Assays

What is an Assay?

165 Assays visible to you, out of a total of 165

Single Cell Expression Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: 1 hidden item

Organisms: No organisms

SOPs: 1 hidden item

Data files: 1 hidden item

Snapshots: No snapshots

Created: 28th Mar 2025 at 17:45, Last updated: 28th Mar 2025 at 18:55

Library Creation - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: 1 hidden item

Organisms: No organisms

SOPs: No SOPs

Data files: 2 hidden items

Snapshots: No snapshots

Created: 28th Mar 2025 at 17:40, Last updated: 28th Mar 2025 at 18:54

Tissue Collection - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: 1 hidden item

Organisms: No organisms

SOPs: 1 hidden item

Data files: 2 hidden items

Snapshots: No snapshots

Created: 28th Mar 2025 at 17:37, Last updated: 28th Mar 2025 at 18:51

Patient Visit - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: 1 hidden item

Organisms: No organisms

SOPs: 2 hidden items

Data files: 2 hidden items

Snapshots: No snapshots

Created: 28th Mar 2025 at 17:35, Last updated: 28th Mar 2025 at 18:47

All Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: 1 hidden item

Organisms: No organisms

SOPs: No SOPs

Data files: No Data files

Snapshots: No snapshots

Created: 28th Mar 2025 at 17:54

All Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systematic deconstruction of myeloid cell signa...

Organisms: No organisms

SOPs: No SOPs

Data files: Systematic Granuloma - All Metadata_v1.xlsx

Snapshots: No snapshots

Created: 28th Mar 2025 at 17:10, Last updated: 28th Mar 2025 at 17:26

Single Cell Expression Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systematic deconstruction of myeloid cell signa...

Organisms: No organisms

SOPs: P.BRY-250325-V1_systematic_SEQ_analysis.docx

Data files: samples-publish_250326_A.SCXP.xlsx, samples-publish_250326_D.SEQ.xlsx

Snapshots: No snapshots

Created: 25th Mar 2025 at 20:39, Last updated: 28th Mar 2025 at 17:24

Gene Expression Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systematic deconstruction of myeloid cell signa...

Organisms: No organisms

SOPs: P.BRY-250325-V1_systematic_SEQ_analysis.docx

Data files: samples-publish_250326_A.GEX.xlsx, samples-publish_250326_D.SEQ.xlsx

Snapshots: No snapshots

Created: 25th Mar 2025 at 20:40, Last updated: 28th Mar 2025 at 17:18

Short Read Sequencing - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systematic deconstruction of myeloid cell signa...

Organisms: No organisms

SOPs: P.BRY-241219-V1_HMDM-Protocol.docx, P.BRY-250327-V1_scRNAseq.docx

Data files: samples-publish_250326_D.SEQ.xlsx, samples-publish_250326_DNA.xlsx

Snapshots: No snapshots

Created: 25th Mar 2025 at 20:38, Last updated: 28th Mar 2025 at 17:10

Immunohistochemistry - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systematic deconstruction of myeloid cell signa...

Organisms: No organisms

SOPs: No SOPs

Data files: No Data files

Snapshots: No snapshots

Created: 28th Mar 2025 at 17:08

Library Creation - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systematic deconstruction of myeloid cell signa...

Organisms: No organisms

SOPs: P.BRY-241219-V1_HMDM-Protocol.docx, P.BRY-250327-V1_scRNAseq.docx

Data files: samples-publish_250326_CEL.xlsx, samples-publish_250326_DNA.xlsx, samples-publish_250326_TIS.xlsx

Snapshots: No snapshots

Created: 25th Mar 2025 at 20:37, Last updated: 28th Mar 2025 at 17:06

Cell Isolation - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systematic deconstruction of myeloid cell signa...

Organisms: No organisms

SOPs: P.BRY-241219-V1_HMDM-Protocol.docx

Data files: samples-publish_250326_CEL.xlsx, samples-publish_250326_TIS.xlsx

Snapshots: No snapshots

Created: 25th Mar 2025 at 20:35, Last updated: 28th Mar 2025 at 17:00

Tissue Collection - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systematic deconstruction of myeloid cell signa...

Organisms: No organisms

SOPs: P.BRY-241219-V1_HMDM-Protocol.docx, P.BRY-250327-V1_NHP_Protocol.docx

Data files: samples-publish_250326_PAV.xlsx, samples-publish_250326_TIS.xlsx

Snapshots: No snapshots

Created: 25th Mar 2025 at 20:34, Last updated: 28th Mar 2025 at 16:55

Patient Visit - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systematic deconstruction of myeloid cell signa...

Organisms: No organisms

SOPs: P.BRY-250327-V1_NHP_Protocol.docx

Data files: samples-publish_250326_NHP.xlsx, samples-publish_250326_PAT.xlsx, samples-publish_250326_PAV.xlsx

Snapshots: No snapshots

Created: 25th Mar 2025 at 20:32, Last updated: 28th Mar 2025 at 16:47

Short Read Sequencing - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Comparable Non-canonical T cell responses are a...

Organisms: No organisms

SOPs: P.SAS-240923-V1_RSTR_scRNA-CITESEQ.docx

Data files: samples-publishMP_RSTR-D.SEQ.xlsx, samples-publishMP_RSTR-DNA.xlsx

Snapshots: No snapshots

Created: 19th Sep 2024 at 18:45, Last updated: 25th Feb 2025 at 20:39

CITESEQ Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Comparable Non-canonical T cell responses are a...

