Sample_list
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List of samples used in the assay (extracted from original BioDare metadata and converted to csv)

SEEK ID: https://fairdomhub.org/data_files/9113?version=1

Filename: Sample_list.csv

Format: Comma-separated values document

Size: 5.96 KB

sample_id,sample_type,origin,growth_stage,age,marker,growth_cond_name,experiment_cond_name,ignored,genetic_info.species,genetic_info.background,genetic_info.genotype,genetic_info.line,genetic_info.provenance,param.@name,param.@value
1,Spores,unquantified,seedling,7,Pcbox,LL2,Free Running 2,false,Neurospora crassa,Columbia (Col),Wild Type,2,Robust stock,TAG,Luc
2,Spores,unquantified,seedling,7,Pcbox,LL2,Free Running 2,false,Neurospora crassa,Columbia (Col),Wild Type,2,Robust stock,TAG,Luc
3,Spores,unquantified,seedling,7,Pcbox,LL2,Free Running 2,false,Neurospora crassa,Columbia (Col),Wild Type,2,Robust stock,TAG,Luc
4,Spores,unquantified,seedling,7,Pcbox,LL2,Free Running 2,false,Neurospora crassa,Columbia (Col),Wild Type,17,Robust stock,TAG,Luc
5,Spores,unquantified,seedling,7,Pcbox,LL2,Free Running 2,false,Neurospora crassa,Columbia (Col),Wild Type,17,Robust stock,TAG,Luc
6,Spores,unquantified,seedling,7,Pcbox,LL2,Free Running 2,true,Neurospora crassa,Columbia (Col),Wild Type,17,Robust stock,TAG,Luc
7,Spores,unquantified,seedling,7,Pcbox,LL2,Free Running 2,false,Neurospora crassa,Columbia (Col),Wild Type,4,Robust stock,TAG,Luc
8,Spores,unquantified,seedling,7,Pcbox,LL2,Free Running 2,false,Neurospora crassa,Columbia (Col),Wild Type,4,Robust stock,TAG,Luc
9,Spores,unquantified,seedling,7,Pcbox,LL2,Free Running 2,false,Neurospora crassa,Columbia (Col),Wild Type,4,Robust stock,TAG,Luc
10,Spores,unquantified,seedling,7,Pcbox,LL,Free Running,false,Neurospora crassa,Columbia (Col),Wild Type,2,Robust stock,TAG,Luc
11,Spores,unquantified,seedling,7,Pcbox,LL,Free Running,false,Neurospora crassa,Columbia (Col),Wild Type,2,Robust stock,TAG,Luc
12,Spores,unquantified,seedling,7,Pcbox,LL,Free Running,false,Neurospora crassa,Columbia (Col),Wild Type,2,Robust stock,TAG,Luc
13,Spores,unquantified,seedling,7,Pcbox,LL,Free Running,false,Neurospora crassa,Columbia (Col),Wild Type,17,Robust stock,TAG,Luc
14,Spores,unquantified,seedling,7,Pcbox,LL,Free Running,false,Neurospora crassa,Columbia (Col),Wild Type,17,Robust stock,TAG,Luc
15,Spores,unquantified,seedling,7,Pcbox,LL,Free Running,false,Neurospora crassa,Columbia (Col),Wild Type,17,Robust stock,TAG,Luc
16,Spores,unquantified,seedling,7,Pcbox,LL,Free Running,false,Neurospora crassa,Columbia (Col),Wild Type,4,Robust stock,TAG,Luc
17,Spores,unquantified,seedling,7,Pcbox,LL,Free Running,false,Neurospora crassa,Columbia (Col),Wild Type,4,Robust stock,TAG,Luc
18,Spores,unquantified,seedling,7,Pcbox,LL,Free Running,false,Neurospora crassa,Columbia (Col),Wild Type,4,Robust stock,TAG,Luc
19,Spores,unquantified,seedling,7,Pcbox,LL3,Free Running 3,false,Neurospora crassa,Columbia (Col),Wild Type,2,Robust stock,TAG,Luc
20,Spores,unquantified,seedling,7,Pcbox,LL3,Free Running 3,false,Neurospora crassa,Columbia (Col),Wild Type,2,Robust stock,TAG,Luc
21,Spores,unquantified,seedling,7,Pcbox,LL3,Free Running 3,false,Neurospora crassa,Columbia (Col),Wild Type,2,Robust stock,TAG,Luc
22,Spores,unquantified,seedling,7,Pcbox,LL3,Free Running 3,false,Neurospora crassa,Columbia (Col),Wild Type,17,Robust stock,TAG,Luc
23,Spores,unquantified,seedling,7,Pcbox,LL3,Free Running 3,false,Neurospora crassa,Columbia (Col),Wild Type,17,Robust stock,TAG,Luc
24,Spores,unquantified,seedling,7,Pcbox,LL3,Free Running 3,false,Neurospora crassa,Columbia (Col),Wild Type,17,Robust stock,TAG,Luc
25,Spores,unquantified,seedling,7,Pcbox,LL3,Free Running 3,false,Neurospora crassa,Columbia (Col),Wild Type,4,Robust stock,TAG,Luc
26,Spores,unquantified,seedling,7,Pcbox,LL3,Free Running 3,false,Neurospora crassa,Columbia (Col),Wild Type,4,Robust stock,TAG,Luc
27,Spores,unquantified,seedling,7,Pcbox,LL3,Free Running 3,false,Neurospora crassa,Columbia (Col),Wild Type,4,Robust stock,TAG,Luc
28,Spores,unquantified,seedling,7,Pcbox,LL4,Free Running 4,false,Neurospora crassa,Columbia (Col),Wild Type,2,Robust stock,TAG,Luc
29,Spores,unquantified,seedling,7,Pcbox,LL4,Free Running 4,false,Neurospora crassa,Columbia (Col),Wild Type,2,Robust stock,TAG,Luc
30,Spores,unquantified,seedling,7,Pcbox,LL4,Free Running 4,false,Neurospora crassa,Columbia (Col),Wild Type,2,Robust stock,TAG,Luc
31,Spores,unquantified,seedling,7,Pcbox,LL4,Free Running 4,false,Neurospora crassa,Columbia (Col),Wild Type,17,Robust stock,TAG,Luc
32,Spores,unquantified,seedling,7,Pcbox,LL4,Free Running 4,false,Neurospora crassa,Columbia (Col),Wild Type,17,Robust stock,TAG,Luc
33,Spores,unquantified,seedling,7,Pcbox,LL4,Free Running 4,false,Neurospora crassa,Columbia (Col),Wild Type,17,Robust stock,TAG,Luc
34,Spores,unquantified,seedling,7,Pcbox,LL4,Free Running 4,false,Neurospora crassa,Columbia (Col),Wild Type,4,Robust stock,TAG,Luc
35,Spores,unquantified,seedling,7,Pcbox,LL4,Free Running 4,false,Neurospora crassa,Columbia (Col),Wild Type,4,Robust stock,TAG,Luc
36,Spores,unquantified,seedling,7,Pcbox,LL4,Free Running 4,false,Neurospora crassa,Columbia (Col),Wild Type,4,Robust stock,TAG,Luc
37,Spores,unquantified,seedling,7,Pcbox,LL5,Free Running 5,false,Neurospora crassa,Columbia (Col),Wild Type,2,Robust stock,TAG,Luc
38,Spores,unquantified,seedling,7,Pcbox,LL5,Free Running 5,false,Neurospora crassa,Columbia (Col),Wild Type,2,Robust stock,TAG,Luc
39,Spores,unquantified,seedling,7,Pcbox,LL5,Free Running 5,false,Neurospora crassa,Columbia (Col),Wild Type,2,Robust stock,TAG,Luc
40,Spores,unquantified,seedling,7,Pcbox,LL5,Free Running 5,false,Neurospora crassa,Columbia (Col),Wild Type,17,Robust stock,TAG,Luc
41,Spores,unquantified,seedling,7,Pcbox,LL5,Free Running 5,false,Neurospora crassa,Columbia (Col),Wild Type,17,Robust stock,TAG,Luc
42,Spores,unquantified,seedling,7,Pcbox,LL5,Free Running 5,false,Neurospora crassa,Columbia (Col),Wild Type,17,Robust stock,TAG,Luc
43,Spores,unquantified,seedling,7,Pcbox,LL5,Free Running 5,false,Neurospora crassa,Columbia (Col),Wild Type,4,Robust stock,TAG,Luc
44,Spores,unquantified,seedling,7,Pcbox,LL5,Free Running 5,false,Neurospora crassa,Columbia (Col),Wild Type,4,Robust stock,TAG,Luc
45,Spores,unquantified,seedling,7,Pcbox,LL5,Free Running 5,false,Neurospora crassa,Columbia (Col),Wild Type,4,Robust stock,TAG,Luc

