Data files
What is a Data file?Filters
Query
Created At
Updated At
Tag
data1512
pISA-tree916
pISA351
demo246
Docking46
Enzyme39
isothermal titration calorimetry33
Induced Fit29
caffeine28
Pharmacokinetics28
Proteomics25
Gene ontology24
ODE24
biochemical network23
Binding22
biological pathways22
protein interaction18
Drug discovery16
Metabolomics13
Kinetics12
Data Management9
Multiple Injection8
Transcriptomics8
UV-Vis Spectrophotometry8
Arabidopsis7
iTRAQ7
MRI7
Sulfolobus solfataricus7
acetic acid6
chemostat6
KEGG6
Mass spectrometry6
protein networks6
Thermodynamics6
9.4T5
Bacillus subtilis5
Bruker5
Homology modeling5
PVL60%5
Systems Biology5
betweenness4
Bioinformatics4
biomass4
centrality4
chemical markup language4
Data Integration4
deep eutectic solvents4
degree4
drug design4
hub4
Metabolic Engineering4
Modelling4
Protein4
Python4
Selwyn test4
Specific Activity4
Validation4
70mM3
ADMET3
Arrhenius and Vogel–Fulcher–Tammann-Hesse models3
development3
dynamic light scattering3
enzyme kinetics3
FAIR3
fair data3
fibroblasts3
Homogeneity of Sample3
KEGG2SBTOOLBOX23
LC-MS/MS3
metadata3
microarray3
Pals3
pathway3
POD13
pulse3
Reactome3
recurrent Single Injection3
sc-SynO3
scRNA-Seq3
secretome3
SEEK3
skin3
Workflow3
acidogenesis2
allosteric regulation2
annotation2
API2
Automated Workflow2
butyric acid2
carbon sources2
clinical studies2
community2
Correlation analysis2
Cytoscape2
Data analysis2
data retrieval2
environmental conditions2
Epidemiology2
FBA2
gene annotation2
HPLC2
in silico2
ISA2
literature2
M. pneumoniae2
Matlab2
Microbiology2
mRNA decay2
public health studies2
R2
RNAseq2
SBTOOLBOX22
Sequence alignment2
sequencing2
SPINE2
Taverna2
Template2
WQJR2
100mM1
50mM1
80mM1
absolute values1
aerobiosis1
Affymetrix1
amino acid1
Amino acid uptake1
anaerobic1
Arabidopsis thailana1
Arrhenius model1
biochemestry network1
Bioenergetics1
Biology1
butanol producing strain e.coli1
CAC1
chemical engineering1
Clock1
Clocks1
Clostridium1
cofactor1
coil length1
combine1
Comparative modeling1
comparison1
continuous culture1
Control Analysis1
Control Group1
COVID-191
Dark1
data and model management1
data citation1
Data Dictionary1
Data logger1
DES1
DNA methylation1
dynamic model1
electrostatics1
energy metabolism1
Enyzme Kinetics1
Enzymatic activity1
enzyme activity measurement1
enzymes1
epidemic1
Escherichia coli1
Evaluation Script1
experiment1
fair publishing1
FDJR1
feed composition1
feed switch1
figures; Tables1
fluxes1
GC-MS1
gel1
gene co-expression analysis1
gene expression1
Genomics1
Glycolysis1
Graph Analysis1
high content screen1
hplc thiol analysis1
HTML1
Illumina1
input1
intera1
interaction partner1
kcat1
Km1
l-fucose1
lactate dehydrogenase1
LC MS1
leaf area1
lepto1
light1
LXX1
Master file1
MCAD1
membrane transport1
Metabolic energies1
metabolic shift1
metabolites1
Metadata table1
mice1
Microbial Ecology1
mineral1
mitochondrial carrier1
mitochondrial transporter1
model curation1
Modeling1
Molecular Dynamics1
NAD1
NAD+ transporters1
Network Analysis1
networking1
oxygen1
PAINS1
PC1
PDB1
PFL1
PGK1
pH1
pH-shift1
phosphorylation1
PIPSA1
Plant physiology1
POD21
POD31
POD51
portal vein ligation1
Potato1
Protocol development1
PVL1
pyruvate kinase1
quenching temperature1
Raw data for thermotables1
reactions1
relative measurements1
Report1
repression1
respiration1
Rice1
RNA1
RobOKoD redesigned1
Rubisco1
SBML1
seek tutorial1
SLC25A511
solute carrier family 251
solventogenesis1
space science1
step1
Stickland reactions1
stoichiometric equation1
Stressosome1
T. brucei1
TCA1
Training Data1
transcriptiption regulation1
Transcriptome1
transformer1
transport1
tutorial1
viscosity1
vmax1
Vogel–Fulcher–Tammann-Hesse model1
workshop1
yeast1
More...
