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1269 Data files visible to you, out of a total of 1271

phenodata_Luciferase_20211222.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T11_dCas9SynProm/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T11_dCas9SynProm

Studies: Investigation files

Assays: _I_T11_dCas9SynProm-files

Download

Created: 10th Jan 2022 at 10:14, Last updated: 7th Nov 2024 at 10:01

_STUDY_METADATA.TXT

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T11_dCas9SynProm/_S_P1_SynProm_Nbenthamiana/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T11_dCas9SynProm

Studies: _S_P1_SynProm_Nbenthamiana

Assays: _S_P1_SynProm_Nbenthamiana-files

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Created: 10th Jan 2022 at 10:14, Last updated: 7th Nov 2024 at 10:01

_ASSAY_METADATA.TXT

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T11_dCas9SynProm/_S_P1_SynProm_Nbenthamiana/_A_20190208-LUM/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T11_dCas9SynProm

Studies: _S_P1_SynProm_Nbenthamiana

Assays: _A_20190208-LUM

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Created: 10th Jan 2022 at 10:14, Last updated: 7th Nov 2024 at 10:01

output/Luciferase Synt.prom. 08-02-2019.xlsx

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T11_dCas9SynProm/_S_P1_SynProm_Nbenthamiana/_A_20190208-LUM/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T11_dCas9SynProm

Studies: _S_P1_SynProm_Nbenthamiana

Assays: _A_20190208-LUM

Download

Created: 10th Jan 2022 at 10:16, Last updated: 7th Nov 2024 at 10:01

reports/Graphs.xlsx

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T11_dCas9SynProm/_S_P1_SynProm_Nbenthamiana/_A_20190208-LUM/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T11_dCas9SynProm

Studies: _S_P1_SynProm_Nbenthamiana

Assays: _A_20190208-LUM

Download

Created: 10th Jan 2022 at 10:16, Last updated: 7th Nov 2024 at 10:01

_INVESTIGATION_METADATA.TXT

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T11_dCas9SynProm/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T11_dCas9SynProm

Studies: Investigation files

Assays: _I_T11_dCas9SynProm-files

Download

Created: 10th Jan 2022 at 10:14, Last updated: 7th Nov 2024 at 10:01

output/Pcitri_tr2_counts_STAR_bothStr.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_05_As2_tr_limmaDE-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_05_As2_tr_limmaDE-R

Download

Created: 16th May 2022 at 12:07, Last updated: 6th Nov 2024 at 15:26

output/P_citri_alldata_RNAseq_logFC_padj_TMMcpm.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_05_As2_tr_limmaDE-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_05_As2_tr_limmaDE-R

Download

Created: 16th May 2022 at 12:06, Last updated: 6th Nov 2024 at 15:26

output/P_citri_alldata_RNAseq_logFC_padj_TMMcpm_2.xlsx

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_05_As2_tr_limmaDE-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_05_As2_tr_limmaDE-R

Download

Created: 16th May 2022 at 12:06, Last updated: 6th Nov 2024 at 15:26

output/P_citri_alldata_RNAseq_TMMcpms.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_05_As2_tr_limmaDE-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_05_As2_tr_limmaDE-R

Download

Created: 16th May 2022 at 12:06, Last updated: 6th Nov 2024 at 15:26

output/PCA_PC1_top10genes.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_05_As2_tr_limmaDE-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_05_As2_tr_limmaDE-R

Download

Created: 16th May 2022 at 12:07, Last updated: 6th Nov 2024 at 15:26

output/PCA_PC2_top10genes.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_05_As2_tr_limmaDE-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_05_As2_tr_limmaDE-R

Download

Created: 16th May 2022 at 12:07, Last updated: 6th Nov 2024 at 15:26

_Assay_METADATA.TXT

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_04_mapReadsToAs2-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_04_mapReadsToAs2-STAR

Download

Created: 16th May 2022 at 10:36, Last updated: 6th Nov 2024 at 15:26

_Assay_METADATA.TXT

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_05_As2_tr_limmaDE-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_05_As2_tr_limmaDE-R

