The COVID-19 disease has plagued over 110 countries and has resulted in over 4,000 deaths within 10 weeks. We compare the interaction between the human ACE2 receptor and the SARS-CoV-2 spike protein with that of other pathogenic coronaviruses using molecular dynamics simulations. SARS-CoV, SARS-CoV-2, and HCoV-NL63 recognize ACE2 as the natural receptor but present a distinct binding interface to ACE2 and a different network of residue-residue contacts. SARS-CoV and SARS-CoV-2 have comparable binding affinities achieved by balancing energetics and dynamics. The SARS-CoV-2–ACE2 complex contains a higher number of contacts, a larger interface area, and decreased interface residue fluctuations relative to SARS-CoV. These findings expose an exceptional evolutionary exploration exerted by coronaviruses toward host recognition. We postulate that the versatility of cell receptor binding strategies has immediate implications on therapeutic strategies.
SEEK ID: https://fairdomhub.org/publications/467
DOI: 10.1101/2020.03.10.986398
Projects: COVID-19 Disease Map
Publication type: Tech report
Citation: biorxiv;2020.03.10.986398v1,[Preprint]
Date Published: 12th Mar 2020
URL: http://biorxiv.org/lookup/doi/10.1101/2020.03.10.986398
Registered Mode: imported from a bibtex file
Views: 1907
Created: 8th Apr 2020 at 20:13
Last updated: 8th Dec 2022 at 17:26
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