadata and converted to csv)

SEEK ID: https://fairdomhub.org/data_files/8688?version=1

Filename: Sample_list.csv

Format: Comma-separated values document

Size: 13.5 KB

sample_id,sample_type,origin,growth_stage,age,marker,growth_cond_name,experiment_cond_name,ignored,genetic_info.species,genetic_info.background,genetic_info.genotype,genetic_info.line,genetic_info.provenance,param.@name,param.@value
1,seedling,seedling,seedling,7,Actin,8L:16D,SD to LD,false,Arabidopsis thaliana,Columbia (Col),Img Background,unknown,Robust stock,TAG,Luc
2,seedling,seedling,seedling,7,PRR9,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0002,Robust stock,TAG,Luc
3,seedling,seedling,seedling,7,PRR9,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0002,Robust stock,TAG,Luc
4,seedling,seedling,seedling,7,PRR9,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0002,Robust stock,TAG,Luc
5,seedling,seedling,seedling,7,PRR9,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0002,Robust stock,TAG,Luc
6,seedling,seedling,seedling,7,PRR9,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0002,Robust stock,TAG,Luc
7,seedling,seedling,seedling,7,PRR9,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0002,Robust stock,TAG,Luc
8,seedling,seedling,seedling,7,PRR9,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0002,Robust stock,TAG,Luc
9,seedling,seedling,seedling,7,PRR9,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0002,Robust stock,TAG,Luc
10,seedling,seedling,seedling,7,PRR9,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0002,Robust stock,TAG,Luc
11,seedling,seedling,seedling,7,PRR9,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0002,Robust stock,TAG,Luc
12,seedling,seedling,seedling,7,PRR9,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0002,Robust stock,TAG,Luc
13,seedling,seedling,seedling,7,PRR9,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0002,Robust stock,TAG,Luc
14,seedling,seedling,seedling,7,PRR9,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0002,Robust stock,TAG,Luc
15,seedling,seedling,seedling,7,PRR9,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0002,Robust stock,TAG,Luc
16,seedling,seedling,seedling,7,TOC1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0006,Robust stock,TAG,Luc
17,seedling,seedling,seedling,7,TOC1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0006,Robust stock,TAG,Luc
18,seedling,seedling,seedling,7,TOC1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0006,Robust stock,TAG,Luc
19,seedling,seedling,seedling,7,TOC1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0006,Robust stock,TAG,Luc
20,seedling,seedling,seedling,7,TOC1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0006,Robust stock,TAG,Luc
21,seedling,seedling,seedling,7,TOC1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0006,Robust stock,TAG,Luc
22,seedling,seedling,seedling,7,TOC1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0006,Robust stock,TAG,Luc
23,seedling,seedling,seedling,7,TOC1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0006,Robust stock,TAG,Luc
24,seedling,seedling,seedling,7,TOC1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0006,Robust stock,TAG,Luc
25,seedling,seedling,seedling,7,TOC1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0006,Robust stock,TAG,Luc
26,seedling,seedling,seedling,7,TOC1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0006,Robust stock,TAG,Luc
27,seedling,seedling,seedling,7,TOC1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0006,Robust stock,TAG,Luc
28,seedling,seedling,seedling,7,TOC1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0006,Robust stock,TAG,Luc
29,seedling,seedling,seedling,7,TOC1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0006,Robust stock,TAG,Luc
30,seedling,seedling,seedling,7,TOC1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0006,Robust stock,TAG,Luc
31,seedling,seedling,seedling,7,CCA1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0007,Robust stock,TAG,Luc
32,seedling,seedling,seedling,7,CCA1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0007,Robust stock,TAG,Luc
33,seedling,seedling,seedling,7,CCA1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0007,Robust stock,TAG,Luc
34,seedling,seedling,seedling,7,CCA1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0007,Robust stock,TAG,Luc
35,seedling,seedling,seedling,7,CCA1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0007,Robust stock,TAG,Luc
36,seedling,seedling,seedling,7,CCA1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0007,Robust stock,TAG,Luc
37,seedling,seedling,seedling,7,CCA1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0007,Robust stock,TAG,Luc
38,seedling,seedling,seedling,7,CCA1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0007,Robust stock,TAG,Luc
39,seedling,seedling,seedling,7,CCA1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0007,Robust stock,TAG,Luc
40,seedling,seedling,seedling,7,CCA1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0007,Robust stock,TAG,Luc
41,seedling,seedling,seedling,7,CCA1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0007,Robust stock,TAG,Luc
42,seedling,seedling,seedling,7,CCA1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0007,Robust stock,TAG,Luc
43,seedling,seedling,seedling,7,CCA1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0007,Robust stock,TAG,Luc
44,seedling,seedling,seedling,7,CCA1,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0007,Robust stock,TAG,Luc
45,seedling,seedling,seedling,7,GI,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0009,Robust stock,TAG,Luc
46,seedling,seedling,seedling,7,GI,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0009,Robust stock,TAG,Luc
47,seedling,seedling,seedling,7,GI,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0009,Robust stock,TAG,Luc
48,seedling,seedling,seedling,7,GI,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0009,Robust stock,TAG,Luc
49,seedling,seedling,seedling,7,GI,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0009,Robust stock,TAG,Luc
50,seedling,seedling,seedling,7,GI,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0009,Robust stock,TAG,Luc
51,seedling,seedling,seedling,7,GI,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0009,Robust stock,TAG,Luc
52,seedling,seedling,seedling,7,GI,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0009,Robust stock,TAG,Luc
53,seedling,seedling,seedling,7,GI,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0009,Robust stock,TAG,Luc
54,seedling,seedling,seedling,7,GI,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0009,Robust stock,TAG,Luc
55,seedling,seedling,seedling,7,GI,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0009,Robust stock,TAG,Luc
56,seedling,seedling,seedling,7,GI,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0009,Robust stock,TAG,Luc
57,seedling,seedling,seedling,7,GI,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0009,Robust stock,TAG,Luc
58,seedling,seedling,seedling,7,GI,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0009,Robust stock,TAG,Luc
59,seedling,seedling,seedling,7,GI,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0009,Robust stock,TAG,Luc
60,seedling,seedling,seedling,7,GI,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0009,Robust stock,TAG,Luc
61,seedling,seedling,seedling,7,CAB,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0005,Robust stock,TAG,Luc
62,seedling,seedling,seedling,7,CAB,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0005,Robust stock,TAG,Luc
63,seedling,seedling,seedling,7,CAB,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0005,Robust stock,TAG,Luc
64,seedling,seedling,seedling,7,CAB,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0005,Robust stock,TAG,Luc
65,seedling,seedling,seedling,7,CAB,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0005,Robust stock,TAG,Luc
66,seedling,seedling,seedling,7,CAB,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0005,Robust stock,TAG,Luc
67,seedling,seedling,seedling,7,CAB,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0005,Robust stock,TAG,Luc
68,seedling,seedling,seedling,7,CAB,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0005,Robust stock,TAG,Luc
69,seedling,seedling,seedling,7,CAB,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0005,Robust stock,TAG,Luc
70,seedling,seedling,seedling,7,CAB,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0005,Robust stock,TAG,Luc
71,seedling,seedling,seedling,7,CAB,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0005,Robust stock,TAG,Luc
72,seedling,seedling,seedling,7,CAB,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0005,Robust stock,TAG,Luc
73,seedling,seedling,seedling,7,CAB,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0005,Robust stock,TAG,Luc
74,seedling,seedling,seedling,7,CAB,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0005,Robust stock,TAG,Luc
75,seedling,seedling,seedling,7,CAB,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0005,Robust stock,TAG,Luc
76,seedling,seedling,seedling,7,35S,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
77,seedling,seedling,seedling,7,35S,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
78,seedling,seedling,seedling,7,35S,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
79,seedling,seedling,seedling,7,35S,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
80,seedling,seedling,seedling,7,35S,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
81,seedling,seedling,seedling,7,35S,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
82,seedling,seedling,seedling,7,35S,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
83,seedling,seedling,seedling,7,35S,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
84,seedling,seedling,seedling,7,35S,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
85,seedling,seedling,seedling,7,35S,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
86,seedling,seedling,seedling,7,35S,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
87,seedling,seedling,seedling,7,35S,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
88,seedling,seedling,seedling,7,35S,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
89,seedling,seedling,seedling,7,35S,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
90,seedling,seedling,seedling,7,35S,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
91,seedling,seedling,seedling,7,35S,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
92,seedling,seedling,seedling,7,ELF3,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
93,seedling,seedling,seedling,7,ELF3,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
94,seedling,seedling,seedling,7,ELF3,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
95,seedling,seedling,seedling,7,ELF3,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
96,seedling,seedling,seedling,7,ELF3,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
97,seedling,seedling,seedling,7,ELF3,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
98,seedling,seedling,seedling,7,ELF3,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
99,seedling,seedling,seedling,7,ELF3,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
100,seedling,seedling,seedling,7,ELF3,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
101,seedling,seedling,seedling,7,ELF3,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
102,seedling,seedling,seedling,7,ELF3,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc
103,seedling,seedling,seedling,7,ELF3,8L:16D,SD to LD,false,Arabidopsis thaliana,Wasilewski (WS),Wild Type,M0024,Robust stock,TAG,Luc

