Filtered datset - aerobic to anaerobic transition .csv

Version 1

Gene_name,Gene_ID,2min/0min,5min/0min,10min/0min,15min/0min,20min/0min,Description
thrL,b0001,,,0.35,0.29,0.24,thr operon leader peptide
thrA,b0002,,,,,0.49,fused aspartokinase I ; homoserine dehydrogenase I
thrB,b0003,,,,0.45,0.34,homoserine kinase
thrC,b0004,,,,0.43,0.36,threonine synthase
ispH,b0029,,,,0.38,0.45,1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase - 4Fe-4S protein
rihC,b0030,,,,2.18,,ribonucleoside hydrolase 3
dapB,b0031,,,2.31,3.13,3.25,dihydrodipicolinate reductase
carA,b0032,,0.16,0.27,0.26,0.30,carbamoyl phosphate synthetase small subunit - glutamine amidotransferase
carB,b0033,,,0.34,0.38,,carbamoyl-phosphate synthase large subunit
caiF,b0034,,2.27,5.23,6.27,5.22,DNA-binding transcriptional activator
apaG,b0050,,,,0.43,0.48,protein associated with Co2+ and Mg2+ efflux
ksgA,b0051,,,,0.44,,S-adenosylmethionine-6-N' -N'-adenosyl (rRNA) dimethyltransferase
thiP,b0067,,0.21,0.14,,,fused thiamin transporter subunits of ABC superfamily: membrane components
leuD,b0071,,,0.47,0.32,0.25,3-isopropylmalate isomerase subunit
leuC,b0072,,,,0.30,0.24,3-isopropylmalate isomerase subunit - dehydratase component
leuB,b0073,,0.37,0.40,0.26,0.27,3-isopropylmalate dehydrogenase
leuA,b0074,,0.47,0.47,0.26,0.29,2-isopropylmalate synthase
guaC,b0104,,0.50,,,,GMP reductase
ampD,b0110,,,2.11,,,N-acetyl-anhydromuranmyl-L-alanine amidase
aceE,b0114,,,0.16,0.09,0.08,pyruvate dehydrogenase - decarboxylase component E1 - thiamin-binding
aceF,b0115,,,0.40,0.23,0.17,pyruvate dehydrogenase - dihydrolipoyltransacetylase component E2
lpd,b0116,,,0.20,0.09,0.11,lipoamide dehydrogenase - E3 component is part of three enzyme complexes
acnB,b0118,,,0.20,0.14,0.12,bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase
cueO,b0123,,3.59,2.41,3.61,4.25,multicopper oxidase (laccase)
gcd,b0124,,,0.44,0.48,,glucose dehydrogenase
can,b0126,,0.25,0.23,0.23,0.27,carbonic anhydrase
yadI,b0129,,2.03,2.19,2.29,2.40,predicted PTS Enzyme IIA
pcnB,b0143,,0.35,0.46,,,poly(A) polymerase I
ldcC,b0186,,,,0.47,,lysine decarboxylase 2 - constitutive
metQ,b0197,,,0.44,0.40,0.30,DL-methionine transporter subunit ; periplasmic-binding component of ABC superfamily
metI,b0198,,,0.39,0.35,0.27,DL-methionine transporter subunit ; membrane component protein of ABC superfamily
metN,b0199,,0.46,0.37,0.46,0.43,DL-methionine transporter subunit ; ATP-binding component of ABC superfamily
fadE,b0221,,,0.25,0.20,0.17,acyl coenzyme A dehydrogenase
crl,b0240,,0.38,0.40,0.46,0.36,DNA-binding transcriptional regulator
yagU,b0287,,,,0.42,0.23,conserved inner membrane protein
betI,b0313,,,0.26,,0.23,DNA-binding transcriptional repressor
yahK,b0325,,,0.41,0.29,0.34,predicted oxidoreductase - Zn-dependent and NAD(P)-binding
prpC,b0333,,,0.14,0.16,0.13,2-methylcitrate synthase
prpD,b0334,,,,0.14,0.10,2-methylcitrate dehydratase
prpE,b0335,,,0.22,0.23,0.18,predicted propionyl-CoA synthetase with ATPase domain
codB,b0336,,,,0.42,,cytosine transporter
codA,b0337,,0.47,0.41,0.46,0.39,cytosine deaminase
mhpR,b0346,,0.18,0.12,0.13,0.17,DNA-binding transcriptional activator - 3HPP-binding
frmA,b0356,,,0.47,0.46,0.43,alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase
psiF,b0384,,,0.47,0.41,0.31,conserved protein
rdgC,b0393,0.44,,,,,DNA-binding protein - non-specific
yajB,b0404,,,0.36,0.31,0.34,conserved protein
cyoE,b0428,,,0.31,0.17,0.13,protoheme IX farnesyltransferase
cyoD,b0429,,,0.16,0.08,0.07,cytochrome o ubiquinol oxidase subunit IV
cyoC,b0430,,,0.10,0.05,0.04,cytochrome o ubiquinol oxidase subunit III
cyoB,b0431,,,0.13,0.08,0.10,cytochrome o ubiquinol oxidase subunit I
cyoA,b0432,,0.16,0.11,0.09,0.10,cytochrome o ubiquinol oxidase subunit II
yajG,b0434,,,,0.49,,predicted lipoprotein
tig,b0436,,0.37,,,,peptidyl-prolyl cis/trans isomerase (trigger factor)
ybaV,b0442,,,2.27,2.49,2.12,conserved protein
ybaE,b0445,,2.21,2.15,2.42,2.14,predicted transporter subunit: periplasmic-binding component of ABC superfamily
ybaY,b0453,,,0.32,0.34,0.26,predicted outer membrane lipoprotein
copA,b0484,,5.13,11.73,15.47,22.13,copper transporter
ybaS,b0485,,,,,0.46,predicted glutaminase
ybbJ,b0488,,,2.40,2.22,,conserved inner membrane protein
purE,b0523,,0.27,0.20,0.20,0.26,N5-carboxyaminoimidazole ribonucleotide mutase
nmpC,b0553,,,2.23,2.19,,DLP12 prophage; truncated outer membrane porin (pseudogene)
borD,b0557,,0.42,,,,DLP12 prophage; predicted lipoprotein
cusS,b0570,,,,3.41,4.68,sensory histidine kinase in two-component regulatory system with CusR - senses copper ions
cusR,b0571,,2.10,2.87,4.65,5.28,DNA-binding response regulator in two-component regulatory system with CusS
cusC,b0572,,10.60,16.76,30.52,33.48,copper/silver efflux system - outer membrane component
cusF,b0573,,,25.20,30.58,43.04,periplasmic copper-binding protein
cusB,b0574,,,11.71,16.92,31.68,copper/silver efflux system - membrane fusion protein
cusA,b0575,,,2.60,3.22,4.93,copper/silver efflux system - membrane component
pheP,b0576,,0.37,0.29,,,phenylalanine transporter
entA,b0596,,,,0.34,0.31,2 -3-dihydro-2 -3-dihydroxybenzoate dehydrogenase