Organisms: No organisms

SOPs: P.SAS-240923-V1_RSTR_scRNA-CITESEQ.docx

Data files: samples-publishMP_RSTR-A.SCXP.xlsx, samples-publishMP_RSTR-D.SEQ.xlsx

Snapshots: No snapshots

Created: 19th Sep 2024 at 18:47, Last updated: 25th Feb 2025 at 20:39

Model Validation - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Comparable Non-canonical T cell responses are a...

Organisms: No organisms

SOPs: P.SAS-241009-V1_TransCompR-Protocol.docx

Data files: samples-publishMP_RSTR-MDL.xlsx

Snapshots: No snapshots

Created: 19th Sep 2024 at 18:48, Last updated: 25th Feb 2025 at 20:39

Flow Cytometry - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Comparable Non-canonical T cell responses are a...

Organisms: No organisms

SOPs: P.SAS-220203-V1_Flow-protocol-for-SEEK.docx

Data files: samples-publishMP_RSTR-ABP.xlsx, samples-publishMP_RSTR-AB_FLOW.xlsx, samples-publishMP_RSTR-CEL.xlsx, samples-publishMP_RSTR-D.FCS.xlsx, samples-publishMP_RSTR-D.FLOW.xlsx, samples-publishMP_RSTR-TIS.xlsx

Snapshots: No snapshots

Created: 19th Sep 2024 at 18:41, Last updated: 25th Feb 2025 at 20:39

Flow Cytometry Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Comparable Non-canonical T cell responses are a...

Organisms: No organisms

SOPs: P.SAS-240923-V1_RSTR_Flow_Analysis.docx

Data files: samples-publishMP_RSTR-A.FLOW.xlsx, samples-publishMP_RSTR-D.FLOW.xlsx

Snapshots: No snapshots

Created: 19th Sep 2024 at 18:43, Last updated: 25th Feb 2025 at 20:39

Library Prep - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Comparable Non-canonical T cell responses are a...

Organisms: No organisms

SOPs: P.SAS-240923-V1_RSTR_scRNA-CITESEQ.docx

Data files: samples-publishMP_RSTR-DNA.xlsx

Snapshots: No snapshots

Created: 19th Sep 2024 at 18:44, Last updated: 25th Feb 2025 at 20:39

Pathogen Challenge and Antibody Depletion - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Comparable Non-canonical T cell responses are a...

Organisms: No organisms

SOPs: P.SAS-240923-V1_RSTR_Mice_SOP.docx

Data files: samples-publishMP_RSTR-AB_DEPL.xlsx, samples-publishMP_RSTR-BAC.xlsx, samples-publishMP_RSTR-MUS.xlsx

Snapshots: No snapshots

Created: 19th Sep 2024 at 18:38, Last updated: 25th Feb 2025 at 20:39

Tissue Collection - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Comparable Non-canonical T cell responses are a...

Organisms: No organisms

SOPs: P.SAS-240923-V1_RSTR_Mice_SOP.docx

Data files: samples-publishMP_RSTR-MUS.xlsx, samples-publishMP_RSTR-TIS.xlsx

Snapshots: No snapshots

Created: 19th Sep 2024 at 18:39, Last updated: 25th Feb 2025 at 20:39

Cell Isolation - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Comparable Non-canonical T cell responses are a...

Organisms: No organisms

SOPs: P.SAS-240827-V1_RSTR_BMDM_protocol.docx

Data files: samples-publishMP_RSTR-CEL.xlsx

Snapshots: No snapshots

Created: 19th Sep 2024 at 18:40, Last updated: 25th Feb 2025 at 20:39

All Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: No SOPs

Data files: All Metadata - Training Data.xlsx, All Metadata - Validation Data.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:37, Last updated: 5th Feb 2025 at 22:49

PCR: Validation Data - Data Attached

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: P.SAS-241121-V1_qPCR-Protocol.docx

Data files: 111224_PCR.xlsx, samples-publish_KPRF_D.PCR.xlsx, samples-publish_KPRF_SAS_RNA.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:33, Last updated: 5th Feb 2025 at 22:46

Bacterial Survivability Restriction Assay: Validation Data - Data Attached

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: P.SAS-241120-V1_BSRA-Protocol.docx

Data files: 111224_BRSA.xlsx, samples-publish_KPRF_SAS_BAC.xlsx, samples-publish_KPRF_SAS_CEL.xlsx, samples-publish_KPRF_SAS_D.BSRA.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:34, Last updated: 5th Feb 2025 at 22:44

TransCompR Cross Species Modeling - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish_KPRF_A.GEX.xlsx, samples-publish_KPRF_SAS_A.GEX.xlsx, samples-publish_TransCompR_MDL.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:37, Last updated: 5th Feb 2025 at 22:31

Gene Expression Analysis: Validation Data - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: P.SAS-241121-V1_RNAseq-Analysis-Protocol.docx

Data files: samples-publish_KPRF_SAS_A.GEX.xlsx, samples-publish_KPRF_SAS_D.SEQ.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:36, Last updated: 5th Feb 2025 at 22:25

Short Read Sequencing: Validation Data - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: P.SAS-241120-V1_RNAseq-Protocol.docx

Data files: samples-publish_KPRF_SAS_D.SEQ.xlsx, samples-publish_KPRF_SAS_DNA.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:36, Last updated: 5th Feb 2025 at 21:48

Library Prep: Validation Data - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: P.SAS-241120-V1_RNAseq-Protocol.docx

Data files: samples-publish_KPRF_SAS_DNA.xlsx, samples-publish_KPRF_SAS_RNA.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:35, Last updated: 5th Feb 2025 at 20:46

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