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Creators and Submitter

Creators

Not specified

Additional credit

Sarah Hodge

Submitter

Daniel Thedie

License

Creative Commons Attribution 4.0 International (CC-BY-4.0)

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Views: 71 Downloads: 2

Created: 18th Jun 2026 at 12:59

Last updated: 18th Jun 2026 at 13:00

Version History

Version 1 (earliest) Created 18th Jun 2026 at 13:00 by Daniel Thedie

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Daniel Thedie

Projects: Millar group, BioDare1

Institutions: University of Edinburgh, School of Biological Sciences, University of Edinburgh

https://orcid.org/0000-0002-1352-7245

Expertise: Data Management, Python, R, Programming, microscopy, fluorescence protein fusions, Software Engineering

Tools: Data Management, Python, R, Fluorescence and confocal microscopy, Time-lapse fluorescence microscopy Flow cytometry, Fluorecence based reporter gene analyses/single cell analyses

Research Software Engineer in the Biological Research Data Management team (BioRDM) at the University of Edinburgh.

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Centre for Engineering Biology (prev. SynthSys)

The Centre for Engineering Biology is the University of Edinburgh's research organisation in interdisciplinary, Synthetic and Systems Biology, founded in 2023 as the successor to SynthSys, itself founded in 2012 as the successor to the Centre for Systems Biology at Edinburgh (CSBE). CSBE was newly founded in 2007. The Centre for Engineering Biology is a hub organisation that links across multiple, major funding awards, including an Engineering Biology Mission Hub, and EPSRC C-loop.

Projects: Millar group, PHYTOCAL: Phytochrome Control of Resource Allocation and Growth in Arabidopsis and in Brassicaceae crops, TiMet, POP - the Parameter Optimisation Problem, Regulation of flowering time in natural conditions, PlaSMo model repository, BioDare1

Web page: https://biology.ed.ac.uk/centre-engineering-biology

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BioDare1