Submitter
Daniel Thedie1586
Marko Petek1267
Charles Demurjian400
Andrej Blejec249
BioData SynthSys130
Farnoush Kiyanpour120
Maja Zagorscak92
Ina Poehner62
Gudrun Gygli58
Malte Herold43
Ziva Ramsak42
Jacky Snoep36
Yi Chen35
Dawie van Niekerk31
Sahar Hassani31
Matthias König30
Karl-Heinz Herrmann30
Andrew Millar29
Dikshant Pradhan29
Karina Dale26
Lars Wöhlbrand25
Janette Alford25
Jan-Willem Veening24
Zdenka Bartosova24
Daniel Seaton24
Niels Zondervan23
Maksim Zakhartsev22
Alexey Kolodkin22
Inken Wohlers20
Olga Krebs19
Sebastian Curth19
Lorenzo Tagliazucchi19
Christoff Odendaal18
Jake Schissel17
Theresa Kouril16
Uriel Urquiza-Garcia15
Katy Wolstencroft14
Ulrike Wittig14
Pasquale Linciano14
Martijn Bekker13
Natalia Gebara13
Julia Koblitz13
Ayat Ismail13
Xiaokang Zhang12
Hans V. Westerhoff11
Praveen kumar Sappa11
Margrete Solheim11
Jacqueline Wolf11
Jon Olav Vik11
Marta Eide11
Mohamed Albadry11
Jana Kalvelage11
Juan Iglesias-Riobó11
Leif Steil10
Markus Wolfien10
Ioannis Metaxas10
Karthika Balusamy10
Helge Stark9
Yang Jin9
Runyu Liang9
James Wordsworth9
Graceline Tina Kirubakaran8
Julia Scheel8
Sarah Kirstein8
Patrick Becker8
Anette McLeod7
Andrea Rizzo7
Rohola Hosseini7
Paul Heusden6
Holger Janssen6
Wolfgang Müller6
Dong-Hyun Kim6
Hannah O'Keefe6
Anne-Marie Galow6
Sebastian Höpfl6
Katja Bettenbrock5
Sonja Steinsiek5
Ulf Liebal5
Sandra Maass5
Anna Feldman-Salit5
Jurgen Haanstra5
Thomas Rimpf5
Natalie Stanford5
Fatemeh Zamanzad Ghavidel5
Jennifer Zehner5
Gabriela Loscalzo5
Derly Andrade5
Jay Moore4
Hanna Meyer4
Abeer Fadda4
Franco du Preez4
Daniel Hönicke4
Koen van Grinsven4
Stefan Albaum4
Martin Golebiewski4
Inga Leena Angell4
Dorothee Houry4
Theresa Bender4
Karel Sedlar4
Lennart Bartels4
Leruo Keokilwe4
Iurii (Yuriy) Sheludko4
Maja Rey3
Michael Kohlstedt3
Antoine Buetti-Dinh3
Fekadu Yadetie3
Evert Bosdriesz3
Hong Yang3
Sofia Doello3
Kate Jounghyun Um3
Andi N.K.B.P Iskandar3
Kenric Lee3
Rainer Malik3
Matthew Rolfe2
Stefan Henrich2
Alejandro Leroux2
Federico Rojas2
Silvio Hering2
Araz Zeyniyev2
Quyen Nguyen2
Eivind Almaas2
Thomas Harvey2
Cornelius Erbelding2
Chloe Spalding2
Harald Kusch2
Cláudia Vicente2
Flora D'Anna2
Xiangcheng Li2
Faiz Khan2
Mojca Juteršek2
Meina Neumann-Schaal2
Ana Lobo2
Jane Davey2
Tobias Reinberger2
David Calderón-Franco2
Yashna Paul2
Taïsha Joseph-Risch2
Rene Bults2
Bas Teusink1
Vitor Martins dos Santos1
Michael Ederer1
Maike Bartholomae1
Fiona Achcar1
Antje Sieg1
John Raedts1
Wayne Aubrey1
Ron Henkel1
Fabian Grammes1
Vasundra Toure1
Magny Sidsel Thomassen1
Roel Van Driel1
Lutz Brusch1
Jasper Koehorst1
Huseyin Tas1
Mohamed El Hajjami1
Ines Heiland1
Baudoin Delépine1
Angeles Hueso-Gil1
Carsten Haupka1
DAVID RODRIGUEZ ESPESO1
Hannah Kinmonth-Schultz1
Petra Engele1
Ghadeer Mobasher1
PoLiMeR_user Martines_data1
Ahmed Hemedan1
Birger Wolter1
Maria Paola Costi1
Felix Ott1
Lukrécia Mertová1
Chris Wilson1
Sophie Klopfenstein1
Carsten Reuse1
Amatus Beyer1
Aaron Laier1
Urte Clausen1
Sören-Tobias Vital1
Shareefa AlGhamdi1
Alejandro Martínez Rey1
Daniel Meißner1
Marius Steen Dobloug1
Maithili Kalamkar1
Giulia Malpezzi1
More...
