Data files

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5735 Data files visible to you, out of a total of 7938

Experimental data for 3PG conversion to fructose-6-phosphase in reconstituted systems of gluconeogenesis of S. solfataricus

R code for the hormone analysis.

R code for differential expression analysis of sRNA-Seq.

Some additional files required for the R code (phenodata, feature data i.e. the GAL file and Agi4x44PreProcess downloaded package, as it is not maintained on BioConductor anymore).

Code used for the analysis of microarray data.

Archive containing some phenotyping images (.tar.gz).

No description specified

Creator: Ulrike Wittig

Submitter: Maja Rey

No description specified
No description specified

Data file for PLaSMo accesssion ID PLM_76, version 1

Data file for PLaSMo accesssion ID PLM_76, version 1

TPM counts for protein coding genes, alongside functional annotations

LFQ intensities derived from proteomics measurements

Source code for running simulations

Information for RNA and protein samples and cultures they were derived from.

No description specified

Creator: Angeles Hueso-Gil

Submitter: Angeles Hueso-Gil

Images used for training and validation of deep learning algorithm to determine biofilm composition of mixed species biofilms on mineral grains

phasiRNAs and their counts identified in the MOA samples for sRNA-Seq.

Creators: None

Submitter: Ziva Ramsak

phasiRNAs and their RPM normalised counts identified in the MOA samples for sRNA-Seq.

Creators: None

Submitter: Ziva Ramsak

Differential expression of phasiRNAs between various comparison groups (Sheet: comparisons), with log2-fold changes and Benjamini-Hochberg FDR corrected p-values given.

Creators: None

Submitter: Ziva Ramsak

vsiRNAs and their counts identified in the MOA samples for sRNA-Seq.

Creators: None

Submitter: Ziva Ramsak

vsiRNAs and their RPM normalised counts identified in the MOA samples for sRNA-Seq.

Creators: None

Submitter: Ziva Ramsak

miRNA stem-loop RT-qPCR for sRNA-Seq data validation. sRNA expression results obtained by sRNA-seq were validated by stem-loop RT-qPCR. For validation experiments, the same RNA samples as used for sRNA-Seq were analysed.

Creators: None

Submitter: Ziva Ramsak

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