SOPs

What is a SOP?

4 SOPs visible to you, out of a total of 4

In solution digestion part

SysMetEx

Aceton precipitation and protein digestion for proteomic workflow

Creators: Malte Herold, Mohamed El Hajjami

Submitter: Malte Herold

Investigations: SysMetEx - Dataset collection

Studies: Biofilms on chalcopyrite grains, Continuous cultures, Planktonic cells

Assays: Proteomics rawdata, Proteomics rawdata, Proteomics rawdata

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Created: 12th Feb 2020 at 12:47, Last updated: 12th Feb 2020 at 12:50

SOP - RNA/Protein sampling for continuous culture

SysMetEx

steps conducted to pellet cells for RNA and protein extraction

Creator: Stephan Christel

Submitter: Stephan Christel

Investigations: Multi -omics reveal lifestyle of acidophile, mi..., SysMetEx - Dataset collection

Studies: Continuous cultures, Omics_data_analysis

Assays: Experimental methods, Proteomics rawdata, RNAseq rawdata

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Created: 18th Mar 2015 at 14:51, Last updated: 12th Feb 2020 at 08:31

Sample Identification Code

SysMetEx

This file describes the naming system used to uniquely identify samples

Creator: Stephan Christel

Submitter: Stephan Christel

Investigations: SysMetEx - Dataset collection

Studies: Biofilms on chalcopyrite grains, Continuous cultures, Planktonic cells

Assays: Proteomics rawdata, Proteomics rawdata, Proteomics rawdata, RNAseq rawdata, RNAseq rawdata, RNAseq rawdata

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Created: 18th Sep 2015 at 09:48, Last updated: 6th Feb 2020 at 16:37

003 Biomolecular Extractions from LAO (Qiagen AllPrep)

SysMetEx

Protocol for the extraction of biomolecules (DNA,RNA,protein,metabolties) from the same sample. Originally intended for lipid accumulating organisms (LAO) from wastewater treatment plant samples. So far succesfully used for pelleted cells from planktonic cultures.

Creator: Malte Herold

Submitter: Malte Herold

Investigations: Multi -omics reveal lifestyle of acidophile, mi..., SysMetEx - Dataset collection

Studies: Continuous cultures, Omics_data_analysis, Planktonic cells

Assays: Experimental methods, Proteomics rawdata, Proteomics rawdata, RNAseq rawdata, RNAseq rawdata

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Created: 22nd May 2015 at 09:20, Last updated: 6th Feb 2020 at 16:36

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