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Creators and Submitter

Creators

Not specified

Additional credit

Felipe Munoz

Submitter

Daniel Thedie

License

Creative Commons Attribution 4.0 International (CC-BY-4.0)

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Views: 75 Downloads: 3

Created: 19th Jun 2026 at 09:46

Last updated: 19th Jun 2026 at 09:46

Version History

Version 1 (earliest) Created 19th Jun 2026 at 09:46 by Daniel Thedie

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Daniel Thedie

Projects: Millar group, BioDare1

Institutions: University of Edinburgh, School of Biological Sciences, University of Edinburgh

https://orcid.org/0000-0002-1352-7245

Expertise: Data Management, Python, R, Programming, microscopy, fluorescence protein fusions, Software Engineering

Tools: Data Management, Python, R, Fluorescence and confocal microscopy, Time-lapse fluorescence microscopy Flow cytometry, Fluorecence based reporter gene analyses/single cell analyses

Research Software Engineer in the Biological Research Data Management team (BioRDM) at the University of Edinburgh.

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Centre for Engineering Biology (prev. SynthSys)

The Centre for Engineering Biology is the University of Edinburgh's research organisation in interdisciplinary, Synthetic and Systems Biology, founded in 2023 as the successor to SynthSys, itself founded in 2012 as the successor to the Centre for Systems Biology at Edinburgh (CSBE). CSBE was newly founded in 2007. The Centre for Engineering Biology is a hub organisation that links across multiple, major funding awards, including an Engineering Biology Mission Hub, and EPSRC C-loop.

Projects: Millar group, PHYTOCAL: Phytochrome Control of Resource Allocation and Growth in Arabidopsis and in Brassicaceae crops, TiMet, POP - the Parameter Optimisation Problem, Regulation of flowering time in natural conditions, PlaSMo model repository, BioDare1

Web page: https://biology.ed.ac.uk/centre-engineering-biology

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BioDare1