Causal Extraction from Reactome
Extraction of causalities from transcription and translation reactions from the Reactome pathway database.
SEEK ID: https://fairdomhub.org/assays/1234
Modelling analysis
Projects: Colosys
Investigation: WP1: Creation of an integrated and curated cancer knowledge commons
Study: Deliverable 1.3: Causal cellular signalling statement repository
Assay position:
Biological problem addressed: Biological Network Analysis
Organisms: No organisms
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Created: 30th Jan 2020 at 13:02
Last updated: 30th Jan 2020 at 13:06
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https://orcid.org/0000-0003-4639-4431
The DrugLogics initiative comprises a number of different subprojects, all geared towards the development of personalised medicine, or precision medicine
Projects: CausalDB, Colosys, Crossover Research 2.0, NTNU Health Druglogics
Web page: http://druglogics.eu/
The COLOSYS project aims to develop a deeper understanding of colon cancer networks and convert them into computer models with which it will be better to predict response to treatment. The combination of computational, experimental and clinical testing will provide understanding of drug resistance mechanisms, and allow personalised treatment of colon cancer.
Programme: Druglogics
Public web page: http://www.colosys.org/
The objectives of WP1 within the colosys project are:
- Produce resources of data and information that will be used for the identification of CC driver genes (WP2) and for the construction and configuration of computational models of cancer-related biological processes (WP2 and WP3)
- Integrate information from public patient data and cancer cell line data repositories with information from project specific clinical and model data
- Convert information from public cellular signalling databases ...
A repository of causal cellular signalling statement
Submitter: Vasundra Toure
Investigation: WP1: Creation of an integrated and curated canc...
Assays: Causal Extraction from Reactome
The causal interactions service provides the extracted data of causality from Reactome database.
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