Download

Created: 16th May 2022 at 10:36, Last updated: 6th Nov 2024 at 15:26

scripts/STAR_commands_ReadsToAs2.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_04_mapReadsToAs2-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_04_mapReadsToAs2-STAR

Download

Created: 16th May 2022 at 12:05, Last updated: 6th Nov 2024 at 15:26

output/P_citri_alldata_RNAseq_logFC_padj_counts.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_05_As2_tr_limmaDE-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_05_As2_tr_limmaDE-R

Download

Created: 16th May 2022 at 12:06, Last updated: 6th Nov 2024 at 15:26

output/P_citri_alldata_RNAseq_logFC_padj_counts.xlsx

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_05_As2_tr_limmaDE-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_05_As2_tr_limmaDE-R

Download

Created: 16th May 2022 at 12:06, Last updated: 6th Nov 2024 at 15:26

_Assay_METADATA.TXT

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_03_mapAs2ToGenome-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_03_mapAs2ToGenome-STAR

Download

Created: 16th May 2022 at 10:36, Last updated: 6th Nov 2024 at 15:26

scripts/Pcitri_tr2_IPS_commands.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_02_assembly2-IPS/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_02_assembly2-IPS

Download

Created: 16th May 2022 at 11:58, Last updated: 6th Nov 2024 at 15:26

output/PcSpadesTRsofttoGenome_STARlong.Aligned.sorted2.out.matchAnnot.parsed.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_03_mapAs2ToGenome-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_03_mapAs2ToGenome-STAR

Download

Created: 16th May 2022 at 11:58, Last updated: 6th Nov 2024 at 15:26

output/PcSpadesTRsofttoGenome_STARlong.Aligned.sorted2.out.matchAnnot.txt.zip

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_03_mapAs2ToGenome-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_03_mapAs2ToGenome-STAR

Download

Created: 16th May 2022 at 11:58, Last updated: 6th Nov 2024 at 15:26

scripts/STARlong_MatchAnnot_commands_mapAs2ToGenome.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_03_mapAs2ToGenome-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_03_mapAs2ToGenome-STAR

Download

Created: 16th May 2022 at 12:04, Last updated: 6th Nov 2024 at 15:26

_Assay_METADATA.TXT

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_02_assembly2-IPS/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_02_assembly2-IPS

Download

Created: 16th May 2022 at 10:36, Last updated: 6th Nov 2024 at 15:26

input/params.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_01_assembly2-rnaSPAdes/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_01_assembly2-rnaSPAdes

Download

Created: 16th May 2022 at 11:57, Last updated: 6th Nov 2024 at 15:26

reports/preprocessing_log.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_01_assembly2-rnaSPAdes/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_01_assembly2-rnaSPAdes

Download

Created: 16th May 2022 at 11:58, Last updated: 6th Nov 2024 at 15:26

scripts/Pcitri_tr2_rnaSpades_commands.txt

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_01_assembly2-rnaSPAdes/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_01_assembly2-rnaSPAdes

Download

Created: 16th May 2022 at 11:58, Last updated: 6th Nov 2024 at 15:26

output/soft_filtered_transcripts.pep.filtered.tsv.zip

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_02_assembly2-IPS/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_02_assembly2-IPS

Download

Created: 16th May 2022 at 11:58, Last updated: 6th Nov 2024 at 15:26

_STUDY_METADATA.TXT

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _S_P4_Pcitri_tr2-files

Download

Created: 16th May 2022 at 10:28, Last updated: 6th Nov 2024 at 15:26

_ASSAY_METADATA.TXT

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr1tr2combo/_A_02_CDHIT-Bioinfo/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr1tr2combo

Assays: _A_02_CDHIT-Bioinfo

Download

Created: 16th May 2022 at 10:35, Last updated: 6th Nov 2024 at 15:26

_Assay_METADATA.TXT

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_tr2/_A_01_assembly2-rnaSPAdes/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_tr2

Assays: _A_01_assembly2-rnaSPAdes

Download

Created: 16th May 2022 at 10:35, Last updated: 6th Nov 2024 at 15:26

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