Master file, aggregates metabolite concentrations inside and outside the cell, protein copy number and flux estimates for metabolites in the core model. Based on all internal metabolite concentrations, external metabolite concentrations from growth curve data, flux of glucose, lactate and acetate based on growth curve data and protein copy number data for enzyme concentrations. Combines absolute and relative measurements and metabolomics measurements from different experiment to get an as complete ...
Creator: Niels Zondervan
Submitter: Niels Zondervan
Investigations: Modelling of M. pneumoniae metabolism
Studies: Core Model training, Metabolomics measurements, Proteomics analysis
Assays: Construction and training of the core model, Metabolomics external metabolites measurements, Metabolomics internal metabolites, time series ..., Proteomics assay