Assays

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4 Assays visible to you, out of a total of 4

RNAseq

SysMetEx

RNAseq data for L.ferriphilum samples

Submitter: Malte Herold

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Multi -omics reveal lifestyle of acidophile, mi...

Study: Omics_data_analysis

Organisms: No organisms

SOPs: No SOPs

Data files: LF_RNAseq_TPM_continuous, LF_RNAseq_TPM_mineral, LF_RNAseq_rawdata, LF_deseq_comparison, LF_omics_analysis, LF_omics_combined_Table

Snapshots: No snapshots

Created: 19th Jul 2017 at 23:51, Last updated: 8th Nov 2017 at 14:21

Proteomics

SysMetEx

Proteomics data for L.ferriphilum samples (continuous and with mineral)

Submitter: Malte Herold

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Multi -omics reveal lifestyle of acidophile, mi...

Study: Omics_data_analysis

Organisms: No organisms

SOPs: No SOPs

Data files: LF_LFQ_comparison_ttest, LF_omics_analysis, LF_omics_combined_Table, LF_proteomics_LFQs_continuous, LF_proteomics_LFQs_mineral, LF_proteomics_LFQs_mineral_scaled, LF_proteomics_continuous_scaled, LF_proteomics_maxquant_perseus_filtered, LF_proteomics_maxquant_perseus_unfiltered, Perseus workflow t-test, Proteomics data comparing LXX cultures cultivat...

Snapshots: No snapshots

Created: 19th Jul 2017 at 23:59, Last updated: 8th Nov 2017 at 14:21

Genomics

SysMetEx

Genomics data, for L.ferriphilum Sequencing of the genome and functional annotation

Submitter: Malte Herold

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Multi -omics reveal lifestyle of acidophile, mi...

Study: Omics_data_analysis

Organisms: No organisms

SOPs: No SOPs

Data files: Functional_annotation_repository, LF_functional_annotation_gbk, LF_omics_combined_Table, LF_sequencing_data

Snapshots: No snapshots

Created: 20th Jul 2017 at 00:04, Last updated: 8th Nov 2017 at 14:21

Experimental methods

SysMetEx

Collection for experimental SOPs

Submitter: Malte Herold

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Multi -omics reveal lifestyle of acidophile, mi...

Study: Omics_data_analysis

Organisms: No organisms

SOPs: 003 Biomolecular Extractions from LAO (Qiagen A..., SOP - Bioleaching in flasks (LNU), SOP - RNA/Protein sampling for continuous culture

Data files: No Data files

Snapshots: No snapshots

Created: 20th Jul 2017 at 00:12, Last updated: 8th Nov 2017 at 14:21

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