Assays

CITE-seq analysis processes multimodal single-cell data combining RNA sequencing and antibody-derived tags. It integrates transcriptomic and surface protein profiles to classify cell types and states. Input: Raw CITE-seq data Output: Processed expression matrices and integrated cell-type annotations.

Short read sequencing is a high-throughput next-generation sequencing (NGS) approach used to determine the nucleotide sequence of DNA or RNA fragments, enabling detection of genetic variants, gene expression profiles, or genomic features depending on the library preparation strategy employed. This assay involves fragmentation of input nucleic acids, adapter ligation, and amplification prior to sequencing on short-read platforms (such as Illumina), generating millions of short sequence reads ...