Filtered dataset - anaerobic to aerobic .csv

Version 1

Gene_name,Gene_ID,2min/0min,5min/0min,10min/0min,15min/0min,20min/0min,Description
b0031,dapB,,,,0.47,0.44,dihydrodipicolinate reductase
b0032,carA,,,,3.1,3.13,carbamoyl phosphate synthetase small subunit - glutamine amidotransferase
b0033,carB,,,2.44,3.47,4.56,carbamoyl-phosphate synthase large subunit
b0034,caiF,0.47,0.26,0.28,0.26,0.3,DNA-binding transcriptional activator
b0046,kefF,,,2.29,,2.43,flavoprotein subunit for the KefC potassium efflux system
b0114,aceE,,7.16,6.3,5.16,5.8,pyruvate dehydrogenase - decarboxylase component E1 - thiamin-binding
b0115,aceF,,5.1,4.98,4.77,5.19,pyruvate dehydrogenase - dihydrolipoyltransacetylase component E2
b0116,lpd,,4.03,4.01,3.96,4.53,lipoamide dehydrogenase - E3 component is part of three enzyme complexes
b0118,acnB,,4.12,3.36,3.54,2.85,bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase
b0124,gcd,,2.56,3.52,3.76,5.7,glucose dehydrogenase
b0126,can,,2.25,2.15,2.61,2.92,carbonic anhydrase
b0150,fhuA,,3.37,3.37,3.31,4.07,ferrichrome outer membrane transporter
b0151,fhuC,,2.44,2.09,3.04,2.93,iron-hydroxamate transporter subunit ; ATP-binding component of ABC superfamily
b0168,map,,,,,2.13,methionine aminopeptidase
b0197,metQ,,2.04,,,,DL-methionine transporter subunit ; periplasmic-binding component of ABC superfamily
b0199,metN,,2.68,,,,DL-methionine transporter subunit ; ATP-binding component of ABC superfamily
b0210,yafE,,,,0.45,,predicted S-adenosyl-L-methionine-dependent methyltransferase
b0221,fadE,,,2.31,2.31,2.05,acyl coenzyme A dehydrogenase
b0240,crl,2.63,3.19,2.56,2.75,2.55,DNA-binding transcriptional regulator
b0260,mmuP,,4.17,,,,CP4-6 prophage; predicted S-methylmethionine transporter
b0261,mmuM,,3.32,,,,CP4-6 prophage; S-methylmethionine:homocysteine methyltransferase
b0269,yagF,,,,,2.01,CP4-6 prophage; predicted dehydratase
b0272,yagI,,,2.08,2.99,3.87,CP4-6 prophage; predicted DNA-binding transcriptional regulator
b0273,argF,,,2.46,3.95,5.61,CP4-6 prophage; ornithine carbamoyltransferase 2 - chain F
b0287,yagU,,2.09,,2.18,,conserved inner membrane protein
b0311,betA,,3.79,3.34,2.99,2.72,choline dehydrogenase - a flavoprotein
b0312,betB,,6.29,5.22,4.9,4.16,betaine aldehyde dehydrogenase - NAD-dependent
b0313,betI,3.4,7.35,6.25,5.18,4.02,DNA-binding transcriptional repressor
b0314,betT,,3.33,2.56,2.65,2.57,choline transporter of high affinity
b0319,yahE,,,,2,2.25,predicted protein
b0337,codA,,,,,2.17,cytosine deaminase
b0352,mhpE,,0.45,,,,4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase - class I
b0365,tauA,,,,2.36,,taurine transporter subunit ; periplasmic-binding component of ABC superfamily
b0366,tauB,,,2.18,2.26,2.2,taurine transporter subunit ; ATP-binding component of ABC superfamily