cstA,b0598,,,0.29,0.18,0.19,carbon starvation protein
uspG,b0607,,2.60,4.46,5.49,4.32,universal stress protein UP12
citB,b0620,,,2.09,2.03,,DNA-binding response regulator in two-component regulatory system with citA
dcuC,b0621,,7.45,16.53,15.48,14.01,anaerobic C4-dicarboxylate transport
lipA,b0628,,,0.47,,,lipoate synthase
gltK,b0653,,,0.18,,,glutamate and aspartate transporter subunit ; membrane component of ABC superfamily
gltI,b0655,,0.38,0.24,0.18,0.18,glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily
nagB,b0678,,,0.48,0.40,0.40,glucosamine-6-phosphate deaminase
ybfA,b0699,,,3.98,4.45,3.48,predicted protein
gltA,b0720,,,0.30,0.17,0.17,citrate synthase
sdhC,b0721,,0.13,0.08,0.06,0.05,succinate dehydrogenase - membrane subunit - binds cytochrome b556
sdhD,b0722,,0.19,0.11,0.10,0.10,succinate dehydrogenase - membrane subunit - binds cytochrome b556
sdhA,b0723,,0.30,0.07,0.06,0.06,succinate dehydrogenase - flavoprotein subunit
sdhB,b0724,,,0.09,0.08,0.06,succinate dehydrogenase - FeS subunit
b0725,b0725,,,0.20,,0.18,"FALSE ANNOTATION (Riley2005) - """"orf - hypothetical protein"""""
sucA,b0726,,,0.19,0.19,0.14,2-oxoglutarate decarboxylase - thiamin-requiring
sucB,b0727,,,0.30,0.15,0.14,dihydrolipoyltranssuccinase
sucC,b0728,,,0.40,0.31,0.34,succinyl-CoA synthetase - beta subunit
sucD,b0729,,,0.42,0.23,0.20,succinyl-CoA synthetase - NAD(P)-binding - alpha subunit
cydA,b0733,,,2.45,,,cytochrome d terminal oxidase - subunit I
cydB,b0734,,2.17,2.46,2.11,,cytochrome d terminal oxidase - subunit II
ybgF,b0742,,,,,0.49,predicted protein
ybgS,b0753,,,0.34,0.29,0.29,conserved protein
gpmA,b0755,,,0.31,0.16,0.17,phosphoglyceromutase 1
ybhE,b0767,,,,0.29,0.29,6-phosphogluconolactonase
ybhC,b0772,,0.43,,,,predicted pectinesterase
bioF,b0776,,,,,0.48,8-amino-7-oxononanoate synthase
moaA,b0781,,,2.36,2.45,2.07,molybdopterin biosynthesis protein A
moaB,b0782,,,2.98,3.05,2.51,molybdopterin biosynthesis protein B
moaC,b0783,,,2.37,2.46,,molybdopterin biosynthesis - protein C
moaD,b0784,,,2.38,2.28,2.29,molybdopterin synthase - small subunit
moaE,b0785,,,3.10,,,molybdopterin synthase - large subunit
ybhP,b0790,,,0.12,,0.14,predicted DNase
ybiA,b0798,,,2.17,2.47,2.06,conserved protein
glnQ,b0809,,0.31,0.15,0.18,0.15,glutamine transporter subunit ; ATP-binding component of ABC superfamily
glnP,b0810,,0.34,0.15,0.20,0.28,glutamine transporter subunit ; membrane component of ABC superfamily
glnH,b0811,,,0.26,0.19,0.18,glutamine transporter subunit ; periplasmic binding component of ABC superfamily
iaaA,b0828,,,0.47,,0.46,L-asparaginase
yliH,b0836,2.59,4.37,6.37,7.87,8.47,conserved protein
dacC,b0839,,,0.47,,,D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)
ybjM,b0848,,3.11,3.34,3.22,2.97,predicted inner membrane protein
potG,b0855,,0.35,0.19,0.18,0.18,putrescine transporter subunit: ATP-binding component of ABC superfamily
ybjP,b0865,,,,0.43,0.39,predicted lipoprotein
poxB,b0871,,,0.39,0.38,0.31,pyruvate dehydrogenase (pyruvate oxidase) - thiamin-dependent - FAD-binding
hcp,b0873,,2.98,3.30,4.02,2.84,hybrid-cluster [4Fe-2S-2O] protein in anaerobic terminal reductases
cspD,b0880,,,2.09,2.17,,cold shock protein homolog
infA,b0884,0.36,0.40,,,,translation initiation factor IF-1
dmsB,b0895,,,7.97,7.19,5.19,dimethyl sulfoxide reductase - anaerobic - subunit B
dmsC,b0896,,,4.21,4.86,,dimethyl sulfoxide reductase - anaerobic - subunit C
ycaC,b0897,,,0.43,0.34,0.23,predicted hydrolase
focA,b0904,,,2.46,2.30,2.11,formate transporter
aroA,b0908,,0.34,0.32,0.33,0.45,5-enolpyruvylshikimate-3-phosphate synthetase
ycbJ,b0919,,4.81,5.76,6.67,5.52,conserved protein
aspC,b0928,,0.48,0.50,0.45,0.49,aspartate aminotransferase - PLP-dependent
pepN,b0932,,,,0.48,0.36,aminopeptidase N
yccJ,b1003,,,,0.48,0.30,predicted protein
wrbA,b1004,,,0.47,0.33,0.23,predicted flavoprotein in Trp regulation
putP,b1015,,,0.36,0.47,,proline:sodium symporter
yceK,b1050,,,,,0.38,predicted lipoprotein
yceJ,b1057,,,,0.29,0.18,predicted cytochrome b561
yceP,b1060,,3.86,7.05,9.98,7.18,predicted protein
pyrC,b1062,0.39,0.21,0.17,0.25,0.27,dihydro-orotase
grxB,b1064,,,,,0.44,glutaredoxin 2 (Grx2)
flgD,b1075,,,,,0.50,flagellar hook assembly protein
ycfH,b1100,,,0.40,0.36,0.28,predicted metallodependent hydrolase
hinT,b1103,,,,,0.49,purine nucleoside phosphoramidase
potD,b1123,,,,0.47,,polyamine transporter subunit ; periplasmic-binding component of ABC superfamily
potC,b1124,,,0.48,0.40,0.39,polyamine transporter subunit ; membrane component of ABC superfamily
potB,b1125,,0.49,,,,polyamine transporter subunit ; membrane component of ABC superfamily
purB,b1131,,0.39,0.33,0.32,0.28,adenylosuccinate lyase
hflD,b1132,,0.24,0.26,0.28,0.39,predicted lysogenization regulator
icd,b1136,,,0.34,0.23,0.17,e14 prophage; isocitrate dehydrogenase - specific for NADP+
minE,b1174,,,,0.49,0.48,cell division topological specificity factor
ycgB,b1188,,,0.20,0.14,0.11,conserved protein
dadA,b1189,,0.40,0.17,0.15,0.15,D-amino acid dehydrogenase
dadX,b1190,,,0.16,0.17,0.10,alanine racemase 2 - PLP-binding
ychF,b1203,,0.48,0.48,0.47,,predicted GTP-binding protein
ychH,b1205,2.62,2.53,2.25,2.17,,predicted inner membrane protein
