output/quast/Lactococcus/transposed_report.txt

Version 1

All statistics are based on contigs of size >= 200 bp, unless otherwise noted (e.g., "# contigs (>= 0 bp)" and "Total length (>= 0 bp)" include all contigs).

Assembly  # contigs (>= 0 bp)  # contigs (>= 1000 bp)  # contigs (>= 5000 bp)  # contigs (>= 10000 bp)  # contigs (>= 25000 bp)  # contigs (>= 50000 bp)  Total length (>= 0 bp)  Total length (>= 1000 bp)  Total length (>= 5000 bp)  Total length (>= 10000 bp)  Total length (>= 25000 bp)  Total length (>= 50000 bp)  # contigs  Largest contig  Total length  GC (%)  N50    N75    L50  L75  # total reads  # left    # right   Mapped (%)  Properly paired (%)  Avg. coverage depth  Coverage >= 1x (%)  # N's per 100 kbp  Complete BUSCO (%)  Partial BUSCO (%)  # predicted genes (unique)  # predicted genes (>= 0 bp)  # predicted genes (>= 300 bp)  # predicted genes (>= 1500 bp)  # predicted genes (>= 3000 bp)  # predicted rRNA genes
spades    245                  139                     60                      38                       27                       13                       2541749                 2482734                    2317176                    2162610                     1981093                     1476297                     242        256070          2541371       34.97   69806  27770  10   25   182073123      91023201  91023201  99.69       98.29                10684                100.0               0.00               97.30               0.00               952                         949 + 3 part                 900 + 3 part                   346 + 0 part                    88 + 0 part                     7 + 0 part