Web page: https://superfund.mit.edu/
Funding details:Related items
- People (1)
- Projects (1)
- Institutions (1)
- Investigations (1)
- Studies (1)
- Assays (7)
- Data files (12)
- SOPs (7)
- Publications (1)
- Samples (1158)
Institutions: Massachusetts Institute of Technology
Researcher at BioMIcro Center, Data Management and Analysis Core; Massachusetts Institute of Technology
Programme: MIT Superfund Research
Public web page: Not specified
Organisms: Not specified
Submitter: Dikshant Pradhan
Studies: Excision of mutagenic replication-blocking lesions suppresses cancer but...
Assays: GPT Assay – Data Attached, Mass Spectrometry Processing – Data Linked, Mass Spectrometry – Data Linked, Mouse Necropsy – Metadata, RaDR Image Machine Learning Analysis – Data Attached, Tissue Imaging – Metadata, Tissue Lysis – Metadata
Snapshots: No snapshots
Jennifer E. Kay, Joshua J. Corrigan, Amanda L. Armijo, Ilana S. Nazari, Ishwar N. Kohale, Dorothea K. Torous, Svetlana L. Avlasevich, Robert G. Croy, Dushan N. Wadduwage, Sebastian E. Carrasco, Stephen D. Dertinger, Forest M. White, John M. Essigmann, Leona D. Samson, Bevin P. Engelward doi: https://doi.org/10.1101/2021.01.12.426356
Submitter: Dikshant Pradhan
Investigation: MIT SRP
Assays: GPT Assay – Data Attached, Mass Spectrometry Processing – Data Linked, Mass Spectrometry – Data Linked, Mouse Necropsy – Metadata, RaDR Image Machine Learning Analysis – Data Attached, Tissue Imaging – Metadata, Tissue Lysis – Metadata
Snapshots: Snapshot 1, Snapshot 2, Snapshot 3, Snapshot 4
Submitter: Dikshant Pradhan
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: MIT SRP
Organisms: No organisms
SOPs: P.ENG-200806-V2_Short-Term-Collection-at-Necrop..., P.ENG-201008-V1_Med-Term-Collection-at-Necropsy...
Data files: samples-publish2021-03-30_16-25.xlsx, samples-publish2021-03-30_17-38.xlsx, samples-publish2021-09-20_22-36.xlsx
Snapshots: No snapshots
Submitter: Dikshant Pradhan
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: MIT SRP
Organisms: No organisms
SOPs: No SOPs
Data files: samples-publish2021-03-30_16-04.xlsx
Snapshots: No snapshots
Submitter: Dikshant Pradhan
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: MIT SRP
Organisms: No organisms
SOPs: No SOPs
Data files: samples-publish2021-03-30_15-51.xlsx, samples-publish2021-03-30_17-07.xlsx
Snapshots: No snapshots
Submitter: Dikshant Pradhan
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: MIT SRP
Organisms: No organisms
SOPs: No SOPs
Data files: samples-publish2021-03-30_14-31.xlsx, samples-publish2021-03-30_15-51.xlsx
Snapshots: No snapshots
Submitter: Dikshant Pradhan
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: MIT SRP
Organisms: No organisms
SOPs: No SOPs
Data files: samples-publish2021-03-30_17-07.xlsx
Snapshots: No snapshots
Submitter: Dikshant Pradhan
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: MIT SRP
Organisms: No organisms
SOPs: P.ESS-201123-V1_gpt-NextGen-Protocol.pdf
Data files: 10.1016.j.celrep.2021.108864_GPT_assay, D.GPT-samples-publish2021-12-13_23-22.xlsx
Snapshots: No snapshots
Submitter: Dikshant Pradhan
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: MIT SRP
Organisms: No organisms
SOPs: No SOPs
Data files: A.IMG-samples-publish2021-12-13_22-22.xlsx, WAD_RaDR_roi_extraction_10.1016.j.celrep.2021.1..., samples-publish2021-03-30_16-04.xlsx
Snapshots: No snapshots
Batch sample publishing
Creator: Dikshant Pradhan
Submitter: Dikshant Pradhan
Investigations: MIT SRP
Studies: Excision of mutagenic replication-blocking lesi...