narG,b1224,,5.13,14.50,12.57,9.41,nitrate reductase 1 - alpha subunit
narJ,b1226,,,6.76,5.80,5.34,molybdenum-cofactor-assembly chaperone subunit (delta subunit) of nitrate reductase 1
narI,b1227,,,2.66,2.57,2.35,nitrate reductase 1 - gamma (cytochrome b(NR)) subunit
adhE,b1241,,2.47,2.34,2.09,,fused acetaldehyde-CoA dehydrogenase ; iron-dependent alcohol dehydrogenase ; pyruvate-formate lyase deactivase
oppA,b1243,,,5.75,7.31,4.63,oligopeptide transporter subunit ; periplasmic-binding component of ABC superfamily
oppB,b1244,,,7.61,5.72,5.38,oligopeptide transporter subunit ; membrane component of ABC superfamily
oppC,b1245,,,5.58,5.77,5.56,oligopeptide transporter subunit ; membrane component of ABC superfamily
oppD,b1246,,,6.13,6.63,6.55,oligopeptide transporter subunit ; ATP-binding component of ABC superfamily
tonB,b1252,,,,0.37,0.40,membrane spanning protein in TonB-ExbB-ExbD complex
ompW,b1256,4.04,6.48,6.78,5.38,3.83,outer membrane protein W
yciF,b1258,,,,0.45,0.32,conserved protein
trpB,b1261,,,0.39,0.39,0.37,tryptophan synthase - beta subunit
trpC,b1262,,,0.38,0.36,0.27,fused indole-3-glycerolphosphate synthetase ; N-(5-phosphoribosyl)anthranilate isomerase
trpD,b1263,,0.39,0.33,0.37,0.27,fused glutamine amidotransferase (component II) of anthranilate synthase ; anthranilate phosphoribosyl transferase
trpE,b1264,,0.31,0.39,0.33,0.29,component I of anthranilate synthase
acnA,b1276,,,0.47,0.31,0.23,aconitate hydratase 1
sapF,b1290,,,2.16,,,predicted antimicrobial peptide transporter subunit ; ATP-binding component of ABC superfamily
pspA,b1304,,,2.25,2.55,2.61,regulatory protein for phage-shock-protein operon
pspB,b1305,,,2.84,2.75,3.15,DNA-binding transcriptional regulator of psp operon
pspC,b1306,,,2.01,2.20,,DNA-binding transcriptional activator
pspE,b1308,,,2.83,3.52,2.53,thiosulfate:cyanide sulfurtransferase (rhodanese)
tpx,b1324,,0.43,0.19,0.13,0.11,lipid hydroperoxide peroxidase
ynaJ,b1332,,,0.49,,,predicted inner membrane protein
uspE,b1333,,2.57,2.46,2.64,,stress-induced protein
uspF,b1376,,,2.97,2.56,,stress-induced protein - ATP-binding protein
paaJ,b1397,,0.42,0.32,0.30,0.37,predicted beta-ketoadipyl CoA thiolase
paaX,b1399,,0.48,0.35,0.34,0.39,DNA-binding transcriptional repressor of phenylacetic acid degradation - aryl-CoA responsive
aldA,b1415,,0.21,0.06,0.06,0.08,aldehyde dehydrogenase A - NAD-linked
gapC,b1416.M,,0.47,,,,glyceraldehyde-3-phosphate dehydrogenase - Pseudogene?
ydcI,b1422,,0.30,0.33,0.30,0.42,predicted DNA-binding transcriptional regulator
ydcH,b1426,,2.43,3.30,4.46,4.09,predicted protein
ydcS,b1440,,,0.47,0.34,0.43,predicted spermidine/putrescine transporter subunit ; periplasmic-binding component of ABC superfamily
ydcU,b1442,,,0.34,,,predicted spermidine/putrescine transporter subunit ; membrane component of ABC superfamily
ydcV,b1443,,,0.26,0.13,0.09,predicted spermidine/putrescine transporter subunit ; membrane component of ABC superfamily
ydcW,b1444,,,0.45,0.41,0.34,medium chain aldehyde dehydrogenase
yncE,b1452,,,,0.41,0.47,conserved protein
yncG,b1454,,,,,0.31,predicted enzyme
adhP,b1478,,,,0.22,0.25,alcohol dehydrogenase - 1-propanol preferring
bdm,b1481,,,,,0.46,biofilm-dependent modulation protein
osmC,b1482,,,,0.42,0.23,osmotically inducible - stress-inducible membrane protein
ddpD,b1484,,,0.26,0.20,0.22,D-ala-D-ala transporter subunit ; ATP-binding component of ABC superfamily
ddpX,b1488,,,0.38,0.38,0.38,D-ala-D-ala dipeptidase - Zn-dependent
yddV,b1490,,,,,0.49,predicted diguanylate cyclase
ydeK,b1510,,,2.08,,,predicted lipoprotein
tam,b1519,,,0.40,0.38,,trans-aconitate methyltransferase
ydfZ,b1541,,2.08,5.63,6.13,7.10,conserved protein
cspB,b1557,,,,,2.65,Qin prophage; cold shock protein
ynfE,b1587,,3.37,6.66,5.98,6.08,oxidoreductase subunit
ynfF,b1588,,,10.18,10.32,9.11,oxidoreductase subunit
ynfG,b1589,,,8.20,9.15,8.52,oxidoreductase - Fe-S subunit
ynfH,b1590,,,9.01,10.18,9.12,oxidoreductase - membrane subunit
dmsD,b1591,,,,2.79,,twin-argninine leader-binding protein for DmsA and TorA
ynfK,b1593,,9.18,9.19,10.55,7.52,predicted dethiobiotin synthetase
fumC,b1611,,,0.23,0.14,0.14,fumarate hydratase (fumarase C) -aerobic Class II
fumA,b1612,,0.39,0.22,0.19,0.17,fumarate hydratase (fumarase A) - aerobic Class I
hdhA,b1619,,,,,0.36,7-alpha-hydroxysteroid dehydrogenase - NAD-dependent
rsxC,b1629,,0.42,,,,fused predicted 4Fe-4S ferredoxin-type protein ; conserved protein
ydgR,b1634,,,2.37,2.59,2.37,predicted transporter
ydhH,b1640,,,2.19,,,conserved protein
ydhD,b1654,,,,0.48,0.49,conserved protein
purR,b1658,0.26,0.26,0.35,0.31,0.32,DNA-binding transcriptional repressor - hypoxanthine-binding
cfa,b1661,,,,,0.34,cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase)
ydhU,b1670,,,,2.22,2.29,predicted cytochrome
ydhW,b1672,,,,3.56,4.13,predicted protein
ydhV,b1673,,,2.59,4.62,4.23,predicted oxidoreductase
ydhY,b1674,,,,8.37,,predicted 4Fe-4S ferridoxin-type protein
sufS,b1680,,,,0.50,0.40,selenocysteine lyase - PLP-dependent
sufC,b1682,,,0.45,0.31,0.32,component of SufBCD complex - ATP-binding component of ABC superfamily
sufB,b1683,,,0.41,0.31,0.35,component of SufBCD complex
ydiH,b1685,,,2.38,2.18,,predicted protein
