phenodata_20210920.txt Version 1
_p_SUSPHIRE/_I_T22_SxPv2/
SEEK ID: https://fairdomhub.org/data_files/5585?version=1
Filename:
phenodata_20210920.txt
Format: Plain text document
Size: 9.06 KB
SampleID SampleName Species PlantLine PlantGeneration PlantOrigin TransgeneGBCode(t_for_TransientExpression_s_for_StableExpression) Study DateInSoil DaySampled DateAnalyzed SampledMaterial HexadecenalContent(a.u.) Hexadecen-1-olContent(a.u.) HexadecenylacetateContent(a.u.) HexadecanolContent(a.u.) HexadecanylacetateContent(a.u.) MetaboliteContentCategory Comments SPT001 GP_1_R1 Nicotiana benthamiana GP_1 0 GP_1 GB3897(s)_GB2762(t)_GB2085(t) P1_TransgenicStableSxPv2 30.06.2021 28.07.2021 14.09.2021 Agroinfiltrated_dCasEV_CorrectGuide_3rd_youngest_and_fully_expanded_leaves 1961 12849 n.d. 29100 n.d. LowProducer SPT002 GP_3_R1 Nicotiana benthamiana GP_3 0 GP_3 GB3897(s)_GB2762(t)_GB2085(t) P1_TransgenicStableSxPv2 30.06.2021 28.07.2021 21.09.2021 Agroinfiltrated_dCasEV_CorrectGuide_3rd_youngest_and_fully_expanded_leaves 1121 45453 4293 96711 n.d. MediumProducer SPT003 GP_3_NEG_R1 Nicotiana benthamiana GP_3 0 GP_3 GB3897(s)_GB2762(t) P1_TransgenicStableSxPv2 30.06.2021 28.07.2021 21.09.2021 Agroinfiltrated_dCasEV_INcorrectguide_3rd_youngest_and_fully_expanded_leaves n.d. n.d. n.d. n.d. n.d. NA SPT004 GP_12_R1 Nicotiana benthamiana GP_12 0 GP_12 GB3897(s)_GB2762(t)_GB2085(t) P1_TransgenicStableSxPv2 26.07.2021 13.08.2021 21.09.2021 Agroinfiltrated_dCasEV_CorrectGuide_3rd_youngest_and_fully_expanded_leaves n.d. 8091 83211 n.d. n.d. LowProducer SPT005 GP_12_NEG_R1 Nicotiana benthamiana GP_12 0 GP_12 GB3897(s)_GB2762(t) P1_TransgenicStableSxPv2 26.07.2021 13.08.2021 21.09.2021 Agroinfiltrated_dCasEV_INcorrectguide_3rd_youngest_and_fully_expanded_leaves n.d. n.d. n.d. n.d. n.d. NA SPT006 GP_13_R1 Nicotiana benthamiana GP_13 0 GP_13 GB3897(s)_GB2762(t)_GB2085(t) P1_TransgenicStableSxPv2 26.07.2021 13.08.2021 21.09.2021 Agroinfiltrated_dCasEV_CorrectGuide_3rd_youngest_and_fully_expanded_leaves n.d. 9093 97535 n.d. n.d. LowProducer SPT007 GP_13_NEG_R1 Nicotiana benthamiana GP_13 0 GP_13 GB3897(s)_GB2762(t) P1_TransgenicStableSxPv2 26.07.2021 13.08.2021 21.09.2021 Agroinfiltrated_dCasEV_INcorrectguide_3rd_youngest_and_fully_expanded_leaves n.d. n.d. n.d. n.d. n.d. NA SPT008 GP_15_R1 Nicotiana benthamiana GP_15 0 GP_15 GB3897(s)_GB2762(t)_GB2085(t) P1_TransgenicStableSxPv2 26.07.2021 13.08.2021 13.10.2021 Agroinfiltrated_dCasEV_CorrectGuide_3rd_youngest_and_fully_expanded_leaves 5024 129455 n.d. n.d. n.d. HighProducer SPT009 GP_15_NEG_R1 Nicotiana benthamiana GP_15 0 GP_15 GB3897(s)_GB2762(t) P1_TransgenicStableSxPv2 26.07.2021 13.08.2021 13.10.2021 Agroinfiltrated_dCasEV_INcorrectguide_3rd_youngest_and_fully_expanded_leaves n.d. n.d. n.d. n.d. n.d. NA SPT010 GP_18_R1 Nicotiana benthamiana GP_18 0 GP_18 GB3897(s)_GB2762(t)_GB2085(t) P1_TransgenicStableSxPv2 26.07.2021 13.08.2021 14.09.2021 Agroinfiltrated_dCasEV_CorrectGuide_3rd_youngest_and_fully_expanded_leaves 