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SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_01_assembly2-rnaSPAdes/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_01_assembly2-rnaSPAdes

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Created: 16th May 2022 at 11:58, Last updated: 6th Nov 2024 at 15:27

reports/spades.log

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_01_assembly2-rnaSPAdes/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_01_assembly2-rnaSPAdes

Download

Created: 16th May 2022 at 11:58, Last updated: 6th Nov 2024 at 15:27

reports/spades_errorcor.log

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_01_assembly2-rnaSPAdes/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_01_assembly2-rnaSPAdes

Download

Created: 16th May 2022 at 11:58, Last updated: 6th Nov 2024 at 15:27

other/log10rawcounts_boxplot.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_09_As1_tr_limmaDE-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_09_As1_tr_limmaDE-R

Download

Created: 16th May 2022 at 11:50, Last updated: 6th Nov 2024 at 15:27

other/norm_cf_lcpm_MDS.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_09_As1_tr_limmaDE-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_09_As1_tr_limmaDE-R

Download

Created: 16th May 2022 at 11:50, Last updated: 6th Nov 2024 at 15:27

other/norm_counts_filtered_MDS.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_09_As1_tr_limmaDE-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_09_As1_tr_limmaDE-R

Download

Created: 16th May 2022 at 11:51, Last updated: 6th Nov 2024 at 15:27

other/norm_counts_raw&filtered_densityplots.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_09_As1_tr_limmaDE-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_09_As1_tr_limmaDE-R

Download

Created: 16th May 2022 at 11:51, Last updated: 6th Nov 2024 at 15:27

other/PCA_biplot.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_09_As1_tr_limmaDE-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_09_As1_tr_limmaDE-R

Download

Created: 16th May 2022 at 11:51, Last updated: 6th Nov 2024 at 15:27

other/SIGMA_vs_A_plot.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_09_As1_tr_limmaDE-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_09_As1_tr_limmaDE-R

Download

Created: 16th May 2022 at 11:51, Last updated: 6th Nov 2024 at 15:27

other/voom_mean-variance_trend.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_09_As1_tr_limmaDE-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_09_As1_tr_limmaDE-R

Download

Created: 16th May 2022 at 11:51, Last updated: 6th Nov 2024 at 15:27

scripts/mapToAssembly1_DE_limma-voom.R

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_09_As1_tr_limmaDE-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_09_As1_tr_limmaDE-R

Download

Created: 16th May 2022 at 11:51, Last updated: 6th Nov 2024 at 15:27

output/Pcitri_mapToAssembly_STAR_MF09.counts

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_08_mapReadsToAs1-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_08_mapReadsToAs1-STAR

Download

Created: 16th May 2022 at 11:50, Last updated: 6th Nov 2024 at 15:27

output/Pcitri_mapToAssembly_STAR_MF10.counts

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_08_mapReadsToAs1-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_08_mapReadsToAs1-STAR

Download

Created: 16th May 2022 at 11:50, Last updated: 6th Nov 2024 at 15:27

output/Pcitri_mapToAssembly_STAR_MF11.counts

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_08_mapReadsToAs1-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_08_mapReadsToAs1-STAR

Download

Created: 16th May 2022 at 11:50, Last updated: 6th Nov 2024 at 15:27

output/Pcitri_mapToAssembly_STAR_VF02.counts

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_08_mapReadsToAs1-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_08_mapReadsToAs1-STAR

Download

Created: 16th May 2022 at 11:50, Last updated: 6th Nov 2024 at 15:27

output/Pcitri_mapToAssembly_STAR_VF03.counts

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_08_mapReadsToAs1-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_08_mapReadsToAs1-STAR

Download

Created: 16th May 2022 at 11:50, Last updated: 6th Nov 2024 at 15:27

output/Pcitri_mapToAssembly_STAR_VF05.counts

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_08_mapReadsToAs1-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_08_mapReadsToAs1-STAR

Download

Created: 16th May 2022 at 11:50, Last updated: 6th Nov 2024 at 15:27

output/Pcitri_mapToAssembly_STAR_VF06.counts

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_08_mapReadsToAs1-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_08_mapReadsToAs1-STAR

Download

Created: 16th May 2022 at 11:50, Last updated: 6th Nov 2024 at 15:27

other/density_plot_before_lowexpr_filter.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_09_As1_tr_limmaDE-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_09_As1_tr_limmaDE-R

Download

Created: 16th May 2022 at 11:50, Last updated: 6th Nov 2024 at 15:27

other/log10filteredcounts_boxplot.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_09_As1_tr_limmaDE-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_09_As1_tr_limmaDE-R

Download

Created: 16th May 2022 at 11:50, Last updated: 6th Nov 2024 at 15:27

output/PcSpadesTRtoGenome_STARlong_Unmapped.out.mate1.zip

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_07_mapAs1ToGenome-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_07_mapAs1ToGenome-STAR

Download

Created: 16th May 2022 at 11:49, Last updated: 6th Nov 2024 at 15:27

reports/PcSpadesTRsofttoGenome_STARlong_Log.final.out

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_07_mapAs1ToGenome-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_07_mapAs1ToGenome-STAR

Download

Created: 16th May 2022 at 11:49, Last updated: 6th Nov 2024 at 15:27

reports/PcSpadesTRsofttoGenome_STARlong_Log.out

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_07_mapAs1ToGenome-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_07_mapAs1ToGenome-STAR

Download

Created: 16th May 2022 at 11:49, Last updated: 6th Nov 2024 at 15:27

reports/PcSpadesTRsofttoGenome_STARlong_Log.progress.out

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_07_mapAs1ToGenome-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_07_mapAs1ToGenome-STAR

Download

Created: 16th May 2022 at 11:49, Last updated: 6th Nov 2024 at 15:27

reports/PcSpadesTRtoGenome_STARlong_Log.final.out

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_07_mapAs1ToGenome-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_07_mapAs1ToGenome-STAR

Download

Created: 16th May 2022 at 11:49, Last updated: 6th Nov 2024 at 15:27

reports/PcSpadesTRtoGenome_STARlong_Log.out

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_07_mapAs1ToGenome-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_07_mapAs1ToGenome-STAR

Download

Created: 16th May 2022 at 11:49, Last updated: 6th Nov 2024 at 15:27

reports/PcSpadesTRtoGenome_STARlong_Log.progress.out

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_07_mapAs1ToGenome-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_07_mapAs1ToGenome-STAR

Download

Created: 16th May 2022 at 11:49, Last updated: 6th Nov 2024 at 15:27

output/Pcitri_mapToAssembly_STAR_MF08.counts

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_08_mapReadsToAs1-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_08_mapReadsToAs1-STAR

Download

Created: 16th May 2022 at 11:50, Last updated: 6th Nov 2024 at 15:27

output/transcripts.fasta.zip

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_05_assembly1-rnaSPAdes/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_05_assembly1-rnaSPAdes

Download

Created: 16th May 2022 at 11:48, Last updated: 6th Nov 2024 at 15:27

input/soft_filtered_transcripts.pep.filtered.zip

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1/_A_06_assembly1-IPS/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1

Assays: _A_06_assembly1-IPS

Download

Created: 16th May 2022 at 11:48, Last updated: 6th Nov 2024 at 15:27

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