Project
BioDare11586
SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture918
TRANSLUCENT716
_p_RNAinVAL351
_p_stRT338
Hi-IMPAcTB252
PlaSMo model repository130
DKDM: Diabetic Kidney Disease Map120
MIT SRP100
DigiSal82
NMTrypI - New Medicines for Trypanosomatidic Infections76
Millar group65
MetNet61
Systems toxicology of Atlantic cod57
GenoSysFat54
SysMO-LAB52
Towards Reproducible Enzyme Modeling47
SysMetEx44
BaCell-SysMO43
MOA - Multiomics analysis of potato response to Potato virus Y (PVY) infection42
COSMIC35
EbN1 Systems Biology31
SUMO30
Multi-Scale Models for Personalized Liver Function Tests (LiSyM-MM-PLF)30
Quantifizierung des Zusammenhanges zwischen Leberperfusion und -funktion bei erweiterter Leberresektion - Ein systemmedizinischer Ansatz (QuaLiPerF)30
Consensus Hallmark Annotation29
SysMO DB26
SulfoSys - Biotec26
Noisy-Strep24
MycoSynVac - Engineering Mycoplasma pneumoniae as a broad-spectrum animal vaccine23
SulfoSys22
Whole body modelling of glucose metabolism in malaria patients22
PoLiMeR - Polymers in the Liver: Metabolism and Regulation22
OMICS of vascular smooth muscle cells under oxidative stress21
Molecular characterization and angiogenic properties of extracellular vesicles in healthy and preeclamptic amniotic fluid19
ROS detailed model for MSB manucript18
Endometriosis18
SilicoTryp17
TiMet17
iRhythmics16
Computational pathway design for biotechnological applications16
SteaPKMod15
FAIRDOM14
MIX-UP14
Diverse Metabolic Control of Phosphoglucomutases by Bisphosphorylated Sugars in Heterotrophic Bacteria14
ZucAt13
The nucleus of Prorocentrum cordatum13
Proteogneomics of Desulfobacteraceae members12
Cell4Chem11
MOSES10
CML for thermophysical properties of mixtures10
CEPOPA - Development of sustainable chemoenzymatic processes for optically pure amines from alcohols or alkynes10
Shoulders Lab10
Archaean stimulation of human primary PBMCs and PBMCs monocytes10
Materials from the Malta meeting 2-4 Sept 202610
Molecular Systems Biology9
Selective Destruction in Ageing9
SCyCode The Autotrophy-Heterotrophy Switch in Cyanobacteria: Coherent Decision-Making at Multiple Regulatory Layers8
Working Group Nicole Radde7
COVID-19 related studies and tools in Germany7
Thermodynamics7
CC-TOP7
NL-Bioimaging FAIR Metadata Templates7
Glycogen Metabolism in bacteria7
Revisiting mutational resistance to ampicillin and cefotaxime in Haemophilus influenzae7
Book on Thermodynamics, and kinetics6
Glucose metabolism in cancer cell lines6
Cancer Systems Biology Consortium (CSBC)6
Shotgun and geLC MS/MS data of clonal enrichment culture BzS16
de.NBI-SysBio5
BioZEment 2.05
MESI-STRAT5
Overexpression of microRNAs miR-25-3p, miR-185-5p and miR-132-3p in Late Onset Fetal Growth Restriction, Validation of Results and Study of the Biochemical Pathways Involved5
Supplementary Information 2 associated with the manuscript entitled " Label free Mass spectrometry proteomics reveals different pathways modulated in THP-1 cells infected with therapeutic failure and drug resistance Leishmania infantum clinical isolates"5
Virulence-related genes expression in planktonic mixed cultures of Candida albicans and non-albicans Candida species5
Thermotables for biochemistry5
STREAM4
Kinetics on the move - Workshop 20164
Colosys4
C1Pro4
NAMPT affinity4
Clostridium beijerinckii pan-genome4
Heat stress response of the red-tide dinoflagellate Prorocentrum cordatum4
Enhanced Anticancer Effect of Thymidylate Synthase Dimer Disrupters Promoting Intracellular Accumulation4
The evolution of Gene Ontology4
Controlled Carbon Loss: Threshold-Dependent Overflow Metabolism in Synechocystis4
Pro-Inflammatory Response BLE by Mmm4
Proteo-Lipidomics Serum Signatures associated with Bevacizumab response in High Grade Serous Ovarian Carcinoma4
Adaptation of heterologous cytochrome P450s to plant expression and membrane environment for improvement of biocatalytic function4
IMOMESIC3