ydiU,b1706,,,,0.49,,conserved protein
btuE,b1710,,,0.45,,,predicted glutathione peroxidase
ydiZ,b1724,,,,,0.46,predicted protein
yniA,b1725,,2.51,2.41,2.25,2.09,predicted phosphotransferase/kinase
ydjN,b1729,,,,0.38,0.29,predicted transporter
osmE,b1739,,,0.46,0.37,0.25,DNA-binding transcriptional activator
astA,b1747,,,0.24,,,arginine succinyltransferase
astC,b1748,,0.39,0.17,0.22,0.25,succinylornithine transaminase - PLP-dependent
xthA,b1749,,,,,0.48,exonuclease III
ydjY,b1751,,,3.22,3.35,3.54,predicted protein
ydjZ,b1752,,,2.66,2.60,2.58,conserved inner membrane protein
ynjA,b1753,,,2.21,2.11,2.15,conserved protein
ynjE,b1757,,,2.94,2.93,2.75,predicted thiosulfate sulfur transferase
gdhA,b1761,,,,2.10,2.17,glutamate dehydrogenase - NADP-specific
yeaA,b1778,,0.18,0.13,0.13,0.11,methionine sulfoxide reductase B
mipA,b1782,,0.33,0.41,0.40,0.42,scaffolding protein for murein synthesizing machinery
yeaG,b1783,,,0.32,0.20,0.20,conserved protein with nucleoside triphosphate hydrolase domain
yeaQ,b1795,,,0.36,0.32,0.25,conserved inner membrane protein
manX,b1817,,,2.54,2.46,,fused mannose-specific PTS enzymes: IIA component ; IIB component
manY,b1818,,,3.17,2.46,2.67,mannose-specific enzyme IIC component of PTS
manZ,b1819,,2.07,2.98,3.20,3.29,mannose-specific enzyme IID component of PTS
yebN,b1821,,,,2.30,2.14,conserved inner membrane protein
yebV,b1836,,,,,0.31,predicted protein
yebE,b1846,,,,2.47,3.30,conserved protein
pykA,b1854,,,2.58,2.36,2.13,pyruvate kinase II
otsA,b1896,,,0.28,0.25,0.30,trehalose-6-phosphate synthase
otsB,b1897,,,0.37,0.30,0.36,trehalose-6-phosphate phosphatase - biosynthetic
araF,b1901,,,,2.28,,L-arabinose transporter subunit ; periplasmic-binding component of ABC superfamily
yecI,b1902,,,3.80,6.03,4.45,predicted ferritin-like protein
ftn,b1905,,,,2.73,2.14,ferritin iron storage protein (cytoplasmic)
yecH,b1906,,,3.14,3.15,2.77,predicted protein
yecA,b1908,,,,2.03,,conserved metal-binding protein
yecF,b1915,,,2.07,2.15,,predicted protein
fliY,b1920,,,0.30,0.27,0.23,cystine transporter subunit ; periplasmic-binding component of ABC superfamily
yodD,b1953,,,0.40,,0.25,predicted protein
yedP,b1955,,,0.43,,,conserved protein
yodB,b1974,,,,0.49,,predicted cytochrome
amn,b1982,,,0.46,0.43,0.45,AMP nucleosidase
yeeD,b2012,,,0.35,0.35,0.27,conserved protein
yeeE,b2013,,,0.28,0.28,0.26,predicted inner membrane protein
hisD,b2020,,,4.77,2.64,,bifunctional histidinal dehydrogenase and histidinol dehydrogenase
hisC,b2021,,,5.62,2.41,,histidinol-phosphate aminotransferase
hisH,b2023,,,2.53,,,imidazole glycerol phosphate synthase - glutamine amidotransferase subunit with HisF
hisF,b2025,,,2.13,2.39,,imidazole glycerol phosphate synthase - catalytic subunit with HisH
hisI,b2026,,,,2.11,,fused phosphoribosyl-AMP cyclohydrolase ; phosphoribosyl-ATP pyrophosphatase
cld,b2027,0.49,,,,,regulator of length of O-antigen component of lipopolysaccharide chains
yegP,b2080,,,,0.27,0.17,predicted protein
yegS,b2086,,,0.36,0.37,0.32,conserved protein
fbaB,b2097,,,,0.38,0.29,fructose-bisphosphate aldolase class I
yehZ,b2131,,,0.32,0.41,0.40,predicted transporter subunit: periplasmic-binding component of ABC superfamily
yeiT,b2146,,2.01,5.90,9.25,10.45,predicted oxidoreductase
mglC,b2148,,0.47,0.23,0.29,0.28,methyl-galactoside transporter subunit ; membrane component of ABC superfamily
mglA,b2149,,0.37,0.22,0.24,0.31,fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components
mglB,b2150,,0.13,0.04,0.04,0.04,methyl-galactoside transporter subunit ; periplasmic-binding component of ABC superfamily
folE,b2153,,,0.47,0.40,0.35,GTP cyclohydrolase I
fruA,b2167,,2.34,2.59,,,fused fructose-specific PTS enzymes: IIBcomponent ; IIC components
fruK,b2168,,3.47,2.54,,,fructose-1-phosphate kinase
fruB,b2169,,3.21,2.42,,,fused fructose-specific PTS enzymes: IIA component ; HPr component
yeiP,b2171,0.49,0.39,0.46,0.43,,predicted elongtion factor
spr,b2175,0.38,,,,,predicted peptidase - outer membrane lipoprotein
yejG,b2181,,0.44,0.36,,,predicted protein
ccmA,b2201,,2.57,3.57,3.58,3.56,heme exporter subunit ; ATP-binding component of ABC superfamily
napC,b2202,,2.96,3.84,3.85,3.47,nitrate reductase - cytochrome c-type -periplasmic
napB,b2203,,,,2.06,2.30,nitrate reductase - small - cytochrome C550 subunit - periplasmic
napH,b2204,,,2.87,4.51,4.39,ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB)
napG,b2205,,,2.91,3.43,3.74,ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB)
napD,b2207,,,2.74,3.14,3.10,assembly protein for periplasmic nitrate reductase
nrdA,b2234,,0.36,,0.39,0.49,ribonucleoside diphosphate reductase 1 - alpha subunit
glpB,b2242,,,2.81,,,sn-glycerol-3-phosphate dehydrogenase (anaerobic) - membrane anchor subunit
yfaW,b2247,,,,,2.07,predicted enolase
yfaX,b2248,,,2.82,2.21,2.44,predicted DNA-binding transcriptional regulator
menD,b2264,,,2.60,2.02,,bifunctional 2-oxoglutarate decarboxylase and SHCHC synthase
elaB,b2266,,,0.24,0.17,0.12,conserved protein
yfbL,b2271,,,2.48,,,predicted peptidase
nuoN,b2276,,,,,0.35,NADH:ubiquinone oxidoreductase - membrane subunit N
nuoM,b2277,,,,0.41,0.24,NADH:ubiquinone oxidoreductase - membrane subunit M
