ExploreList of samples used in the assay (extracted from original BioDare metadata and converted to csv)
SEEK ID: https://fairdomhub.org/data_files/9682?version=1
Filename:
Sample_list.csv
Format: Comma-separated values document
Size: 612 Bytes
sample_id,sample_type,origin,growth_stage,age,marker,growth_cond_name,experiment_cond_name,ignored,genetic_info.species,genetic_info.background,genetic_info.genotype,genetic_info.line 1,seedling,seedling,seedling,0,CCA1,soil,soil LL,false,Arabidopsis thaliana,Landsberg (Ler),Wild Type,unknown 2,seedling,seedling,seedling,0,CCA1,soil,soil LL,false,Arabidopsis thaliana,Landsberg (Ler),gi-3,unknown 3,seedling,seedling,seedling,0,LHY,soil,soil LL,false,Arabidopsis thaliana,Landsberg (Ler),Wild Type,unknown 4,seedling,seedling,seedling,0,LHY,soil,soil LL,false,Arabidopsis thaliana,Landsberg (Ler),gi-3,unknown
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Created: 19th Jun 2026 at 14:19
Last updated: 19th Jun 2026 at 14:20
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Version History
Version 1 (earliest) Created 19th Jun 2026 at 14:20 by Daniel Thedie
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https://orcid.org/0000-0002-1352-7245Research Software Engineer in the Biological Research Data Management team (BioRDM) at the University of Edinburgh.
The Centre for Engineering Biology is the University of Edinburgh's research organisation in interdisciplinary, Synthetic and Systems Biology, founded in 2023 as the successor to SynthSys, itself founded in 2012 as the successor to the Centre for Systems Biology at Edinburgh (CSBE). CSBE was newly founded in 2007. The Centre for Engineering Biology is a hub organisation that links across multiple, major funding awards, including an Engineering Biology Mission Hub, and EPSRC C-loop.
Projects: Millar group, PHYTOCAL: Phytochrome Control of Resource Allocation and Growth in Arabidopsis and in Brassicaceae crops, TiMet, POP - the Parameter Optimisation Problem, Regulation of flowering time in natural conditions, PlaSMo model repository, BioDare1
Web page: https://biology.ed.ac.uk/centre-engineering-biology
Experiment data previously hosted on the original version of BioDare (biodare.ed.ac.uk).
Programme: Centre for Engineering Biology (prev. SynthSys)
Public web page: Not specified
Collection of experiments created by Tsuyoshi Mizoguchi on the original BioDare and automatically transferred to FAIRDOM Hub.
Unpublished
DOI: none
Mizoguchi2002_wt_gi_LL_LHY_CCA1
| Property | Value |
|---|---|
| BioDare ID | 13228428214032 |
| Author | Mizoguchi Tsuyoshi |
| Institution | John Innes Centre |
| License | CC_BY |
Description
Literature data from: 'LHY and CCA1 are partially redundant genes required to maintain circadian rhythms in Arabidopsis' by: Mizoguchi Tsuyoshi.
comparison of wt and gi-3 (Ler) in LL
Purpose
LL time courses for LHY, CCA1 mRNA for wt, gi; soil
Comments
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Tsuyoshi Mizoguchi
Study: Unpublished