pISA-tree3
EmPowerPutida3
Steroid biosynthesis3
Mechanism based modeling viral disease ( COVID-19 ) dynamics in human population3
nfdi4health - German National Research Data Infrastructure for Personal Health Data3
Mass spectrometry proteomics for biomarker discovery3
Scalp Acupuncture and Treadmill Training Inhibits Neuronal Apoptosis Through Activating cIAP1 in Cerebral Ischemia Rats3
Electroacupuncture preconditioning reduces oxidative stress in the acute phase of cerebral ischemia-reperfusion in rats by regulating iron metabolism pathways3
Measurement of Fisheries Provisioning Services and its Pressure to Support Sustainability of Fisheries in The Jatigede Reservoir, Indonesia3
Munich Cluster for Systems Neurology3
Thermotables3
Defining the role of fibroblasts in skin expansion3
WineSys2
FAIRDOM user meeting2
WG Infrastructure for Translational Research2
Mathematical modelling of the antibiotic-induced morphological transition of Pseudomonas aeruginosa2
INCOME2
Outreach - Breast Cancer RStudio-Shiny application2
Outreach - Senescence RStudio-Shiny application2
Perennial ryegrass2
Xenophiles Systems Biology2
Supplemental Data for "Why did the eyewall replacement cycle in Trami terminate rapidly? "2
SASKit: Senescence-Associated Systems diagnostics Kit for cancer and stroke2
The Effect of Nape Acupuncture Combined with Rehabilitation Training on Dysphagia After Stroke: A Meta-analysis2
Comparative Proteome Profile of Placental Sub-anatomical regions2
FAIR Functional Enrichment2
MS identification of L infantum proteins related to their drug resistance patterns for new drug targets identification and ecotoxicological evaluations of their environmental and interspecies impact2
PhotoBoost2
Sampling vicinity of industrial settings for pathogens and GMO identification2
Differential abundance analysis of polyA segments in 3' sc/snRNAseq data2
CureQ demo2
Manchester Institute for Biotechnology1
ICYSB 2015 - International Practical Course in Systems Biology1
Early Metabolic Injury (LiSyM-EMI - Pillar I)1
Chronic Liver Disease Progression (LiSyM-DP - Pillar II)1
Regeneration and Repair in Acute-on-Chronic Liver Failure (LiSyM-ACLF - Pillar III)1
LiSyM Core Infrastructure and Management (LiSyM-PD)1
Liver Function Diagnostics (LiSyM-LiFuDi - Pillar IV)1
Model Guided Pharmacotherapy In Chronic Liver Disease (LiSyM-MGP)1
The Hedgehog Signalling Pathway (LiSyM-JGMMS)1
Molecular Steatosis - Imaging & Modeling (LiSyM-MSIM)1
HUMET Startup1
SEEK tutorial for DigiSal1
Training Hunfeld1
COMBINE Multicellular Modelling1
POP - the Parameter Optimisation Problem1
Regulation of flowering time in natural conditions1
Thesis1
NAD phylogeny1
Outreach - Simulation of breast cancer development using an agent based modelling approach1
Outreach - Simulation of cellular senescence using an agent based modelling approach1
Simulation Foundries1
FAIRDOM Community Workers1
COVID-19 Disease Map1
Test Project (dummy)1
Covid-19 Interferon pathway modelling and analysis1
An overview of systematic reviews of treatment of polycystic ovary syndrome with Chinese medicine1
Non equilibrium thermodynamics1
Coastal Data1
BioCreative VII1
The BeeProject1
Adaptation of Salmonella enterica1
Catabolic network of the gut bacteria P. vulgatus1
Bioreactor/Omics Phocaeicola vulgatus1
UNDESIRABLE EFFECTS OF POST COVID-19 VACCINATION: A DESCRIPTIVE STUDY, WINTER 20221
ODDITY1
Group Data Science1
Winter Wheat (Triticum aestivum L.) Grain Yield, Quality, and Net Photosynthesis When Grown Under Semi-Transparent Cadmium Telluride Photovoltaic Modules Near Maturity1
RNA-seq data1
GWI-HDMT stemcells1
Molecular QTL mapping in the ERA/ALLIANCE cohort1
Pseudomonas aeruginosa and its vesicles1
Impacts of a Vertical Bifacial Agrivoltaics System on Field Corn in Northern Colorado, USA1
Giulia Malpezzi PhD raw data1
Phage infection in Nitrosomonas europaea1
NExtSEEK Independent Projects1
More...
