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The conditions are Control: Control (no stimulation, no TLR8 inhibition) Inhib: TLR8 inhibition Msm: Methanobrevibacter smithii stimulation Mst: Methanosphaera stadtmanae stimulation Msm_Inhib: Methanobrevibacter smithii stimulation and TLR8 inhibition Mst_Inhib: Methanosphaera stadtmanae stimulation and TLR8 inhibition
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Created: 22nd Jul 2025 at 09:48
Last updated: 29th Sep 2025 at 12:25

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Projects: Group Data Science, Group Microbial Interface Biology, Core Facility Fluorescence Cytometry, Targeting the immunoproteasome: Analyzing the biological effects of specific versus pan inhibition, Macrophage and neutrophil redox proteome in infection with Mycobacterium tuberculosis, Methylation differences during respiratory infection, Lipid droplet formation and dynamics in murine macrophages, Implementation of Nanopore Sequencing for Detection of Treatment Induced Transcriptomic and Epitranscriptomic Changes in Leukaemic Tumour Models, Revisiting mutational resistance to ampicillin and cefotaxime in Haemophilus influenzae, OMICS of vascular smooth muscle cells under oxidative stress, Lung health related PGS and GWAS, Archaean stimulation of human primary PBMCs and PBMCs monocytes
Institutions: Forschungszentrum Borstel

Expertise: Bioinformatics, Genomics, Transcriptomics
Projects: Group Data Science, Group Microbial Interface Biology, Core Facility Fluorescence Cytometry, Targeting the immunoproteasome: Analyzing the biological effects of specific versus pan inhibition, Macrophage and neutrophil redox proteome in infection with Mycobacterium tuberculosis, Methylation differences during respiratory infection, Lipid droplet formation and dynamics in murine macrophages, OMICS of vascular smooth muscle cells under oxidative stress, Lung health related PGS and GWAS, Archaean stimulation of human primary PBMCs and PBMCs monocytes
Web page: https://fz-borstel.de
Organisms: Not specified
Submitter: Inken Wohlers
Investigation: Illumina RNA sequencing of archaean stimulated ...
Snapshots: No snapshots
Submitter: Inken Wohlers
Investigation: Illumina RNA sequencing of archaean stimulated ...
Assays: Comparison of all conditions
Snapshots: No snapshots
Submitter: Inken Wohlers
Biological problem addressed: Model Analysis Type
Investigation: Illumina RNA sequencing of archaean stimulated ...
Study: Transcriptome profiling
Organisms: No organisms
Models: No Models
SOPs: No SOPs
Data files: Quarto document with R code for transcriptome p...
Snapshots: No snapshots
Submitter: Inken Wohlers
Biological problem addressed: Model Analysis Type
Investigation: Illumina RNA sequencing of archaean stimulated ...
Study: Differential expression
Organisms: No organisms
Models: No Models
SOPs: No SOPs
Data files: Main workflow results as HTML report, Quality report using MultiQC, Workflow results: plots, Workflow results: tables
Snapshots: No snapshots
Creator: Inken Wohlers
Submitter: Inken Wohlers
Investigations: Illumina RNA sequencing of archaean stimulated ...
Studies: Differential expression
Assays: Comparison of all conditions
Creator: Inken Wohlers
Submitter: Inken Wohlers
Investigations: Illumina RNA sequencing of archaean stimulated ...
Studies: Differential expression
Assays: Comparison of all conditions
Creator: Inken Wohlers
Submitter: Inken Wohlers
Investigations: Illumina RNA sequencing of archaean stimulated ...
Studies: Differential expression
Assays: Comparison of all conditions
Creator: Inken Wohlers
Submitter: Inken Wohlers
Investigations: Illumina RNA sequencing of archaean stimulated ...
Studies: Differential expression
Assays: Comparison of all conditions
Creator: Inken Wohlers
Submitter: Inken Wohlers
Investigations: Illumina RNA sequencing of archaean stimulated ...
Studies: Transcriptome profiling