Data files
What is a Data file?Filters
Maxquant output.
Proteomics data comparing LXX cultures cultivated on mineral and in continuous culture: mineral samples: LNU-LXX9-Si00-14B-P-B-Pr LNU-LXX9-Si00-14B-P-C-Pr LNU-LXX9-Si00-14B-P-D-Pr conitnuous culture samples: LNU-LXX9-Si00-CnA-P-B2-Pr LNU-LXX9-Si00-CnA-P-B3-Pr LNU-LXX9-Si00-CnA-P-B4-Pr LNU-LXX9-Si00-CnA-P-B5-Pr LNU-LXX9-Si00-CnA-P-B6-Pr LNU-LXX9-Si00-CnA-P-B7-Pr
Creator: Mohamed El Hajjami
Submitter: Mohamed El Hajjami
Creator: Malte Herold
Submitter: Malte Herold
Creator: Malte Herold
Submitter: Malte Herold
Creator: Malte Herold
Submitter: Malte Herold
Creator: Malte Herold
Submitter: Malte Herold
LFQ intensities from maxquant from combined search (mineral and continuous samples), filtered (at least 3 values in each condition), log-transformed
Creators: Malte Herold, Ansgar Poetsch, Mohamed El Hajjami, Ansgar
Submitter: Malte Herold
LFQ intensities from maxquant from combined search (mineral and continuous samples), log-transformed
Creators: Malte Herold, Ansgar Poetsch, Mohamed El Hajjami
Submitter: Malte Herold
Raw data and assembly for pacbio sequencing of L.ferriphilum.
Creator: Malte Herold
Submitter: Malte Herold
Link to the repository for functional annotation
Creator: Malte Herold
Submitter: Malte Herold
Genbank file for the L.ferriphilum chromosome, annotated with prokka 1.12beta
Creator: Malte Herold
Submitter: Malte Herold
Table combining data for L.ferriphilum. RNAseq data, Proteomics LFQs, Functional annotation
Comparison between axenic and planktonic readcounts with deseq2
Creator: Malte Herold
Submitter: Malte Herold
Comparison for LFQs with t-test in Perseus
Creator: Malte Herold
Submitter: Malte Herold
Raw read files for samples
Creator: Malte Herold
Submitter: Malte Herold
Normalized counts (tpm) for LF samples with mineral
Creator: Malte Herold
Submitter: Malte Herold
Normalized counts (tpm) for L.ferriphilum samples from continuous culture.
Creator: Malte Herold
Submitter: Malte Herold
Repository for omics data analysis
Creator: Malte Herold
Submitter: Malte Herold
Creators: Eivind Almaas, Marius Eidsaa
Submitter: Eivind Almaas
Creators: Eivind Almaas, Marius Eidsaa
Submitter: Eivind Almaas