Investigations

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2 Investigations visible to you, out of a total of 2

Salmonella enterica relies on carbon metabolism for adaptation to agricultural environments

Adaptation of Salmonella enterica

No description specified

Submitter: Meina Neumann-Schaal

Studies: Metabolic analysis of Salmonella enterica to study carbon metabolism ada...

Assays: GC-MS based analysis of metabolites

Snapshots: Snapshot 1

DOI: 10.15490/fairdomhub.1.investigation.602.1

Created: 21st Mar 2023 at 06:59, Last updated: 28th Aug 2023 at 13:57

Systems biology investigation of aromatic compound catabolism in facultative anaerobic Aromatoleum aromaticum EbN1T

EbN1 Systems Biology

Members of the genus Aromatoleum are cosmopolitan in diverse habitats and utilize a broad range of recalcitrant organic molecules coupled to denitrification or O2-respiration. To gain a holistic understanding of the model organism A. aromaticum EbN1T, we here studied its catabolic network dynamics in response to 3-(4-hydroxyphenyl)propanoate, phenylalanine, 3-hydroxybenzoate, benzoate and acetate utilized under nitrate-reducing vs. oxic conditions. Multi-OMICS (transcriptome, proteome and metabolome) ...

Submitter: Meina Neumann-Schaal

Studies: Experimental multi-OMICS, Genome re-annotation, Metabolic Modelling

Assays: CoA LC/MS Data, Cultivation for multi-OMICS, EbN1 Genome re-annotation, Metabolic modeling of EbN1, Proteomic data, Scenario files for Metano metabolic modeling, Transcriptomic data, non-volatile metabolites GC/MS

Snapshots: Snapshot 1

DOI: 10.15490/fairdomhub.1.investigation.534.1

Created: 20th Apr 2022 at 11:57, Last updated: 2nd May 2022 at 07:25

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