nuoL,b2278,,,,0.48,0.40,NADH:ubiquinone oxidoreductase - membrane subunit L
nuoK,b2279,,,,0.28,0.27,NADH:ubiquinone oxidoreductase - membrane subunit K
nuoI,b2281,,,,0.36,0.32,NADH:ubiquinone oxidoreductase - chain I
nuoG,b2283,,,,0.41,0.43,NADH:ubiquinone oxidoreductase - chain G
nuoF,b2284,,,0.45,0.27,0.28,NADH:ubiquinone oxidoreductase - chain F
nuoE,b2285,,,0.48,0.50,0.45,NADH:ubiquinone oxidoreductase - chain E
yfbS,b2292,,,2.28,2.31,,predicted transporter
ackA,b2296,,,2.44,2.55,2.38,acetate kinase A and propionate kinase 2
yfcG,b2302,,,0.38,,0.47,predicted glutathione S-transferase
hisP,b2306,0.50,0.46,0.37,0.49,0.42,histidine/lysine/arginine/ornithine transporter subunit ; ATP-binding component of ABC superfamily
hisM,b2307,,,0.33,0.49,0.50,histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily
hisJ,b2309,,0.37,0.31,0.23,0.19,histidine/lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily
argT,b2310,,0.17,0.09,0.08,0.10,lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily
purF,b2312,,,0.40,0.30,0.39,amidophosphoribosyltransferase
cvpA,b2313,,0.28,0.26,0.33,0.24,membrane protein required for colicin V production
aroC,b2329,,,,2.07,2.63,chorismate synthase
yfcX,b2341,,,0.34,0.34,0.37,fused enoyl-CoA hydratase and epimerase and isomerase ; 3-hydroxyacyl-CoA dehydrogenase
yfcY,b2342,,,0.26,0.42,0.42,beta-ketoacyl-CoA thiolase - anaerobic - subunit
fadL,b2344,,,0.20,0.22,0.20,long-chain fatty acid outer membrane transporter
dsdX,b2365,,2.14,2.38,2.10,,predicted transporter
yfdY,b2377,2.20,2.69,2.33,2.04,,predicted inner membrane protein
ypdG,b2386,,,,2.26,,predicted enzyme IIC component of PTS
nupC,b2393,,0.41,0.45,,,nucleoside (except guanosine) transporter
yfeC,b2398,,3.45,3.56,3.80,3.44,predicted DNA-binding transcriptional regulator
cysM,b2421,,,,0.38,0.44,cysteine synthase B (O-acetylserine sulfhydrolase B)
cysA,b2422,,,,0.30,0.38,sulfate/thiosulfate transporter subunit ; ATP-binding component of ABC superfamily
cysW,b2423M,,,,0.22,0.31,abc-type sulfate transport system - permease component
cysU,b2424,,,0.23,0.25,0.21,sulfate/thiosulfate transporter subunit ; membrane component of ABC superfamily
cysP,b2425,,,0.26,0.34,0.27,thiosulfate transporter subunit ; periplasmic-binding component of ABC superfamily
ucpA,b2426,,2.98,3.22,2.58,3.05,predicted oxidoredutase - sulfate metabolism protein
yffS,b2450,,2.12,2.31,2.19,,CPZ-55 prophage; predicted protein
talA,b2464,,,0.46,0.24,0.21,transaldolase A
tktB,b2465,,,,0.37,0.23,transketolase 2 - thiamin-binding
bcp,b2480,0.42,,,,,thiol peroxidase - thioredoxin-dependent
purM,b2499,,0.18,0.20,0.19,0.22,phosphoribosylaminoimidazole synthetase
guaB,b2508,,0.49,0.48,0.39,,IMP dehydrogenase
ndk,b2518,0.20,0.11,0.08,0.12,0.15,multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase
pepB,b2523,,,,0.50,0.50,aminopeptidase B
iscU,b2529,,,,0.47,0.48,scaffold protein
iscS,b2530,,0.34,0.21,0.24,0.22,cysteine desulfurase (tRNA sulfurtransferase) - PLP-dependent
iscR,b2531,,0.11,0.13,0.12,0.13,DNA-binding transcriptional repressor
yfhQ,b2532,,2.02,2.45,2.05,2.12,predicted methyltransferase
csiE,b2535,,,0.43,0.42,0.33,stationary phase inducible protein
hcaR,b2537,,0.16,0.15,0.17,0.10,DNA-binding transcriptional activator of 3-phenylpropionic acid catabolism
yphA,b2543,,,0.31,0.29,0.24,predicted inner membrane protein
glyA,b2551,,0.33,0.47,0.49,0.49,serine hydroxymethyltransferase
yfiD,b2579,7.60,7.66,7.64,5.95,4.54,pyruvate formate lyase subunit
kgtP,b2587,,0.29,0.17,0.14,0.11,alpha-ketoglutarate transporter
clpB,b2592,,,,2.05,2.46,protein disaggregation chaperone
yfiA,b2597,,3.83,4.79,4.56,4.54,cold shock protein associated with 30S ribosomal subunit
ypjM,b2641,,,,2.80,3.37,CP4-57 prophage; predicted protein (pseudogene)
ygaQ,b2654,,2.02,2.02,,,predicted protein
ygaF,b2660,,,,0.28,0.16,predicted enzyme
gabD,b2661,,,,0.22,0.19,succinate-semialdehyde dehydrogenase I - NADP-dependent
gabT,b2662,,,,,0.27,4-aminobutyrate aminotransferase - PLP-dependent
ygaU,b2665,,,0.48,0.25,0.22,predicted protein
yqaE,b2666,,,,0.38,0.41,predicted membrane protein
ygaM,b2672,,,,,0.43,predicted protein
nrdH,b2673,,,0.37,0.20,0.25,glutaredoxin-like protein
nrdI,b2674,,,,0.25,0.19,protein that stimulates ribonucleotide reduction
proW,b2678,,,,0.40,,glycine betaine transporter subunit ; membrane component of ABC superfamily
luxS,b2687,,,0.46,0.41,0.34,S-ribosylhomocysteinase
ygaD,b2700,,,,2.02,,conserved protein
srlA,b2702,,,,2.08,2.36,glucitol/sorbitol-specific enzyme IIC component of PTS
srlR,b2707,,2.69,2.92,2.60,2.29,DNA-bindng transcriptional repressor
hypA,b2726,2.61,9.08,9.10,9.75,9.43,protein involved in nickel insertion into hydrogenases 3
hypB,b2727,,7.87,13.00,12.31,11.69,GTP hydrolase involved in nickel liganding into hydrogenases
hypC,b2728,,3.39,7.00,6.21,5.95,protein required for maturation of hydrogenases 1 and 3
hypD,b2729,,,4.03,3.48,3.56,protein required for maturation of hydrogenases
hypE,b2730,,,2.92,3.01,2.89,carbamoyl phosphate phosphatase - hydrogenase 3 maturation protein
rpoS,b2741,,,0.39,0.41,0.29,RNA polymerase - sigma S (sigma 38) factor
nlpD,b2742,,,0.42,0.41,0.37,predicted outer membrane lipoprotein
ygbE,b2749,,,0.24,0.22,0.15,conserved inner membrane protein
cysC,b2750,,,0.48,0.40,0.41,adenosine 5'-phosphosulfate kinase
cysN,b2751,,,0.26,0.28,0.25,sulfate adenylyltransferase - subunit 1
cysD,b2752,,,0.20,0.29,0.31,sulfate adenylyltransferase - subunit 2
cysI,b2763,,,0.23,0.11,0.16,sulfite reductase - beta subunit - NAD(P)-binding - heme-binding
cysJ,b2764,,,0.18,0.18,0.20,sulfite reductase - alpha subunit - flavoprotein
ygcN,b2766,,,2.75,,3.23,predicted oxidoreductase with FAD/NAD(P)-binding domain
fucA,b2800,,2.02,2.89,3.68,2.60,L-fuculose-1-phosphate aldolase
fucP,b2801,,,,,2.22,L-fucose transporter
yqeI,b2847,,,,3.31,,predicted transcriptional regulator
xdhA,b2866,,,2.53,2.17,2.46,xanthine dehydrogenase - molybdenum binding subunit
xdhB,b2867,,,2.16,2.53,2.44,xanthine dehydrogenase - FAD-binding subunit
ygeW,b2870,,2.97,5.89,7.19,7.68,conserved protein
ygeX,b2871,,,4.63,6.74,6.99,2 -3-diaminopropionate ammonia-lyase
ygeY,b2872,,,,5.38,5.85,predicted peptidase
yqeC,b2876,,5.90,8.16,7.00,6.24,conserved protein
ygfJ,b2877,,,,,2.60,conserved protein
ygfK,b2878,,,6.52,8.55,11.14,predicted oxidoreductase - Fe-S subunit
ssnA,b2879,,,3.13,3.36,4.91,predicted chlorohydrolase/aminohydrolase
ygfM,b2880,,,,5.94,7.10,predicted oxidoreductase
ygfO,b2882,,,,,2.40,predicted transporter
metK,b2942,,0.26,0.20,0.21,0.15,methionine adenosyltransferase 1
ansB,b2957,,,4.80,6.00,5.75,periplasmic L-asparaginase II
yqgA,b2966,,,,2.05,,predicted inner membrane protein
glcB,b2976,,,,0.35,0.38,malate synthase G
glcG,b2977,,,0.34,0.26,0.24,conserved protein
glcF,b2978,,,0.45,0.33,0.32,glycolate oxidase iron-sulfur subunit
glcC,b2980,,0.26,0.21,0.21,0.20,DNA-binding transcriptional dual regulator - glycolate-binding
hybE,b2992,,,,2.95,3.15,hydrogenase 2-specific chaperone
hybD,b2993,,,,,2.21,predicted maturation element for hydrogenase 2
hybC,b2994,,,2.16,2.48,3.20,hydrogenase 2 - large subunit
hybB,b2995,,,3.24,4.57,5.62,predicted hydrogenase 2 cytochrome b type component
hybA,b2996,,,2.45,2.94,3.12,hydrogenase 2 4Fe-4S ferredoxin-type component
hybO,b2997,,3.25,8.19,11.97,12.26,hydrogenase 2 - small subunit
exbD,b3005,,,,0.40,0.31,membrane spanning protein in TonB-ExbB-ExbD complex
exbB,b3006,,,,0.34,0.35,membrane spanning protein in TonB-ExbB-ExbD complex
b3007,b3007,,3.93,2.02,,,"FALSE ANNOTATION (Riley2005) - """"orf - hypothetical protein"""""
metC,b3008,,,,,0.47,cystathionine beta-lyase - PLP-dependent
yqhD,b3011,,,2.51,2.32,,alcohol dehydrogenase - NAD(P)-dependent
yqhH,b3014,,,,,2.01,predicted outer membrane lipoprotein
ribB,b3041,,2.15,2.73,2.89,2.99,3 -4-dihydroxy-2-butanone-4-phosphate synthase
yqiI,b3048,,,,2.13,,conserved protein
glgS,b3049,,,3.28,3.19,,predicted glycogen synthesis protein
yqiJ,b3050,,2.05,,2.16,,predicted inner membrane protein
rpsU,b3065,0.32,0.43,,,,30S ribosomal subunit protein S21
ygjG,b3073,,0.41,0.29,0.26,0.26,putrescine:2-oxoglutaric acid aminotransferase - PLP-dependent
ygjR,b3087,,2.13,,,,predicted NAD(P)-binding dehydrogenase
uxaC,b3092,,,2.07,,,uronate isomerase
yqjC,b3097,,,,0.45,0.48,conserved protein
yqjD,b3098,,,,0.46,0.34,conserved protein
yqjE,b3099,,,,,0.37,conserved inner membrane protein
yqjK,b3100,,,,0.45,0.38,conserved protein
yhaQ,b3112,,,,3.87,3.42,putative l-serine dehydratase
tdcF,b3113,,,3.01,5.79,5.07,predicted L-PSP (mRNA) endoribonuclease
tdcE,b3114,,,,,2.18,pyruvate formate-lyase 4/2-ketobutyrate formate-lyase
tdcD,b3115,,,5.09,6.14,5.31,propionate kinase/acetate kinase C - anaerobic
tdcC,b3116,,,2.70,2.72,2.68,L-threonine/L-serine transporter
tdcB,b3117,,,11.05,11.98,11.75,catabolic threonine dehydratase - PLP-dependent
tdcA,b3118,,,2.76,3.55,2.60,DNA-binding transcriptional activator
tdcR,b3119,,,2.76,2.79,3.37,DNA-binding transcriptional activator
garD,b3128,,,,2.02,2.52,(D)-galactarate dehydrogenase
yhbT,b3157,,2.78,3.04,2.54,,predicted lipid carrier protein
rpmA,b3185,0.47,0.48,,,,50S ribosomal subunit protein L27
gltB,b3212,,,0.39,0.39,0.38,glutamate synthase - large subunit
argR,b3237,,,2.49,2.42,2.49,DNA-binding transcriptional dual regulator - L-arginine-binding
yhcO,b3239,,,,0.33,0.37,predicted barnase inhibitor
rpmC,b3312,,,0.46,,,50S ribosomal subunit protein L29
rpsC,b3314,,,0.47,,,30S ribosomal subunit protein S3
rplV,b3315,,,0.42,,,50S ribosomal subunit protein L22
rplD,b3319,,0.48,,,,50S ribosomal subunit protein L4
bfr,b3336,,,,0.40,0.43,bacterioferritin - iron storage and detoxification protein
bfd,b3337,,,,0.31,0.29,bacterioferritin-associated ferredoxin
rpsG,b3341,,0.37,,,,30S ribosomal subunit protein S7
rpsL,b3342,,0.38,,,,30S ribosomal subunit protein S12
argD,b3359,,,2.49,2.01,2.09,bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase
yhfG,b3362,,,0.35,0.32,0.39,predicted protein
nirB,b3365,,5.44,4.53,3.30,2.67,nitrite reductase - large subunit - NAD(P)H-binding
pck,b3403,,,,2.15,,phosphoenolpyruvate carboxykinase
feoA,b3408,4.17,13.93,3.81,,,ferrous iron transporter - protein A
feoB,b3409,,8.44,6.12,,,fused ferrous iron transporter - protein B: GTP-binding protein ; membrane protein
yhgG,b3410,,8.25,7.00,,,predicted DNA-binding transcriptional regulator
glgP,b3428,,,,,2.30,glycogen phosphorylase
glgA,b3429,,,2.35,3.62,4.14,glycogen synthase
glgC,b3430,,,2.89,4.78,5.38,glucose-1-phosphate adenylyltransferase
glgX,b3431,,2.01,2.57,4.29,4.19,glycogen debranching enzyme
glgB,b3432,,,2.19,3.44,3.53,1 -4-alpha-glucan branching enzyme
asd,b3433,,,2.40,3.27,3.14,aspartate-semialdehyde dehydrogenase - NAD(P)-binding
ugpA,b3452,,0.31,,0.26,0.22,glycerol-3-phosphate transporter subunit ; membrane component of ABC superfamily
livJ,b3460,,,0.45,0.28,0.20,leucine/isoleucine/valine transporter subunit ; periplasmic-binding component of ABC superfamily
nikA,b3476,,,3.79,4.52,5.24,nickel transporter subunit ; periplasmic-binding component of ABC superfamily
nikD,b3479,,2.48,12.96,14.56,11.37,nickel transporter subunit ; ATP-binding component of ABC superfamily
nikE,b3480,,,6.17,5.86,6.14,nickel transporter subunit ; ATP-binding component of ABC superfamily
uspA,b3495,,,2.41,2.33,,universal stress global response regulator
gadX,b3516,,,0.48,0.43,0.48,DNA-binding transcriptional dual regulator
dctA,b3528,,0.46,0.16,0.16,0.21,C4-dicarboxylic acid - orotate and citrate transporter
bcsG,b3538,,,,0.45,,predicted inner membrane protein
dppD,b3541,,0.43,0.32,0.25,0.27,dipeptide transporter ; ATP-binding component of ABC superfamily
dppC,b3542,,0.40,0.37,0.34,0.36,dipeptide transporter ; membrane component of ABC superfamily
dppB,b3543,,0.47,0.47,0.38,0.38,dipeptide transporter; membrane component of ABC superfamily
dppA,b3544,,,,0.43,0.36,dipeptide transporter ; periplasmic-binding component of ABC superfamily
yiaG,b3555,,,0.48,0.32,0.32,predicted transcriptional regulator
cspA,b3556,2.60,2.60,6.70,7.11,10.82,major cold shock protein
yiaI,b3573,,2.19,3.48,2.90,3.06,predicted hydrogenase - 4Fe-4S ferredoxin-type component
aldB,b3588,,,0.21,0.28,0.20,aldehyde dehydrogenase B
selA,b3591,,2.22,3.01,2.35,2.37,selenocysteine synthase
lldP,b3603,,,,0.21,0.19,L-lactate permease
lldR,b3604,,,0.45,0.48,0.37,DNA-binding transcriptional repressor
lldD,b3605,,,0.40,0.28,0.26,L-lactate dehydrogenase - FMN-linked
cysE,b3607,,0.50,,,,serine acetyltransferase
yibN,b3611,,0.49,,,,predicted rhodanese-related sulfurtransferase
gpmI,b3612,,,2.13,,,phosphoglycero mutase III - cofactor-independent
mutM,b3635,,0.44,,,,formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase
rpmG,b3636,0.47,0.34,0.49,,,50S ribosomal subunit protein L33
dinD,b3645,,,2.07,2.48,,DNA-damage-inducible protein
nlpA,b3661,,,,,0.44,cytoplasmic membrane lipoprotein-28
ilvN,b3670,,0.43,0.23,0.26,0.24,acetolactate synthase I - small subunit
ilvB,b3671,,0.39,0.30,0.24,0.23,acetolactate synthase I - large subunit
yidB,b3698,,,0.45,,,conserved protein
rpmH,b3703,0.40,0.37,,,,50S ribosomal subunit protein L34
rnpA,b3704,0.38,0.39,,,,protein C5 component of RNase P
mdtL,b3710,,,,2.86,2.81,multidrug efflux system protein
yieG,b3714,,0.29,0.43,0.43,,predicted inner membrane protein
atpD,b3732,,,0.38,0.41,0.36,F1 sector of membrane-bound ATP synthase - beta subunit
atpA,b3734,,,,0.49,,F1 sector of membrane-bound ATP synthase - alpha subunit
yieN,b3746,,2.24,3.23,2.67,2.53,fused predicted transcriptional regulator: sigma54 activator protein ; conserved protein
ilvG,b3767M,,3.02,,,0.40,acetolactate synthase ii - large subunit
ilvM,b3769,,2.35,2.53,,,acetolactate synthase II - small subunit
ilvE,b3770,,,2.38,,,branched-chain amino-acid aminotransferase
ilvD,b3771,,,2.48,,,dihydroxyacid dehydratase
ilvC,b3774,,0.23,0.20,0.23,0.19,ketol-acid reductoisomerase - NAD(P)-binding
yifK,b3795,,,,0.37,0.43,predicted transporter
xerC,b3811,,0.48,,,,site-specific tyrosine recombinase
yigI,b3820,,0.28,0.20,0.16,,conserved protein
metR,b3828,,0.34,0.27,0.23,0.28,DNA-binding transcriptional activator - homocysteine-binding
metE,b3829,,,0.12,0.07,0.06,5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
tatB,b3838,0.45,,,,,TatABCE protein translocation system subunit
fadA,b3845,,0.48,0.26,0.27,0.25,3-ketoacyl-CoA thiolase (thiolase I)
fadB,b3846,,0.26,0.13,0.14,0.13,fused 3-hydroxybutyryl-CoA epimerase and delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase and enoyl-CoA hydratase ; 3-hydroxyacyl-CoA dehydrogenase
yihI,b3866,,0.47,0.36,0.42,0.47,conserved protein
rhaB,b3904,,,,2.23,3.17,rhamnulokinase
sodA,b3908,,,0.35,0.25,0.35,superoxide dismutase - Mn
yiiO,b3913M,,,,4.62,7.09,uncharacterized periplasmic protein
yiiT,b3923,,2.00,,,,stress-induced protein
glpX,b3925,,,,2.42,,fructose 1 -6-bisphosphatase II
rraA,b3929,,2.07,2.59,2.26,2.09,ribonuclease E (RNase E) inhibitor protein
metB,b3939,,,0.46,,,cystathionine gamma-synthase - PLP-dependent
gldA,b3945,,4.13,8.05,10.22,8.18,glycerol dehydrogenase - NAD
fsaB,b3946,,,2.12,2.07,2.38,fructose-6-phosphate aldolase 2
argC,b3958,,,2.28,,,N-acetyl-gamma-glutamylphosphate reductase - NAD(P)-binding
birA,b3973,,,,2.36,3.52,bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase and DNA-binding transcriptional repressor - bio-5'-AMP-binding
rplA,b3984,,0.41,,,,50S ribosomal subunit protein L1
thiH,b3990,,,,0.34,0.33,thiamin biosynthesis ThiGH complex subunit
thiG,b3991,,,,0.39,0.30,thiamin biosynthesis ThiGH complex subunit