2590 20441 195741 n.d. n.d. LowProducer SPT011 GP_18_NEG_R1 Nicotiana benthamiana GP_18 0 GP_18 GB3897(s)_GB2762(t) P1_TransgenicStableSxPv2 26.07.2021 13.08.2021 13.10.2021 Agroinfiltrated_dCasEV_INcorrectguide_3rd_youngest_and_fully_expanded_leaves n.d. n.d. n.d. n.d. n.d. NA SPT012 GP_20_R1 Nicotiana benthamiana GP_20 0 GP_20 GB3897(s)_GB2762(t)_GB2085(t) P1_TransgenicStableSxPv2 26.07.2021 13.08.2021 8.10.2021 Agroinfiltrated_dCasEV_CorrectGuide_3rd_youngest_and_fully_expanded_leaves 4015 178014 n.d. n.d. n.d. HighProducer SPT013 Cpos_R1 Nicotiana benthamiana WT NA WT_TransientExpression_GP_CorrectGuide GB3897(s)_GB2762(t)_GB2085(t)_GB1838(t) P1_TransgenicStableSxPv2 NA 13.08.2021 20.09.2021 Agroinfiltrated_NGP_dCasEV_CorrectGuide_3rd_youngest_and_fully_expanded_leaves 58917 10478213 4507973 6573996 849959 VeryHighProduction SPT014 Cneg_R1 Nicotiana benthamiana WT NA WT_TransientExpression_GP_INcorrectGuide GB3897(s)_GB2762(t)_GB2085(t)_GB1724(t) P1_TransgenicStableSxPv2 NA 13.08.2021 22.09.2021 Agroinfiltrated_NGP_dCasEV_INcorrectGuide_3rd_youngest_and_fully_expanded_leaves n.d. n.d. n.d. n.d. n.d. NA SPT015 Cneg_P19_R1 Nicotiana benthamiana WT NA WT_TransientExpression_P19 GB2762(t) P1_TransgenicStableSxPv2 NA 13.08.2021 20.09.2021 Agroinfiltrated_P19_3rd_youngest_and_fully_expanded_leaves n.d. n.d. n.d. n.d. n.d. NA SPT016 Cpos_SxPv12_200921_1 Nicotiana benthamiana WT NA MIX_SxPv12 NA P1_TransgenicStableSxPv2 NA NA 20.09.2021 3rd_youngest_and_fully_expanded_leaves 16020 590033 161602 272957 44675 NA SPT017 Cpos_SxPv12_210921_1 Nicotiana benthamiana WT NA MIX_SxPv12 NA P1_TransgenicStableSxPv2 NA NA 21.09.2021 3rd_youngest_and_fully_expanded_leaves 17406 605909 202292 281538 43776 NA SPT018 Cpos_SxPv12_210921_2 Nicotiana benthamiana WT NA MIX_SxPv12 NA P1_TransgenicStableSxPv2 NA NA 21.09.2021 3rd_youngest_and_fully_expanded_leaves 19656 884408 118644 377230 42321 NA SPT019 Cpos_SxPv12_081021_1 Nicotiana benthamiana WT NA MIX_SxPv12 NA P1_TransgenicStableSxPv2 NA NA 8.10.2021 3rd_youngest_and_fully_expanded_leaves 16585 399218 25617 175598 27725 NA SPT020 Cpos_SxPv12_081021_2 Nicotiana benthamiana WT NA MIX_SxPv12 NA P1_TransgenicStableSxPv2 NA NA 8.10.2021 3rd_youngest_and_fully_expanded_leaves 14333 438033 * 148558 22546 NA *hexadecanol_peak_not_visible_due_to_the_huge_peak_of_hexadecen-1-ol SPT021 Cpos_SxPv12_131021_1 Nicotiana benthamiana WT NA MIX_SxPv12 NA P1_TransgenicStableSxPv2 NA NA 13.10.2021 3rd_youngest_and_fully_expanded_leaves 12842 330833 * 116396 22239 NA *hexadecanol_peak_not_visible_due_to_the_huge_peak_of_hexadecen-1-ol SPT022 WhiteBuff_210921 NA NA NA NA NA P1_TransgenicStableSxPv2 NA NA 21.09.2021 NA n.d. n.d. n.d. n.d. n.d. NA SPT023 WhiteBuff_081021 NA NA NA NA NA P1_TransgenicStableSxPv2 NA NA 8.10.2021 NA n.d. n.d. n.d. n.d. n.d. NA SPT024 WhiteFinal_081021 NA NA NA NA NA P1_TransgenicStableSxPv2 NA NA 8.10.2021 NA n.d. n.d. n.d. n.d. n.d. NA SPT025 