Programme
Centre for Engineering Biology (prev. SynthSys)1785
NIBSys1652
SysMO979
NExtSEEK448
Independent Projects345
The Digital Salmon92
Drug development for neglected parasitic diseases76
dCod 1.0: decoding systems toxicology of cod57
ERASysAPP49
Gygli Group48
SARCHI: Mechanistic modelling of health and epidemiology47
de.NBI Systems Biology Service Center (de.NBI-SysBio)43
Hallmarks of cancer 33
Research Center Borstel33
LiSyM - Systems Medicine of the Liver30
e:Bio26
iPlacenta: A European Union Horizon 2020 innovative training network (ITN)26
Model repository for M4 (Make Me My Model) clients of ISBE22
Independent Project18
FAIRDOM16
Era CoBioTech15
Experimental Transplantation Surgery15
Hellenic Foundation for Research and Innovation - Supporting academic Staff and Researchers10
COST ACTION CA21111 - OneHealthdrugs (One Health drugs against parasitic vector borne diseases in Europe and beyond) 10
Journals9
nfdi4health - German National Research Data Infrastructure for Personal Health Data9
Thermodynamics and kinetics for Biology9
DFG founded projects8
EU Projects7
NL-Bioimaging: FAIR-DM 7
BioZEment5
e:med4
Druglogics4
Clostridium beijerinckii4
Newcastle University Systems Modelling of Ageing3
Breast Cancer Simulation3
Cancer drug discovery preclinical research3
Combined therapy involving Scalp Acupuncture and Treadmill Training Inhibits Neuronal Apoptosis in Cerebral Ischemia Rats by regulating cIAP13
Electroacupuncture preconditioning reduces oxidative stress in the acute phase of cerebral ischemia-reperfusion in rats by regulating iron metabolism pathways3
Mathematical modelling of the morphological transition of Pseudomonas aeruginosa2
ILVO test2
ISBE.NL service programme2
Supplemental Data for "Why did the eyewall replacement cycle in Trami terminate rapidly? "2
The Effect of Nape Acupuncture Combined with Rehabilitation Training on Dysphagia After Stroke2
BaPro2
Systems Biology of Aging2
HUMET1
COMBINE (Computational Modeling in Biology Network)1
Thesis AHG 20191
Disease Maps1
Covid-19 disease map - Bioinformatics analysis and computational modelling1
An overview of systematic reviews of treatment of polycystic ovary syndrome with Chinese medicine1
Targeted VFA production from (waste) waters - CRETUS1
Colorado State University1
More...
