Assays

2 Assays visible to you, out of a total of 4

BioDare1

SDtoLD 260410

Property	Value
BioDare ID	13982031569136
Author	Laura Dixon
Institution	University of Edinburgh
License	CC_BY

Description

pTOC plate 0683 pCAB plate0684 LHY plate 0685 control plate 0686 TOC plate0687 pLHY plate 0688

Purpose

Re-entrainment dynamics during the transition between light:dark cycles with different photoperiods, comparing Arabidopsis thaliana and Ostreococcus tauri. This expt in O. tauri ...

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Dixon Laura

Study: Dixon et al. (2014)

Organisms: Ostreococcus tauri

SOPs: No SOPs

Data files: BioDare_metadata, LHY 0685 normalised, Ot data summary for BioDare 2014 v3.1, Readme, STANDARD_DATAFILE.2, STANDARD_RAWDATAFILE.2, Sample_list, TOC normalised, control plate 0686Derandomized, pCAB plate0684Derandomized, pLHY normalised, pTOC 0683 normalised, summary

Snapshots: No snapshots

Created: 18th Jun 2026 at 12:55, Last updated: 18th Jun 2026 at 12:59

Estimation of rates of translation and turnover from proteomics datasets

Millar group, TiMet

Data and Python scripts to run the analysis of literature data that estimates rates of protein synthesis in the light and dark, and overall rates of protein turnover, in Cyanothece and Ostrecoccus tauri.

Submitter: Daniel Seaton

Biological problem addressed: Model Analysis Type

Investigation: Photoperiodic control of the Arabidopsis proteo...

Study: Proteome and translation rate data for the Ostr...

Organisms: Ostreococcus tauri

Models: Estimation of translation and turnover - python...

SOPs: No SOPs

Data files: Aryal et al, 2011, metabolic labelling of Cyano..., Calculated rates of protein degradation in Cyan..., Calculated rates of protein degradation in Ostr..., Calculated rates of protein synthesis in the li..., Calculated rates of protein synthesis in the li..., Martin et al, 2012, Ostreococcus N15 labelling ...

Snapshots: No snapshots

Created: 15th Jan 2018 at 07:24, Last updated: 20th Feb 2018 at 22:03

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SDtoLD 260410

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