Models of glycolysis in T. brucei with different levels of permeability of the glycosomes, and with or without cytosolic activities of the glycolytic enzymes. Version 2
SBML models without activity of the glycolytic enzymes in the cytosol:
Glycolysis_noActivityInCytosol_1a.xml Model 1a Glycolysis_noActivityInCytosol_1b.xml Model 1b Glycolysis_noActivityInCytosol_2.xml Model 2 Glycolysis_noActivityInCytosol_3.xml Model 3 Glycolysis_noActivityInCytosol_4.xml Model 4 Glycolysis_noActivityInCytosol_5.xml Model 5 Glycolysis_noActivityInCytosol_6.xml Model 6
SBML models with activity of the glycolytic enzymes in the cytosol:
Glycolysis_withActivityInCytosol_1a.xm Model 1a Glycolysis_withActivityInCytosol_1b.xm Model 1b Glycolysis_withActivityInCytosol_2.xml Model 2 Glycolysis_withActivityInCytosol_3.xml Model 3 Glycolysis_withActivityInCytosol_4.xml Model 4 Glycolysis_withActivityInCytosol_5.xml Model 5 Glycolysis_withActivityInCytosol_6.xml Model 6
Parameters:
parameter_sets.tab 100,000 parameter sets: one parameter per column, one set per line.
SEEK ID: https://fairdomhub.org/models/107?version=2
1 item is associated with this Model:-
supplementary_dataset.zip (Zip file - 74.5 MB)
Organism: Trypanosoma brucei
Model type: Ordinary differential equations (ODE)
Model format: SBML
Execution or visualisation environment: Not specified
Model image: No image specified
Export PNG
Creators and Submitter
Views: 4481 Downloads: 248
Created: 3rd Apr 2013 at 16:05
Last updated: 16th May 2013 at 14:56
TagsThis item has not yet been tagged.
AttributionsNone
Version History
Version 2 (latest) Created 16th May 2013 at 14:54 by Fiona Achcar
No revision comments
Related items
Projects: SilicoTryp
Institutions: University of Glasgow
SysMO is a European transnational funding and research initiative on "Systems Biology of Microorganisms".
The goal pursued by SysMO was to record and describe the dynamic molecular processes going on in unicellular microorganisms in a comprehensive way and to present these processes in the form of computerized mathematical models.
Systems biology will raise biomedical and biotechnological research to a new quality level and contribute markedly to progress in understanding. Pooling European research ...
Projects: BaCell-SysMO, COSMIC, SUMO, KOSMOBAC, SysMO-LAB, PSYSMO, SCaRAB, MOSES, TRANSLUCENT, STREAM, SulfoSys, SysMO DB, SysMO Funders, SilicoTryp, Noisy-Strep
Web page: http://sysmo.net/
The SilicoTryp project aims at the creation of a “Silicon Trypanosome”, a comprehensive, experiment-based, multi-scale mathematical model of trypanosome physiology. Trypanosomes are blood-stream parasites transmitted by tsetse flies; they cause African sleeping sickness in humans and livestock. Currently available drugs have severe side effects, and the parasites are rapidly developing resistance. In this project, we collect a wide range of new experimental data on the parasite in its various ...
Programme: SysMO
Public web page: http://silicotryp.ibls.gla.ac.uk/wiki/Main_Page