Creator
Marko Petek1261
Charles Demurjian399
Falko Krause327
Andrej Blejec248
Dani Valverde219
BioData SynthSys130
Farnoush Kiyanpour120
Maja Zagorscak92
Jost Ludwig83
Jacky Snoep77
Ina Poehner62
Rebecca Wade60
Lina Patricia Barreto Parra58
Gudrun Gygli57
Andrew Millar53
Felix Ott44
Malte Herold43
Yang Jin38
Fabian Grammes37
Jon Olav Vik34
Yi Chen33
Dawie van Niekerk31
Matthias König30
Karl-Heinz Herrmann30
Hans V. Westerhoff29
Theresa Kouril29
Dikshant Pradhan29
Yin Hoon Chew28
Wan-Ting Zhao28
Daniel Seaton27
Per Bruheim26
Zdenka Bartosova26
Joanna Panecka-Hofman25
Janette Alford25
Jan-Willem Veening24
Maksim Zakhartsev22
Alexey Kolodkin22
Inken Wohlers20
Sebastian Curth19
Thomas Harvey19
Karina Dale18
Christoff Odendaal18
Lorenzo Tagliazucchi18
Lars Wöhlbrand18
Olga Krebs17
Katy Wolstencroft16
Raju Prasad Sharma16
Uriel Urquiza-Garcia16
Sahar Hassani16
Praveen kumar Sappa15
Matthew Rolfe14
Pasquale Linciano14
Niels Zondervan13
Lu Shen13
Maria Paola Costi13
Natalia Gebara13
Ayat Ismail13
Martijn Bekker12
Graceline Tina Kirubakaran12
Xiaokang Zhang12
Silvia Petrezselyova11
Margrete Solheim11
Jacqueline Wolf11
Markus Wolfien11
Mohamed Albadry11
Uta Dahmen11
Juan Iglesias-Riobó11
Anne-Marie Galow10
Xinmeng Xu10
Karthika Balusamy10
Paul Heusden9
Helge Stark9
Juergen Pleiss9
Runyu Liang9
Joerg Stuelke8
Phil Wright7
Holger Janssen7
Wolfgang Müller7
Trong Khoa Pham7
Anette McLeod7
Andrea Rizzo7
Rohola Hosseini7
Tomas Fiedler6
Sonja Steinsiek6
Sandra Maass6
Dong-Hyun Kim6
Ulrike Wittig6
Gareth Gillard6
Virginie Mengin6
Hannah O'Keefe6
Julia Scheel6
Katja Bettenbrock5
Ulf Liebal5
Anna Feldman-Salit5
Jurgen Haanstra5
Thomas Rimpf5
Natalie Stanford5
Antoine Buetti-Dinh5
Inga Leena Angell5
Fatemeh Zamanzad Ghavidel5
Christian Bauer5
Ziva Ramsak5
Jennifer Zehner5
Pål A. Olsvik5
Dorothee Houry5
Theresa Bender5
Eleni Konia5
Ioannis Metaxas5
Gabriela Loscalzo5
Derly Andrade5
Dietmar Schomburg4
Jaromir Zahrádka4
Hanna Meyer4
Abeer Fadda4
Barbara Bakker4
Alejandro Leroux4
Franco du Preez4
Michael Kohlstedt4
Daniel Hönicke4
Koen van Grinsven4
Stefan Albaum4
Magny Sidsel Thomassen4
Mohamed El Hajjami4
Marta Eide4
Karel Sedlar4
Meina Neumann-Schaal4
Jake Schissel4
Lennart Bartels4
Leruo Keokilwe4
Iurii (Yuriy) Sheludko4
David Hodgson3
Jay Moore3
Guido Hasenbrink3
Alexander Ter Beek3
Inge Jonassen3
Fekadu Yadetie3
Anders Goksøyr3
Evert Bosdriesz3
Odd André Karlsen3
Saptarshi Bej3
Sofia Doello3
Kate Jounghyun Um3
Sarah Kirstein3
Andi N.K.B.P Iskandar3
Kenric Lee3
Rainer Malik3
Michael Hecker2
Uwe Voelker2
Trond Ellingsen2
Stuart Owen2
Sara Jabbari2
Øyvind Jakobsen2
Per Bruheim2
Håvard Sletta2
Anders Øverby2
Sunniva Hoel2
Sven Even Borgos2
Michael Ederer2
Stefan Stagge2
Rick Lewis2
Alexander Wentzel2
Stefan Henrich2
Federico Rojas2
Silvio Hering2
Araz Zeyniyev2
Maja Rey2
Quyen Nguyen2
Ulrike Mäder2
Eivind Almaas2
Ansgar Poetsch2
Soeren Bellenberg2
Arne Gjuvsland2
Martin Golebiewski2
Sandve Simen2
Jacob Seilø Torgersen2
Cornelius Erbelding2
Luis Serrano2
Maria Lluch2
Eva Yus2
Alexander Graf2
Katja Baerenfaller2
Chloe Spalding2
Ines Heiland2
Terry G.J. Derks2
Harald Kusch2
Matthias Löbe2
Ligia Akemi Kiyuna2
Carsten Oliver Schmidt2
Moritz Lehne2
Aliaksandra Shutsko2
Sebastian Höpfl2
