Data files
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Genbank file for the L.ferriphilum chromosome, annotated with prokka 1.12beta
Creator: Malte Herold
Submitter: Malte Herold
Table combining data for L.ferriphilum. RNAseq data, Proteomics LFQs, Functional annotation
Comparison between axenic and planktonic readcounts with deseq2
Creator: Malte Herold
Submitter: Malte Herold
Comparison for LFQs with t-test in Perseus
Creator: Malte Herold
Submitter: Malte Herold
Raw read files for samples
Creator: Malte Herold
Submitter: Malte Herold
Normalized counts (tpm) for LF samples with mineral
Creator: Malte Herold
Submitter: Malte Herold
Normalized counts (tpm) for L.ferriphilum samples from continuous culture.
Creator: Malte Herold
Submitter: Malte Herold
Repository for omics data analysis
Creator: Malte Herold
Submitter: Malte Herold
Creator: Martin Golebiewski
Submitter: Martin Golebiewski
Creators: Eivind Almaas, Marius Eidsaa
Submitter: Eivind Almaas
Creators: Eivind Almaas, Marius Eidsaa
Submitter: Eivind Almaas
Creators: Theresa Kouril, Jacky Snoep
Submitter: Theresa Kouril
Creator: Theresa Kouril
Submitter: Theresa Kouril
incubations with yeast enzymes at 30C
Creators: Theresa Kouril, Jacky Snoep
Submitter: Theresa Kouril
Creators: Theresa Kouril, Jacky Snoep
Submitter: Theresa Kouril
Creators: Theresa Kouril, Jacky Snoep
Submitter: Theresa Kouril
metabolite quantification via enzymatic analysis
Creators: Theresa Kouril, Jacky Snoep
Submitter: Theresa Kouril
Creators: Theresa Kouril, Jacky Snoep
Submitter: Theresa Kouril
PGK yeast without recycling of ATP
Creators: Jacky Snoep, Theresa Kouril
Submitter: Jacky Snoep
PGK yeast with recycling of ATP
Creator: Jacky Snoep
Submitter: Jacky Snoep
Creator: Fatemeh Zamanzad Ghavidel
Submitter: Fatemeh Zamanzad Ghavidel
Creator: Fatemeh Zamanzad Ghavidel
Submitter: Fatemeh Zamanzad Ghavidel
Creator: Fatemeh Zamanzad Ghavidel
Submitter: Fatemeh Zamanzad Ghavidel
Creator: Fatemeh Zamanzad Ghavidel
Submitter: Fatemeh Zamanzad Ghavidel
Creator: Fatemeh Zamanzad Ghavidel
Submitter: Fatemeh Zamanzad Ghavidel
Creator: Theresa Kouril
Submitter: Theresa Kouril
Supplementary file required by main Zip archive file for file extraction.
Creators: Helge Stark, Trong Khoa Pham, Phil Wright
Submitter: Helge Stark
Cells of S. solfataricus were grown on either caseinhydrolysate or D-glucose (reference) as sole carbon source.
Creator: Helge Stark
Submitter: Helge Stark
The distribution of enzymes involved in oxidative Stickland reactions among archaea was estimated using BLAST searches (BLOSUM62) with the protein sequences of acetate-CoA ligase (EC 6.2.1.13, ACS), ketoisovalerate oxidoreductase (EC 1.2.7.7, BC-OR) and indolepyruvate oxdoreductase (EC 1.2.7.8, AR-OR) from Pyrococcus furiosus (Pfu) and Sulfolobus solfataricus (Sso) against all archaea. Positive results are indicated by a '+' (homologue found, e-value < 1e-20) and negative results by a '-' (no ...
Creator: Helge Stark
Submitter: Helge Stark
The calculation of amino acid uptake rates for cells of Sulfolobus solfataricus P2 grown on caseinhydrolysate was performed based on the relative consumption of individual amino acids from the growth medium and the previously published absolute concentration of amino acids in the used growth medium.
Creator: Helge Stark
Submitter: Helge Stark
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