b0392,ykiA,,0.29,0.24,0.25,0.22,predicted protein
b0404,yajB,,,,,2.01,conserved protein
b0428,cyoE,,6.6,8.6,8.1,8.92,protoheme IX farnesyltransferase
b0429,cyoD,,19.35,19.06,18.81,19.95,cytochrome o ubiquinol oxidase subunit IV
b0430,cyoC,,19.63,16.16,19.31,17.72,cytochrome o ubiquinol oxidase subunit III
b0431,cyoB,,17.1,17.88,15.86,15.16,cytochrome o ubiquinol oxidase subunit I
b0432,cyoA,5.32,17.37,15.28,17.52,16.99,cytochrome o ubiquinol oxidase subunit II
b0453,ybaY,,3.53,3.63,4.02,3.4,predicted outer membrane lipoprotein
b0458,ylaC,,2.52,2.19,2.34,2.38,predicted inner membrane protein
b0459,maa,,0.38,0.41,0.4,0.36,maltose O-acetyltransferase
b0468,ybaN,,,,2.17,,conserved inner membrane protein
b0484,copA,,0.45,0.33,0.29,0.33,copper transporter
b0553,nmpC,,0.43,0.13,0.2,0.14,DLP12 prophage; truncated outer membrane porin (pseudogene)
b0570,cusS,,0.35,0.36,0.28,0.27,sensory histidine kinase in two-component regulatory system with CusR - senses copper ions
b0571,cusR,0.35,0.26,0.25,0.27,0.25,DNA-binding response regulator in two-component regulatory system with CusS
b0572,cusC,0.31,0.09,0.06,0.06,0.06,copper/silver efflux system - outer membrane component
b0573,cusF,,0.23,0.08,0.06,0.06,periplasmic copper-binding protein
b0574,cusB,,0.1,0.07,0.08,0.08,copper/silver efflux system - membrane fusion protein
b0575,cusA,,0.35,0.25,0.21,0.25,copper/silver efflux system - membrane component
b0584,fepA,,3,4.16,4.41,5.2,iron-enterobactin outer membrane transporter
b0585,fes,,2.08,2.21,2.47,2.63,enterobactin/ferric enterobactin esterase
b0586,entF,,,2.1,2.37,2.54,enterobactin synthase multienzyme complex component -  ATP-dependent
b0590,fepD,,2.21,2.05,2.47,2.5,iron-enterobactin transporter subunit ; membrane component of ABC superfamily
b0591,ybdA,,,2.1,2.35,2.72,predicted transporter
b0594,entE,,7.14,7.62,10.39,11.17,2 -3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex
b0595,entB,,3,5.46,6.63,7.47,isochorismatase
b0596,entA,,3.04,6.3,7.72,8.61,2 -3-dihydro-2 -3-dihydroxybenzoate dehydrogenase
b0597,ybdB,,,5.48,6.41,7.42,conserved protein
b0599,ybdH,,3.57,,,,predicted oxidoreductase
b0600,ybdL,,2.9,,,,methionine aminotransferase - PLP-dependent
b0605,ahpC,2.19,4.17,3.65,2.61,2.89,alkyl hydroperoxide reductase - C22 subunit
b0606,ahpF,,2.82,,,,alkyl hydroperoxide reductase - F52a subunit - FAD/NAD(P)-binding
b0621,dcuC,,0.35,0.33,0.33,0.29,anaerobic C4-dicarboxylate transport
b0628,lipA,,,2.04,2.08,2.49,lipoate synthase
b0651,rihA,,0.5,0.4,0.44,0.37,ribonucleoside hydrolase 1
b0684,fldA,,,,,2.12,flavodoxin 1
b0693,speF,,2.28,,,,ornithine decarboxylase isozyme - inducible
b0721,sdhC,5.09,9.55,5.32,4.83,3.28,succinate dehydrogenase - membrane subunit - binds cytochrome b556