Xiangcheng Li2
Faiz Khan2
Joost Aerts2
Mojca Juteršek2
Theodora Calogeropoulou2
Urte Clausen2
Sören-Tobias Vital2
Ana Lobo2
Guy Caljon2
Jane Davey2
David Calderón-Franco2
Yashna Paul2
Elke Hammer2
Rene Bults2
Oscar Kuipers1
Bas Teusink1
Maria Jonsson1
Vitor Martins dos Santos1
David Rand1
David Wild1
Elizabeth Wellington1
Eriko Takano1
Gregory Challis1
Juan-Francisco Martin1
Kay Nieselt1
Lubbert Dijkhuizen1
Maggie Smith1
Nigel Burroughs1
Preben Krabben1
Rainer Breitling1
Wolfgang Wohlleben1
Bettina Siebers1
Walid Omara1
Carole Goble1
M. Tauqeer Alam1
William Gaze1
Brent Kiernan1
Roxane Legaie1
Anthony Palathingal1
R Jansen1
Jens Reuther1
Antonio Rodríguez-García1
Louise Thomas1
Leif Steil1
Sebastian Henkel1
Ibrahim Mehmeti1
Susanne Gerber1
Clara Navarrete1
Jan Maarten van Dijl1
Morris Swertz1
Maria Elena Merlo1
Colin Harwood1
Maike Bartholomae1
joseph newman1
Priyanka Nannapaneni1
Wouter Kuit1
Fiona Achcar1
Antje Sieg1
Ruben Mars1
Eduard Kerkhoven1
John Raedts1
Wayne Aubrey1
Klaas Hellingwerf1
Ron Henkel1
Katharina Kruse1
Rostyslav Kuzyakiv1
Dagmar Waltemath1
Irina Medvedeva1
Lars Snipen1
Dominic Nanton1
Vasundra Toure1
Andreas Albersmeier1
Roel Van Driel1
Jan Boren1
Adil Mardinoglu1
Jasper Koehorst1
Huseyin Tas1
Jan Hasenauer1
Vânia Pobre1
Peter Schaap1
Kathrin Thedieck1
Tobias Anzeneder1
Mathias Ziegler1
Baudoin Delépine1
Janina Leyk1
Carsten Kettner1
Eileen Marie Hanna1
Angeles Hueso-Gil1
Carsten Haupka1
Cláudia Vicente1
DAVID RODRIGUEZ ESPESO1
Hannah Kinmonth-Schultz1
Petra Engele1
Ghadeer Mobasher1
PoLiMeR_user Martines_data1
Alejandra Gilabert1
Ahmed Hemedan1
Hong Yang1
Birger Wolter1
Leonard Schmiester1
Emmalie Jager1
Johann Rohwer1
Johannes Darms1
Lukrécia Mertová1
Chris Wilson1
Sophie Klopfenstein1
Yanhua Liu1
Julia Koblitz1
Cecilia Pozzi1
Amatus Beyer1
Aaron Laier1
Shareefa AlGhamdi1
Oleg Lewkowski1
Alejandro Martínez Rey1
Daniel Meißner1
Severin Polreich1
Tobias Reinberger1
Marius Steen Dobloug1
Daniele Aiello1
Maithili Kalamkar1
Anja Wiechert1
Giulia Malpezzi1
More...
Collection
B cell related items5
Distal Convoluted Tubule Cells Related Items5
Descending Vasa Recta Cells Related Items5
Endothelial Cell Related Items5
Fibroblast Cell Related Items5
Glomerular Capillary Cells Related Items5
Interstitial Cell A Cells Related Items5
Interstitial Cell B Cells Related Items5
Macula Densa Cells Related Items5
M2 Machrophage Cells Related Items5
Monocyte Derived Cells Related Items5
Natural Killer Cell Related Items5
Non-Classical Monocyte Related Items5
Parietal Cells Related Items5
Plasma Cells Related Items5
Podocyte Cells Related Items5
Principal Cells Related Items5
Thick Ascending Limb Cells Related Items5
T Cells Related Items5
Proximal Tubule Cells Related Items5
Vascular Smooth Muscle Cells Related Items5
Mesangial Cells Related Items5
Connecting Tubule Cells Related Items4
Pericyte Cells Related Items4
More...
Data type annotations
Data25
MRI image24
Sequence features metadata10
Mass spectrometry data6
Image5
Sample annotation2
Enzyme kinetics data1
Image metadata1
Molecular mass1
Molecular property (general)1
Organism report1
PRIDE experiment accession number1
Protein name (UniProt)1
RNA sequence1
Sample ID1
Sequence1
Sequence feature qualifier1
More...
Data format annotations
ZIP format32
PDB26
xlsx17
CSV11
DICOM format9
Mascot .dat file6
FASTA4
Format3
Format (by type of data)3
plain text format (unformatted)3
TSV3
JSON2
PNG2
FASTQ-illumina1
ISA-TAB1
NetCDF1
R script1
VCF1
Workflow format1
More...
Assay type
Experimental Assay Type3721
Model Analysis Type683
Gene Regulatory Network132
Transcriptomics56
Metabolic Network33
Metabolite Profiling29
Proteomics29
http://www.mygrid.org.uk/ontology/JERMOntology#metabolomics28
Protein Expression Profiling18
Metabolomics17
Organism or Strain Characteristics15
Protein Quantification15
Gene Expression Profiling13
Enzymology12
Cultivation Experiment11
MicroRNA Profiling11
Enzymatic Assay9
Metabolism9
Protein Identification9
Metabolite Concentration8
Gene Expression7
Transcriptional Profiling7
Genomics6
RNA-seq Profiling5
Genome Scale4
Discontinuous Enzymatic3
Extracellular Metabolite Concentration3
Glucose Pulse3
DNA Sequencing2
Interactomics2
Intracellular Metabolite Concentration2
Metagenomics2
Cell Count1
Cell Cycle1
Signal Induction1
More...
Technology type
Technology Type3677
Next generation sequencing45
NMR37
Mass Spectrometry34
Imaging32
http://www.mygrid.org.uk/ontology/JERMOntology#metabolomics28
Liquid Chromatography-tandom Mass Spectrometry27
Liquid Chromatography Mass Spectrometry23
Microarray19
Rna-seq17
Gas Chromatography Mass Spectrometry16
Enzymatic Activity Measurements14
Custom Array11
Tandem Mass Spectrometry8
HPLC7
Initial Rate Experiment7
Orbitrap Velos7
Progressive Curve Experiment7
qPCR7
qRT-PCR7
Microscopy5
Isotope Ratio Mass Spectrometry3
ChIP-on-chip2
Chromatography2
Electrophoresis2
2D Gel Electrophoresis1
Chemostat Measurement1
Gas Chromatography1
Gel Electrophoresis1
Ion Mobility Spectrometry Mass Spectrometry1
Molecule Labelling1
UPLC1
Western Blot1
More...
6014
Data files visible to you, out of a total of 8248
The file contains FeaturePlots of 4 different cardiomyocyte markers (Actn2, Tnnc1, Actc1 and Ryr2) to demonstrate how annotation of clusters needs to be based on several markers and approaches, which in the aggregate allow for more reliable conclusions/results.
Creator: Anne-Marie Galow
Submitter: Anne-Marie Galow
Download
The file contains the absolute and relative cell/nuclei numbers per cluster for each individual dataset used in the integrated analysis. Subpopulations were grouped together for the representation of relative cell/nuclei numbers.
Creator: Anne-Marie Galow
Submitter: Anne-Marie Galow
Data for global pH monitoring experiments for precipitation in publication: Microbial-induced calcium carbonate precipitation: An experimental toolbox for in situ and real-time investigation of micro-scale pH evolution. Included data: calibration data and data for pH evolution of precipitation process (including spectrum before measurement, timeevolution of absorption intensity and spectrum after measurement).
Creator: Jennifer Zehner
Submitter: Jennifer Zehner
Optical microscopy data for precipitation process
Creator: Jennifer Zehner
Submitter: Jennifer Zehner
Data for local pH monitoring experiments for dissolution in publication: Microbial-induced calcium carbonate precipitation: An experimental toolbox for in situ and real-time investigation of micro-scale pH evolution
Creator: Jennifer Zehner
Submitter: Jennifer Zehner
Data for Raman microspectroscopy in publication: Microbial-induced calcium carbonate precipitation: An experimental toolbox for in situ and real-time investigation of micro-scale pH evolution
Creator: Jennifer Zehner
Submitter: Jennifer Zehner
Data for local pH monitoring precipitation experiments in publication: Microbial-induced calcium carbonate precipitation: An experimental toolbox for in situ and real-time investigation of micro-scale pH evolution
Creator: Jennifer Zehner
Submitter: Jennifer Zehner
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged
Creator: Andrej Blejec
Submitters: Andrej Blejec, Maja Zagorscak
