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Version 1 (earliest) Created 17th Apr 2021 at 16:59 by Xiaokang Zhang
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Projects: Systems toxicology of Atlantic cod
Institutions: University of Bergen
https://orcid.org/0000-0003-4684-317XThe goal of the dCod-project is to combine the competencies in environmental toxicology, biology, bioinformatics and mathematics across the traditional department boundaries, to create a deeper understanding of cods' adaptations and reactions to stressors in the environment. Building on the thoroughly studies and mapping of the cod genome at UiO and the long research traditions on cod at the Department of Biology at UiB, the dCod project will expand our knowledge with methods based on genomics; ...
Projects: Systems toxicology of Atlantic cod
Web page: http://dcod.no
Coastal zones and oceans constitute an essential fundament for Norway’s history as well as current economy, providing ecosystem services for fisheries, aquaculture, transport, tourism, and recreation. The petroleum activities in Norwegian waters have been crucial for Norway’s financial growth and in financing the Norwegian welfare state. As the pressure on the oceans continuously increases, both the petroleum industry and the seafood industries have acknowledged that awareness and actions are ...
Programme: dCod 1.0: decoding systems toxicology of cod
Public web page: http://www.uib.no/en/dcod
Organisms: Gadus morhua
Interspecies differences in sensitivity to chemical exposures pose a great challenge in toxicological risk assessments. How an organism copes with chemicals is largely determined by the genes and proteins that collectively function to defend against, detoxify and eliminate chemical stressors. This integrative network includes receptors and transcription factors, biotransformation enzymes, transporters, antioxidants, and metal- and heat-responsive genes, and is collectively known as the chemical ...
Submitter: Sofie Söderström
Investigation: 1 hidden item
Assays: Chemical defensome genes for five fish species, Exposure response of defensome genes, Expression of defensome genes in early development of fish
Snapshots: Snapshot 1
To study the defensome genes' expression in early developmental stages of zebrafish and stickleback. Souce code and relevant files can be found on GitHub: https://github.com/zhxiaokang/fishDefensome/tree/main/developmentalStages
Submitter: Xiaokang Zhang
Biological problem addressed: Stress response/Adaptation
Investigation: 1 hidden item
Organisms: No organisms
Models: No Models
SOPs: No SOPs
Data files: Defensome gene expression in early develepmenta..., Defensome gene expression in early develepmenta..., Gene lists for clusters in developmental stages..., Gene lists for clusters in developmental stages...
Snapshots: Snapshot 1, Snapshot 2