b0722,sdhD,4.4,8.46,4.4,5.54,2.65,succinate dehydrogenase - membrane subunit - binds cytochrome b556
b0723,sdhA,,8.63,4.53,3.75,3.01,succinate dehydrogenase - flavoprotein subunit
b0724,sdhB,,8.35,5.78,3.89,2.84,succinate dehydrogenase - FeS subunit
b0725,b0725,,3.99,2.52,2.11,2.06,"FALSE ANNOTATION (Riley2005) - """"orf - hypothetical protein"""""
b0726,sucA,,3.31,3.41,3.52,2.74,2-oxoglutarate decarboxylase - thiamin-requiring
b0727,sucB,,,3.46,3.18,2.4,dihydrolipoyltranssuccinase
b0728,sucC,,,3.97,3.19,2.43,succinyl-CoA synthetase - beta subunit
b0750,nadA,,,,,0.42,quinolinate synthase - subunit A
b0751,pnuC,,,,,0.43,predicted nicotinamide mononucleotide transporter
b0755,gpmA,,2.35,2.87,3.06,2.2,phosphoglyceromutase 1
b0774,bioA,,,,2.32,2.51,7 -8-diaminopelargonic acid synthase - PLP-dependent
b0775,bioB,,,,2,2.25,biotin synthase
b0776,bioF,,,,2.11,2.76,8-amino-7-oxononanoate synthase
b0777,bioC,,,,,2.79,predicted methltransferase - enzyme of biotin synthesis
b0782,moaB,,,,,0.45,molybdopterin biosynthesis protein B
b0790,ybhP,,,,2.04,1.94,predicted DNase
b0804,ybiX,,,,1.99,2.01,conserved protein
b0814,ompX,,,,,2.94,outer membrane protein
b0836,yliH,,,,0.33,0.21,conserved protein
b0849,grxA,4.76,5.75,3.19,2.68,2.65,glutaredoxin 1 - redox coenzyme for ribonucleotide reductase (RNR1a)
b0850,ybjC,,,,1.98,2.48,predicted inner membrane protein
b0855,potG,,2.53,,2.42,2,putrescine transporter subunit: ATP-binding component of ABC superfamily
b0871,poxB,,,2.18,2.79,3.24,pyruvate dehydrogenase (pyruvate oxidase) - thiamin-dependent - FAD-binding
b0880,cspD,,,0.36,0.33,0.39,cold shock protein homolog
b0895,dmsB,,0.4,0.23,0.21,0.22,dimethyl sulfoxide reductase - anaerobic - subunit B
b0896,dmsC,,,0.44,0.44,0.46,dimethyl sulfoxide reductase - anaerobic - subunit C
b0897,ycaC,,,,,2.3,predicted hydrolase
b0903,pflB,,0.46,0.4,0.37,0.44,pyruvate formate lyase I
b0904,focA,,0.39,0.25,0.29,0.26,formate transporter
b0919,ycbJ,,,0.41,0.37,0.38,conserved protein
b0929,ompF,,,,0.41,0.33,outer membrane porin 1a (Ia;b;F)
b0932,pepN,,,2.04,,,aminopeptidase N
b0972,hyaA,,,0.2,0.12,0.09,hydrogenase 1 - small subunit
b0973,hyaB,,,0.25,0.14,0.12,hydrogenase 1 - large subunit
b0974,hyaC,,,0.27,0.16,0.16,hydrogenase 1 - b-type cytochrome subunit
b0975,hyaD,,,0.26,0.16,0.1,protein involved in processing of HyaA and HyaB proteins
b0976,hyaE,,,0.45,0.3,0.35,protein involved in processing of HyaA and HyaB proteins
b0977,hyaF,,,0.3,0.2,0.2,protein involved in nickel incorporation into hydrogenase-1 proteins
b1006,ycdG,,,,,2.04,predicted transporter
b1014,putA,,2.12,,,,fused DNA-binding transcriptional regulator ; proline dehydrogenase ; pyrroline-5-carboxylate dehydrogenase
