ExploreList of samples used in the assay (extracted from original BioDare metadata and converted to csv)
SEEK ID: https://fairdomhub.org/data_files/8663?version=1
Filename:
Sample_list.csv
Format: Comma-separated values document
Size: 8.98 KB
sample_id,sample_type,origin,growth_stage,age,marker,growth_cond_name,experiment_cond_name,ignored,genetic_info.species,genetic_info.background,genetic_info.genotype,genetic_info.line,genetic_info.provenance,param.@name,param.@value 1,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 2,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 3,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 4,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 5,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 6,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 7,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 8,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 9,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 10,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 11,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 12,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 13,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 14,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 15,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 16,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 17,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 18,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 19,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 20,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 21,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 22,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 23,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 24,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 25,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 26,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 27,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 28,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 29,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 30,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL with GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 31,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 32,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 33,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 34,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 35,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 36,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 37,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 38,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 39,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 40,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 41,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 42,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 43,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 44,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 45,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),Wild Type,empty,Robust stock,TAG,Luc 46,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 47,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 48,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 49,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 50,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 51,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 52,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 53,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 54,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 55,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 56,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 57,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 58,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 59,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc 60,seedling,seedling,seedling,7,CCR2,12L:12D,12L:12D to LL without GA,false,Arabidopsis thaliana,Columbia (Col),prr7-3 prr9-1,empty,Robust stock,TAG,Luc
Export PNG
Creators and Submitter
Activity
Views: 62 Downloads: 7
Created: 18th Jun 2026 at 12:51
Last updated: 18th Jun 2026 at 12:51
TagsThis item has not yet been tagged.
AttributionsNone
Version History
Version 1 (earliest) Created 18th Jun 2026 at 12:51 by Daniel Thedie
No revision comments
Related items
Advanced People list for this Data file with search and filtering
https://orcid.org/0000-0002-1352-7245Research Software Engineer in the Biological Research Data Management team (BioRDM) at the University of Edinburgh.
Advanced Programmes list for this Data file with search and filtering
The Centre for Engineering Biology is the University of Edinburgh's research organisation in interdisciplinary, Synthetic and Systems Biology, founded in 2023 as the successor to SynthSys, itself founded in 2012 as the successor to the Centre for Systems Biology at Edinburgh (CSBE). CSBE was newly founded in 2007. The Centre for Engineering Biology is a hub organisation that links across multiple, major funding awards, including an Engineering Biology Mission Hub, and EPSRC C-loop.
Projects: Millar group, PHYTOCAL: Phytochrome Control of Resource Allocation and Growth in Arabidopsis and in Brassicaceae crops, TiMet, POP - the Parameter Optimisation Problem, Regulation of flowering time in natural conditions, PlaSMo model repository, BioDare1
Web page: https://biology.ed.ac.uk/centre-engineering-biology
Advanced Projects list for this Data file with search and filtering
Experiment data previously hosted on the original version of BioDare (biodare.ed.ac.uk).
Programme: Centre for Engineering Biology (prev. SynthSys)
Public web page: Not specified
Advanced Investigations list for this Data file with search and filtering
Collection of experiments created by Chew Yin Hoon on the original BioDare and automatically transferred to FAIRDOM Hub.
Submitter: Daniel Thedie
Studies: Chew et al. (2022)
Advanced Studies list for this Data file with search and filtering
The Arabidopsis Framework Model version 2 predicts the organism-level effects of circadian clock gene mis-regulation
Chew et al. (2022)
DOI: 10.1093/insilicoplants/diac010
Submitter: Daniel Thedie
Investigation: Chew Yin Hoon
Advanced Assays list for this Data file with search and filtering
Effects of GA on clock in WT and prr9prr7
| Property | Value |
|---|---|
| BioDare ID | 3838 |
| Author | Daniel Seaton |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
Purpose
To test whether GA has any effect on circadian clock period in the WT, and whether this effect is altered in the prr9prr7 mutant.
Comments
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Chew Yin Hoon
Study: Chew et al. (2022)