Assays: GPT Assay – Data Attached
Creator: Dikshant Pradhan
Submitter: Dikshant Pradhan
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Batch sample publishing
Creator: Dikshant Pradhan
Submitter: Dikshant Pradhan
Investigations: MIT SRP
Creator: Dikshant Pradhan
Submitter: Dikshant Pradhan
Investigations: MIT SRP
Batch sample publishing
Creator: Dikshant Pradhan
Submitter: Dikshant Pradhan
Investigations: MIT SRP
Studies: Excision of mutagenic replication-blocking lesi...
Assays: Mouse Necropsy – Metadata
GPT Assay results for "Excision of mutagenic replication-blocking lesions suppresses cancer but promotes cytotoxicity and lethality in nitrosamine-exposed mice" by Kay et al. https://doi.org/10.1016/j.celrep.2021.108864
Creator: Dikshant Pradhan
Submitter: Dikshant Pradhan
Investigations: MIT SRP
Studies: Excision of mutagenic replication-blocking lesi...
Assays: GPT Assay – Data Attached
Batch sample publishing
Creator: Dikshant Pradhan
Submitter: Dikshant Pradhan
Investigations: MIT SRP
Studies: Excision of mutagenic replication-blocking lesi...
Assays: Mouse Necropsy – Metadata
Batch sample publishing
Creator: Dikshant Pradhan
Submitter: Dikshant Pradhan
Investigations: MIT SRP
Studies: Excision of mutagenic replication-blocking lesi...
Assays: Mouse Necropsy – Metadata
Batch sample publishing
Creator: Dikshant Pradhan
Submitter: Dikshant Pradhan
Investigations: MIT SRP
Studies: Excision of mutagenic replication-blocking lesi...
Assays: Mass Spectrometry – Data Linked, Tissue Lysis – Metadata
Batch sample publishing
Creator: Dikshant Pradhan
Submitter: Dikshant Pradhan
Investigations: MIT SRP
Studies: Excision of mutagenic replication-blocking lesi...
Assays: RaDR Image Machine Learning Analysis – Data Att..., Tissue Imaging – Metadata
Batch sample publishing
Creator: Dikshant Pradhan
Submitter: Dikshant Pradhan
Investigations: MIT SRP
Studies: Excision of mutagenic replication-blocking lesi...
Assays: Mass Spectrometry Processing – Data Linked, Mass Spectrometry – Data Linked
Batch sample publishing
Creator: Dikshant Pradhan
Submitter: Dikshant Pradhan
Investigations: MIT SRP
Creator: Dikshant Pradhan
Submitter: Dikshant Pradhan
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Next-Gen GPT Assay Protocol
Creator: Dikshant Pradhan
Submitter: Dikshant Pradhan
Investigations: MIT SRP
Studies: Excision of mutagenic replication-blocking lesi...
Assays: GPT Assay – Data Attached
Collection of Tissues at Necropsy of Short-Term Animals
Creator: Dikshant Pradhan
Submitter: Dikshant Pradhan
Investigations: MIT SRP
Studies: Excision of mutagenic replication-blocking lesi...
Assays: Mouse Necropsy – Metadata
Medium-Term Tissue Collection at Necropsy
Creator: Dikshant Pradhan
Submitter: Dikshant Pradhan
Investigations: MIT SRP
Studies: Excision of mutagenic replication-blocking lesi...
Assays: Mouse Necropsy – Metadata
Creator: Dikshant Pradhan
Submitter: Dikshant Pradhan
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Creator: Dikshant Pradhan
Submitter: Dikshant Pradhan
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Creator: Dikshant Pradhan
Submitter: Dikshant Pradhan
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Abstract
Authors: Jennifer E. Kay, Joshua J. Corrigan, Amanda L. Armijo, Ilana S. Nazari, Ishwar N. Kohale, Dorothea K. Torous, Svetlana L. Avlasevich, Robert G. Croy, Dushan N. Wadduwage, Sebastian E. Carrasco, Stephen D. Dertinger, Forest M. White, John M. Essigmann, Leona D. Samson, Bevin P. Engelward
Date Published: 1st Mar 2021
Publication Type: Journal
DOI: 10.1016/j.celrep.2021.108864
Citation: Cell Reports 34(11):108864