BioModelKit is a database for modular modeling, where modules describe the functionality of single biomolecular entities and their interactions with other molecules in terms of Petri nets. All modules adhere to the guidelines of the modular Petri net modeling concept, which has been developed in need of a sophisticated reconstruction of growing biomolecular models. The database allows to browse to single modules and to intuitively gather the functionality of a biomolecular entity by its corresponding Petri net. In addition, the applied modular Petri net modeling concept allows to automatically couple a repository of modules of desired interacting biomolecular entities. Those resulting comprehensive models can be used for further profound analysis. Based on this approach its is also possible to generate single or double mutated models.
Web page: http://www.biomodelkit.deFunding details: