output/quast/Enterobacter/report.tsv
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_p_RNAinVAL/_I_03_Omics/_S_02_metagenome_resp/_A_06_extr_bact-assembly/

SEEK ID: https://fairdomhub.org/data_files/4776?version=1

Filename: output/quast/Enterobacter/report.tsv

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Assembly	spades
# contigs (>= 0 bp)	15269
# contigs (>= 1000 bp)	2357
# contigs (>= 5000 bp)	21
# contigs (>= 10000 bp)	0
# contigs (>= 25000 bp)	0
# contigs (>= 50000 bp)	0
Total length (>= 0 bp)	9480477
Total length (>= 1000 bp)	3815843
Total length (>= 5000 bp)	133432
Total length (>= 10000 bp)	0
Total length (>= 25000 bp)	0
Total length (>= 50000 bp)	0
# contigs	15134
Largest contig	9825
Total length	9459172
GC (%)	56.06
N50	801
N75	452
L50	3376
L75	7317
# total reads	68205781
# left	34082806
# right	34082806
Mapped (%)	99.49
Properly paired (%)	80.31
Avg. coverage depth	1067
Coverage >= 1x (%)	99.98
# N's per 100 kbp	0.00
Complete BUSCO (%)	54.73
Partial BUSCO (%)	16.22
# predicted genes (unique)	11813
# predicted genes (>= 0 bp)	8618 + 3198 part
# predicted genes (>= 300 bp)	6085 + 2406 part
# predicted genes (>= 1500 bp)	118 + 28 part
# predicted genes (>= 3000 bp)	7 + 0 part
# predicted rRNA genes	11 + 3 part

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