thiF,b3992,,,,0.33,0.40,thiamin (thiazole moiety) biosynthesis protein
thiE,b3993,,0.44,0.40,0.34,0.31,thiamin phosphate synthase (thiamin phosphate pyrophosphorylase)
thiC,b3994,,0.46,0.45,0.35,0.27,thiamin (pyrimidine moiety) biosynthesis protein
rsd,b3995,,0.49,0.42,0.33,0.45,stationary phase protein - binds sigma 70 RNA polymerase subunit
yjaH,b4001,,,2.12,2.51,2.31,conserved protein
zraP,b4002,,,,7.64,11.38,Zn-binding periplasmic protein
metA,b4013,,0.47,0.29,0.34,0.28,homoserine transsuccinylase
aceA,b4015,,,0.29,0.16,0.16,isocitrate lyase
aceK,b4016,,,0.35,0.23,0.29,isocitrate dehydrogenase kinase/phosphatase
yjbD,b4023,,,,,2.03,conserved protein
lysC,b4024,,,,2.45,2.42,aspartokinase III
malG,b4032,,,2.19,3.75,5.05,maltose transporter subunit ; membrane component of ABC superfamily
malF,b4033,,2.35,2.89,4.67,5.48,maltose transporter subunit ; membrane component of ABC superfamily
malE,b4034,,,,2.44,2.77,maltose transporter subunit ; periplasmic-binding component of ABC superfamily
malK,b4035,,,,2.03,2.53,fused maltose transport subunit - ATP-binding component of ABC superfamily ; regulatory protein
lamB,b4036,,,,,2.49,maltose outer membrane porin (maltoporin)
malM,b4037,,,,2.64,3.59,maltose regulon periplasmic protein
ubiC,b4039,,0.37,0.36,0.38,0.36,chorismate pyruvate lyase
zur,b4046,,2.06,2.32,2.13,,DNA-binding transcriptional repressor - Zn(II)-binding
yjbO,b4050,,,2.23,2.49,2.28,phage shock protein G
tyrB,b4054,,0.46,,0.45,0.35,tyrosine aminotransferase - tyrosine-repressible - PLP-dependent
yjcB,b4060,,,,2.18,2.76,predicted inner membrane protein
actP,b4067,,,0.14,0.07,0.05,acetate transporter
yjcH,b4068,,,0.10,0.03,0.02,conserved inner membrane protein involved in acetate transport
acs,b4069,,,0.15,0.07,0.06,acetyl-CoA synthetase
fdhF,b4079,,,,2.47,2.18,formate dehydrogenase-H - selenopolypeptide subunit
phnK,b4097,,,2.90,3.25,4.14,carbon-phosphorus lyase complex subunit
fumB,b4122,,,,2.38,3.93,anaerobic class I fumarate hydratase (fumarase B)
dcuB,b4123,,,,2.28,3.75,C4-dicarboxylate antiporter
yjdC,b4135,,0.34,0.46,0.42,0.45,predicted transcriptional regulator
dcuA,b4138,,,3.28,4.79,3.72,C4-dicarboxylate antiporter
aspA,b4139,,2.24,3.18,3.20,3.00,aspartate ammonia-lyase
blc,b4149,,,0.37,0.34,0.33,outer membrane lipoprotein (lipocalin)
frdD,b4151,,,3.41,3.28,4.48,fumarate reductase (anaerobic) - membrane anchor subunit
frdC,b4152,,2.35,4.22,4.18,4.74,fumarate reductase (anaerobic) - membrane anchor subunit
frdB,b4153,,2.75,5.10,5.59,5.80,fumarate reductase (anaerobic) - Fe-S subunit
frdA,b4154,,2.02,2.50,3.25,3.23,fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit
mutL,b4170,,,,2.69,5.96,methyl-directed mismatch repair protein
hflK,b4174,,,0.48,0.46,,modulator for HflB protease specific for phage lambda cII repressor
yjfN,b4188,2.33,,,,,predicted protein
yjfO,b4189,2.80,,,,,conserved protein
ulaA,b4193,,,,2.03,,L-ascorbate-specific enzyme IIC component of PTS
rplI,b4203,,0.48,,,,50S ribosomal subunit protein L9
cycA,b4208,,0.37,0.30,0.27,0.31,D-alanine/D-serine/glycine transporter
cpdB,b4213,,,,,0.49,2':3'-cyclic-nucleotide 2'-phosphodiesterase
ytfJ,b4216,,,0.41,0.32,0.36,predicted transcriptional regulator
ytfK,b4217,,,,,0.47,conserved protein
ytfQ,b4227,,,0.27,0.24,0.21,predicted sugar transporter subunit:  periplasmic-binding component of ABC superfamily
ytfR,b4228,,,0.44,0.32,0.35,putative atp-binding component of a transport system
treB,b4240,,,2.06,3.12,4.28,fused trehalose(maltose)-specific PTS enzyme:  IIB component ; IIC component
pyrI,b4244,,0.39,0.11,0.09,0.06,aspartate carbamoyltransferase - regulatory subunit
pyrB,b4245,,0.45,0.14,0.07,0.05,aspartate carbamoyltransferase - catalytic subunit
argI,b4254,,0.48,2.67,,,ornithine carbamoyltransferase 1
insN,b4283,,,0.30,0.25,0.24,KpLE2 phage-like element; partial regulator of insertion element IS911B. Interrupted by insertion of IS30 element.
sgcE,b4301,,,0.49,0.37,0.41,KpLE2 phage-like element; predicted epimerase
sgcA,b4302,,,0.48,0.28,0.41,KpLE2 phage-like element; predicted phosphotransferase enzyme IIA component
sgcQ,b4303,,,0.42,0.26,0.18,KpLE2 phage-like element; predicted nucleoside triphosphatase
sgcC,b4304,,,,0.32,0.23,KpLE2 phage-like element; predicted phosphotransferase enzyme IIC component
sgcX,b4305,,,,0.30,0.24,KpLE2 phage-like element; predicted endoglucanase with Zn-dependent exopeptidase domain
fimE,b4313,,,,,2.81,tyrosine recombinase/inversion of on/off regulator of fimA
yjiL,b4334,,,4.35,4.67,5.31,predicted ATPase - activator of (R)-hydroxyglutaryl-CoA dehydratase
yjiM,b4335,,,6.76,9.70,9.38,predicted 2-hydroxyglutaryl-CoA dehydratase
hsdR,b4350,,,,,2.07,endonuclease R
prfC,b4375,,0.46,,,,peptide chain release factor RF-3
osmY,b4376,,,0.35,0.26,0.29,periplasmic protein
yjjW,b4379,,,,,2.52,predicted pyruvate formate lyase activating enzyme
yjjI,b4380,,5.80,12.77,10.13,8.04,conserved protein
deoC,b4381,,2.03,,,,2-deoxyribose-5-phosphate aldolase - NAD(P)-linked
deoA,b4382,,,,0.43,0.39,thymidine phosphorylase
arcA,b4401,,0.39,0.26,0.26,0.26,DNA-binding response regulator in two-component regulatory system with ArcB or CpxA