WhiteFinal_210921 NA NA NA NA NA P1_TransgenicStableSxPv2 NA NA 21.09.2021 NA n.d. n.d. n.d. n.d. n.d. NA SPT026 WhiteInitial_081021 NA NA NA NA NA P1_TransgenicStableSxPv2 NA NA 8.10.2021 NA n.d. n.d. n.d. n.d. n.d. NA SPT027 WhiteInitial_200921 NA NA NA NA NA P1_TransgenicStableSxPv2 NA NA 20.09.2021 NA n.d. n.d. n.d. n.d. n.d. NA SPT028 WhiteInitial_210921 NA NA NA NA NA P1_TransgenicStableSxPv2 NA NA 21.09.2021 NA n.d. n.d. n.d. n.d. n.d. NA SPT029 WhiteInitial_140921 NA NA NA NA NA P1_TransgenicStableSxPv2 NA NA 14.10.2021 NA n.d. n.d. n.d. n.d. n.d. NA SPT030 WhiteFinal_140921 NA NA NA NA NA P1_TransgenicStableSxPv2 NA NA 14.10.2021 NA n.d. n.d. n.d. n.d. n.d. NA SPT031 NGP_1_R1 Nicotiana benthamiana NGP_1 0 NGP_1 GB3898(s)_GB2762(t)_GB2085(t)_GB1838(t) P1_TransgenicStableSxPv2 30.06.2021 15.09.2021 14.09.2021 Agroinfiltrated_correctguide_3rd_youngest_and_fully_expanded_leaves n.d. 5288 39391 1417 n.d. LowProducer SPT032 NGP_15_R1 Nicotiana benthamiana NGP_15 0 NGP_15 GB3898(s)_GB2762(t)_GB2085(t)_GB1838(t) P1_TransgenicStableSxPv2 18.08.2021 15.09.2021 21.09.2021 Agroinfiltrated_correctguide_3rd_youngest_and_fully_expanded_leaves n.d. 7590 135756 n.d. n.d. LowProducer SPT033 NGP_15_NEG_R1 Nicotiana benthamiana NGP_15 0 NGP_15 GB3898(s)_GB2762(t)_GB2085(t)_GB1724(t) P1_TransgenicStableSxPv2 18.08.2021 15.09.2021 21.09.2021 Agroinfiltrated_INcorrectguide_3rd_youngest_and_fully_expanded_leaves n.d. n.d. n.d. n.d. n.d. NA SPT034 NGP_17_R1 Nicotiana benthamiana NGP_17 0 NGP_17 GB3898(s)_GB2762(t)_GB2085(t)_GB1838(t) P1_TransgenicStableSxPv2 18.08.2021 15.09.2021 21.09.2021 Agroinfiltrated_correctguide_3rd_youngest_and_fully_expanded_leaves n.d. 24576 153188 3991 n.d. LowProducer SPT035 NGP_17_NEG_R1 Nicotiana benthamiana NGP_17 0 NGP_17 GB3898(s)_GB2762(t)_GB2085(t)_GB1724(t) P1_TransgenicStableSxPv2 18.08.2021 15.09.2021 20.09.2021 Agroinfiltrated_INcorrectguide_3rd_youngest_and_fully_expanded_leaves n.d. n.d. n.d. n.d. n.d. NA SPT036 NGP_22_R1 Nicotiana benthamiana NGP_22 0 NGP_22 GB3898(s)_GB2762(t)_GB2085(t)_GB1838(t) P1_TransgenicStableSxPv2 18.08.2021 15.09.2021 20.09.2021 Agroinfiltrated_correctguide_3rd_youngest_and_fully_expanded_leaves 2167 72124 562710 14949 40509 MediumProducer SPT037 NGP_22_NEG_R1 Nicotiana benthamiana NGP_22 0 NGP_22 GB3898(s)_GB2762(t)_GB2085(t)_GB1724(t) P1_TransgenicStableSxPv2 18.08.2021 15.09.2021 21.09.2021 Agroinfiltrated_INcorrectguide_3rd_youngest_and_fully_expanded_leaves n.d. n.d. n.d. n.d. n.d. NA SPT038 NGP_23_R1 Nicotiana benthamiana NGP_23 0 NGP_23 GB3898(s)_GB2762(t)_GB2085(t)_GB1838(t) P1_TransgenicStableSxPv2 18.08.2021 15.09.2021 21.09.2021 Agroinfiltrated_correctguide_3rd_youngest_and_fully_expanded_leaves n.d. 10153 153140 n.d. n.d. LowProducer SPT039 NGP_23_NEG_R1 Nicotiana benthamiana NGP_23 0 NGP_23 GB3898(s)_GB2762(t)_GB2085(t)_GB1724(t) P1_TransgenicStableSxPv2 18.08.2021 15.09.2021 20.09.2021 Agroinfiltrated_INcorrectguide_3rd_youngest_and_fully_expanded_leaves