output/quast/Enterococcus/report.tsv
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_p_RNAinVAL/_I_03_Omics/_S_02_metagenome_resp/_A_06_extr_bact-assembly/

SEEK ID: https://fairdomhub.org/data_files/4780?version=1

Filename: output/quast/Enterococcus/report.tsv

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Assembly	spades
# contigs (>= 0 bp)	321
# contigs (>= 1000 bp)	180
# contigs (>= 5000 bp)	106
# contigs (>= 10000 bp)	84
# contigs (>= 25000 bp)	36
# contigs (>= 50000 bp)	13
Total length (>= 0 bp)	3329954
Total length (>= 1000 bp)	3253815
Total length (>= 5000 bp)	3099388
Total length (>= 10000 bp)	2941721
Total length (>= 25000 bp)	2148681
Total length (>= 50000 bp)	1309856
# contigs	319
Largest contig	167507
Total length	3329701
GC (%)	42.93
N50	41366
N75	18092
L50	21
L75	53
# total reads	42014317
# left	21002102
# right	21002102
Mapped (%)	99.75
Properly paired (%)	99.25
Avg. coverage depth	1883
Coverage >= 1x (%)	100.0
# N's per 100 kbp	0.00
Complete BUSCO (%)	93.24
Partial BUSCO (%)	0.68
# predicted genes (unique)	2255
# predicted genes (>= 0 bp)	2240 + 15 part
# predicted genes (>= 300 bp)	2172 + 14 part
# predicted genes (>= 1500 bp)	467 + 1 part
# predicted genes (>= 3000 bp)	54 + 1 part
# predicted rRNA genes	4 + 1 part

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