Assay: _A_03.2_components
Short Name: 03.2_components
Assay Class: DRY
Assay Type: components
Title: Components: tr2aacds headers, cdhit-2d
Description: Components: tr2aacds headers, cdhit-2d; post-filtering redefinition of paralogue clusters
pISA Assay creation date: 2019-10-22
pISA Assay creator: Ziva Ramsak
Phenodata: None

DOI: 10.15490/fairdomhub.1.assay.1171.1

Created at: 26th Nov 2019 at 12:10



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  • scripts.tar


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Cultivar-specific transcriptome and pan-transcriptome reconstruction of tetraploid potato

Background: Although the reference genome of Solanum tuberosum group Phureja double-monoploid (DM) clone is available, knowledge on the genetic diversity of the highly heterozygous tetraploid group Tuberosum, representing most cultivated varieties, remains largely unexplored. This lack of knowledge hinders further progress in potato research and its subsequent applications in breeding.
Results: For the DM genome assembly, two only partially-overlapping gene models exist differing in a unique set


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MD5: 4312156fbbb545aa6f541f2713383c51

SHA1: 231f2fdead536d92962837de523d5932c507652a

Zagorscak, M., & Ramsak, Z. (2019). _A_03.2_components. FAIRDOMHub. http://doi.org/10.15490/FAIRDOMHUB.1.ASSAY.1171.1
Snapshot 1 (26th Nov 2019) DOI

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Created: 26th Nov 2019 at 12:10

Last updated: 26th Nov 2019 at 12:15

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