Assay: _A_03.2_components
Short Name: 03.2_components
Assay Class: DRY
Assay Type: components
Title: Components: tr2aacds headers, cdhit-2d
Description: Components: tr2aacds headers, cdhit-2d; post-filtering redefinition of paralogue clusters
pISA Assay creation date: 2019-10-22
pISA Assay creator: Ziva Ramsak
Phenodata: None
Featuredata:
Data:
Investigation: _I_STRT
Study: _S_03_stCuSTr
Organisms: Solanum tuberosum
Models: No Models
SOPs: No SOPs
Data files: /input/input.tar, /intermediate_4_cdhit-2d.tar.gz, /output/output.tar, /scripts/scripts.tar
_p_stRT/_I_STRT
pipeline
Creators: Maja Zagorscak, Marko Petek
Submitter: Maja Zagorscak
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Supplementary Table S1 - Detailed sample information table used to generate the de novo transcriptome assemblies.
Raw and processed reads summary.
Layer _p_stRT/_I_STRT/ _S_01_sequences/reports
Creators: Maja Zagorscak, Marko Petek
Submitter: Maja Zagorscak
Abstract (Expand)
Authors: Marko Petek, Maja Zagorščak, Živa Ramšak, Sheri Sanders, Elizabeth Tseng, Mohamed Zouine, Anna Coll, Kristina Gruden
Date Published: No date defined
Publication Type: Not specified
DOI: 10.1101/845818
Citation: Cultivar-specific transcriptome and pan-transcriptome reconstruction of tetraploid potato
Presented by Ron Henkel at SySMO PALs meeting 29-30 November 2012 in Heidelberg
Creator: Ron Henkel
Submitter: Olga Krebs
_p_stRT/_I_STRT/_S_01_sequences
Creators: Maja Zagorscak, Marko Petek
Submitter: Maja Zagorscak
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
_p_stRT/_I_STRT/_S_01_sequences
Creators: Maja Zagorscak, Marko Petek
Submitter: Maja Zagorscak
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
_p_stRT/_I_STRT/_S_01_sequences
Creators: Maja Zagorscak, Marko Petek
Submitter: Maja Zagorscak
Investigations: No Investigations
Studies: No Studies
Assays: No Assays