output/quast/Enterococcus/transposed_report.txt

Version 1

All statistics are based on contigs of size >= 200 bp, unless otherwise noted (e.g., "# contigs (>= 0 bp)" and "Total length (>= 0 bp)" include all contigs).

Assembly  # contigs (>= 0 bp)  # contigs (>= 1000 bp)  # contigs (>= 5000 bp)  # contigs (>= 10000 bp)  # contigs (>= 25000 bp)  # contigs (>= 50000 bp)  Total length (>= 0 bp)  Total length (>= 1000 bp)  Total length (>= 5000 bp)  Total length (>= 10000 bp)  Total length (>= 25000 bp)  Total length (>= 50000 bp)  # contigs  Largest contig  Total length  GC (%)  N50    N75    L50  L75  # total reads  # left    # right   Mapped (%)  Properly paired (%)  Avg. coverage depth  Coverage >= 1x (%)  # N's per 100 kbp  Complete BUSCO (%)  Partial BUSCO (%)  # predicted genes (unique)  # predicted genes (>= 0 bp)  # predicted genes (>= 300 bp)  # predicted genes (>= 1500 bp)  # predicted genes (>= 3000 bp)  # predicted rRNA genes
spades    321                  180                     106                     84                       36                       13                       3329954                 3253815                    3099388                    2941721                     2148681                     1309856                     319        167507          3329701       42.93   41366  18092  21   53   42014317       21002102  21002102  99.75       99.25                1883                 100.0               0.00               93.24               0.68               2255                        2240 + 15 part               2172 + 14 part                 467 + 1 part                    54 + 1 part                     4 + 1 part