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11 Data files visible to you, out of a total of 11

FPKM value of breast cancer patient

Consensus Hallmark Annotation

1222 patients

Creator: Yi Chen

Submitter: Yi Chen

Investigations: Cancer Hallmark Consensus

Studies: Prognostic and Hallmark Gene Networks

Assays: WGCNA Prognostic Hallmark Genes

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Created: 5th Mar 2021 at 17:57, Last updated: 5th Mar 2021 at 17:57

prognostic genes of 17 cancer types

Consensus Hallmark Annotation

No description specified

Creator: Yi Chen

Submitter: Yi Chen

Investigations: Cancer Hallmark Consensus

Studies: Prognostic and Hallmark Gene Networks

Assays: Jaccard Index Prognostic Hallmark Genes

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Created: 5th Mar 2021 at 10:05, Last updated: 5th Mar 2021 at 10:05

Gene enrichment analysis output of modules

Consensus Hallmark Annotation

For each module, GSEA analysis was conducted by using web-tool g:profiler and only biological process (BP) were retained. Parameters for GSEA are default.

Creator: Yi Chen

Submitter: Yi Chen

Investigations: Cancer Hallmark Consensus

Studies: Prognostic and Hallmark Gene Networks

Assays: Hub genes of modules and enriched GO terms

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Created: 7th Feb 2021 at 23:42, Last updated: 9th Feb 2021 at 10:42

Consensus Hallmark Annotation

Calculated by using R package GOSemSim.

Creator: Yi Chen

Submitter: Yi Chen

Investigations: Cancer Hallmark Consensus

Studies: Prognostic and Hallmark Gene Networks

Assays: Hub genes of modules and enriched GO terms

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Created: 7th Feb 2021 at 23:53, Last updated: 9th Feb 2021 at 10:42

Modules and hub genes

Consensus Hallmark Annotation

Modules were identified by WGCNA. hub genes of each modules were identified based on intramodular degree.

Creator: Yi Chen

Submitter: Yi Chen

Investigations: Cancer Hallmark Consensus

Studies: Prognostic and Hallmark Gene Networks

Assays: Hub genes of modules and enriched GO terms

Download

Created: 7th Feb 2021 at 23:37, Last updated: 9th Feb 2021 at 10:42

Abbreviations of 17 cancer types

Consensus Hallmark Annotation

No description specified

Creator: Yi Chen

Submitter: Yi Chen

Investigations: Cancer Hallmark Consensus

Studies: Prognostic and Hallmark Gene Networks

Assays: Jaccard Index Prognostic Hallmark Genes

Download

Created: 7th Feb 2021 at 23:48, Last updated: 9th Feb 2021 at 10:42

Jaccard index score

Consensus Hallmark Annotation

No description specified

Creator: Yi Chen

Submitter: Yi Chen

Investigations: Cancer Hallmark Consensus

Studies: Prognostic and Hallmark Gene Networks

Assays: Jaccard Index Prognostic Hallmark Genes

Download

Created: 3rd Feb 2021 at 18:39, Last updated: 9th Feb 2021 at 10:40

Prognostic-hallmark genes of GO4 with log transformed FPKM value

Consensus Hallmark Annotation

Including 91 genes and 1222 Breast cancer patient This is an input data for WGCNA

Creator: Yi Chen

Submitter: Yi Chen

Investigations: Cancer Hallmark Consensus

Studies: Prognostic and Hallmark Gene Networks

Assays: WGCNA Prognostic Hallmark Genes

Download

Created: 3rd Feb 2021 at 15:54, Last updated: 9th Feb 2021 at 10:40

Prognostic-hallmark genes of GO3 with log transformed FPKM value

Consensus Hallmark Annotation

Including 289 genes and 1222 Breast cancer patient This is an input data for WGCNA

Creator: Yi Chen

Submitter: Yi Chen

Investigations: Cancer Hallmark Consensus

Studies: Prognostic and Hallmark Gene Networks

Assays: WGCNA Prognostic Hallmark Genes

Download

Created: 3rd Feb 2021 at 15:52, Last updated: 9th Feb 2021 at 10:38

Prognostic-hallmark genes of GO2 with log transformed FPKM value

Consensus Hallmark Annotation

Including 277 genes and 1222 Breast cancer patients. This is an input data for WGCNA.

Creator: Yi Chen

Submitter: Yi Chen

Investigations: Cancer Hallmark Consensus

Studies: Prognostic and Hallmark Gene Networks

Assays: WGCNA Prognostic Hallmark Genes

Download

Created: 3rd Feb 2021 at 15:51, Last updated: 9th Feb 2021 at 10:37

Prognostic-hallmark genes of GO1 with log transformed FPKM value

Consensus Hallmark Annotation

Including 294 genes and 1222 Breast cancer Patient. This is an input data for WGCNA

Creator: Yi Chen

Submitter: Yi Chen

Investigations: Cancer Hallmark Consensus

Studies: Prognostic and Hallmark Gene Networks

Assays: WGCNA Prognostic Hallmark Genes

Download

Created: 3rd Feb 2021 at 15:49, Last updated: 9th Feb 2021 at 10:37

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