n.d. n.d. n.d. n.d. n.d. NA SPT040 EV_NGP_9_R1 Nicotiana benthamiana EV_NGP_9 0 EV_NGP_9 GB2618(s)_GB3898(s)_GB2762(t)_GB1838(t) 18.08.2021 14.09.2021 22.09.2021 Agroinfiltrated_correctguide_3rd_youngest_and_fully_expanded_leaves 0 11335 51646 0 11865 LowProducer SPT041 EV_NGP_9_NEG_R1 Nicotiana benthamiana EV_NGP_9 0 EV_NGP_9 GB2618(s)_GB3898(s)_GB2762(t)_GB1724(t) 18.08.2021 14.09.2021 22.09.2021 Agroinfiltrated_INcorrectguide_3rd_youngest_and_fully_expanded_leaves 0 0 0 0 0 NA
Export PNG
Creators and Submitter
Activity
Views: 472 Downloads: 102
Created: 12th Apr 2022 at 14:08
Last updated: 7th Nov 2024 at 10:03
AttributionsNone
Version History
Version 1 (earliest) Created 12th Apr 2022 at 14:08 by Marko Petek
No revision comments
Related items
Advanced People list for this Data file with search and filtering
https://orcid.org/0000-0003-3644-7827PhD in Biotechnology, Research Associate at Department of Biotechnology and Systems Biology, National Institute of Biology
Advanced Programmes list for this Data file with search and filtering
National Institute of Biology, Department of Biotechnology and Systems Biology projects
Projects: HYp - Spatiotemporal analysis of hypersensitive response to Potato virus Y in potato, pISA-tree, MOA - Multiomics analysis of potato response to Potato virus Y (PVY) infection, SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture, INDIE - Biotechnological production of sustainable indole, _p_stRT, ADAPT - Accelerated Development of multiple-stress tolerAnt PoTato, _p_RNAinVAL, tst, tst2, Playground
Web page: http://www.nib.si/eng/index.php/departments/department-of-biotechnology-and-systems-biology
Advanced Projects list for this Data file with search and filtering
SUSPHIRE aims to provide a sustainable, low-cost biomanufacturing platform for the commercial production of insect pheromones.
Synthetic biology data management spreadsheet: https://fairdomhub.org/data_files/6036
Programme: NIBSys
Public web page: http://susphire.info/susphireproject/
Start date: 1st Apr 2018
End date: 30th Sep 2021
Advanced Investigations list for this Data file with search and filtering
Short Name: T22_SxPv2 Title: Sexy Plant version 2: inducible and regulable SxP versions Description: The purpose of this investigation is to optimize the SxP version 1, with a switchable expression and increased compound release. Phenodata: ./phenodata_20210920.txt Principal investigator: Diego Orzaez License: Creative Commons Attribution 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes Institutions involved: Instituto de Biología Molecular y Celular de Plantas (IBMCP), Spain; Institute ...
Advanced Studies list for this Data file with search and filtering
Investigation files _I_T22_SxPv2
Advanced Assays list for this Data file with search and filtering
Files connected to investigation: _I_T22_SxPv2
Submitter: Marko Petek
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_T22_SxPv2
Study: Investigation files
