Data files

338 Data files visible to you, out of a total of 354

_p_stRT

Supplementary Table S5 - Rywal biological evidence filtering results. Output of 1st filtering step by biological evidence for cv. Rywal. Layer _p_stRT/_I_STRT/_S_03_stCuSTr/_A_03.1_filtering/reports/

Creator: Maja Zagorscak

Submitter: Maja Zagorscak

DOI: 10.15490/fairdomhub.1.datafile.3405.1

Investigations: _I_STRT

Studies: SupplementaryInformation, _S_03_stCuSTr

Assays: Supplementary Information, _A_03.1_filtering

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Created: 18th Mar 2020 at 18:09, Last updated: 7th Apr 2020 at 13:48

/reports/SupplementaryTableS4

_p_stRT

Supplementary Table S4 - PW363 biological evidence filtering results. Output of 1st filtering step by biological evidence for breeding clone PW363. Layer _p_stRT/ _I_STRT/_S_03_stCuSTr/_A_03.1_filtering/reports/,

Creator: Maja Zagorscak

Submitter: Maja Zagorscak

DOI: 10.15490/fairdomhub.1.datafile.3406.1

Investigations: _I_STRT

Studies: SupplementaryInformation, _S_03_stCuSTr

Assays: Supplementary Information, _A_03.1_filtering

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Created: 18th Mar 2020 at 18:20, Last updated: 7th Apr 2020 at 13:47

/reports/SupplementaryTableS3

_p_stRT

Supplementary Table S3 - Désirée biological evidence filtering results. Output of 1st filtering step by biological evidence for cv. Désirée. Layer _p_stRT/_I_STRT/_S_03_stCuSTr/_A_03.1_filtering/reports/

Creator: Maja Zagorscak

Submitter: Maja Zagorscak

DOI: 10.15490/fairdomhub.1.datafile.3407.1

Investigations: _I_STRT

Studies: SupplementaryInformation, _S_03_stCuSTr

Assays: Supplementary Information, _A_03.1_filtering

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Created: 18th Mar 2020 at 18:37, Last updated: 7th Apr 2020 at 13:45

/reports/SupplementaryFigure2.pdf

_p_stRT

Number of transcripts from de novo assemblies contributing to breeding clone PW363, transcriptome and number of complete BUSCOs found in assemblies. Proportion of all contigs in de novo assembly (blue bars) and proportion of EvidentialGene okay set (green bars), and the number of complete BUSCOs (dots) using https://busco.ezlab.org/datasets/embryophyta_odb9.tar.gz set are shown. Assembly software abbreviations: CLCdn - CLC Genomics Workbench, Vdn - Velvet, Sdn - SPAdes.

Creator: Maja Zagorscak

Submitter: Maja Zagorscak

DOI: 10.15490/fairdomhub.1.datafile.3108.1

Investigations: _I_STRT

Studies: SupplementaryInformation, _S_03_stCuSTr

Assays: Supplementary Information, _A_02.2_assembly-contribution-count

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Created: 15th Nov 2019 at 18:05, Last updated: 6th Apr 2020 at 17:37

/reports/SupplementaryFigure3.pdf

_p_stRT

Number of transcripts from de novo assemblies contributing to cultivar Rywal, transcriptome and number of complete BUSCOs found in assemblies. Proportion of all contigs in de novo assembly (blue bars) and proportion of EvidentialGene okay set (green bars), and the number of complete BUSCOs (dots) using https://busco.ezlab.org/datasets/embryophyta_odb9.tar.gz set are shown. Assembly software abbreviations: CLCdn - CLC Genomics Workbench, Vdn - Velvet, Sdn - SPAdes, PBdn - PacBio.

Creator: Maja Zagorscak

Submitter: Maja Zagorscak

DOI: 10.15490/fairdomhub.1.datafile.3109.1

Investigations: _I_STRT

Studies: SupplementaryInformation, _S_03_stCuSTr

Assays: Supplementary Information, _A_02.2_assembly-contribution-count

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Created: 15th Nov 2019 at 18:08, Last updated: 6th Apr 2020 at 17:35

/reports/cv_group-Rplot.pdf

_p_stRT