b1016M,ycdN,2,2.94,2.75,3.08,3.01,NOT IN UP TO DATE ANNOTATION high-affinity iron permease
b1018,ycdO,,2.27,2.24,2.45,2.64,conserved protein
b1019,ycdB,,,,2.11,2.16,conserved protein
b1024,ycdS,,,,0.45,0.46,predicted outer membrane protein
b1101,ptsG,,,0.17,0.16,0.19,fused glucose-specific PTS enzymes: IIBcomponent ; IIC component
b1109,ndh,6.46,10.16,6.37,6.34,4.7,respiratory NADH dehydrogenase 2/cupric reductase
b1112,ycfR,,2.71,4.01,5.43,6.04,predicted protein
b1135,ymfC,,,,,2.03,23S rRNA pseudouridine synthase
b1136,icd,,4.3,3.6,,,e14 prophage; isocitrate dehydrogenase - specific for NADP+
b1164,ycgZ,,,,2.28,2.29,predicted protein
b1165,ymgA,,,,2.42,2.49,predicted protein
b1166,ymgB,,,,2.07,,predicted protein
b1172,ymgG,,0.47,0.39,0.47,,predicted protein
b1189,dadA,2.55,3.44,2.57,2.48,,D-amino acid dehydrogenase
b1190,dadX,2.08,3.8,3.47,2.76,2.46,alanine racemase 2 - PLP-binding
b1200,dhaK,,0.42,0.31,0.31,0.3,dihydroxyacetone kinase - N-terminal domain
b1224,narG,,0.21,0.13,0.11,0.15,nitrate reductase 1 - alpha subunit
b1225,narH,,0.43,0.27,0.25,0.28,nitrate reductase 1 - beta (Fe-S) subunit
b1226,narJ,,,0.28,0.21,0.23,molybdenum-cofactor-assembly chaperone subunit (delta subunit) of nitrate reductase 1
b1241,adhE,,0.37,0.37,0.34,0.33,fused acetaldehyde-CoA dehydrogenase ; iron-dependent alcohol dehydrogenase ; pyruvate-formate lyase deactivase
b1245,oppC,,,0.47,,,oligopeptide transporter subunit ; membrane component of ABC superfamily
b1246,oppD,,,0.44,,0.49,oligopeptide transporter subunit ; ATP-binding component of ABC superfamily
b1252,tonB,,2.7,2.6,2.96,3.17,membrane spanning protein in TonB-ExbB-ExbD complex
b1256,ompW,,0.47,0.16,0.13,0.12,outer membrane protein W
b1265,trpL,,,,0.48,,trp operon leader peptide
b1275,cysB,,,2.3,2.51,2.38,DNA-binding transcriptional dual regulator - O-acetyl-L-serine-binding
b1276,acnA,,2.05,2.24,2.58,2.68,aconitate hydratase 1
b1287,yciW,,,2.05,2.41,2.32,predicted oxidoreductase
b1297,puuA,,,2.58,3.83,4.64,gamma-Glu-putrescine synthase
b1298,puuD,,3.1,3.38,4.93,5.97,gamma-Glu-GABA hydrolase
b1300,puuC,,,,2.73,3.5,gamma-Glu-gamma-aminobutyraldehyde dehydrogenase -  NAD(P)H-dependent
b1301,puuB,,,,3.15,4.38,gamma-Glu-putrescine oxidase - FAD/NAD(P)-binding
b1302,puuE,,,,2.5,3.51,GABA aminotransferase - PLP-dependent
b1324,tpx,,2.14,2.39,2.47,2.48,lipid hydroperoxide peroxidase
b1332,ynaJ,2.17,2.67,2.11,2.06,,predicted inner membrane protein
b1376,uspF,,0.5,0.48,0.35,0.34,stress-induced protein - ATP-binding protein
b1378,ydbK,,,2.3,3.4,3.17,fused predicted pyruvate-flavodoxin oxidoreductase: conserved protein ; conserved protein ; FeS binding protein
b1380,ldhA,2.43,2.39,2.17,1.99,,fermentative D-lactate dehydrogenase - NAD-dependent
b1426,ydcH,,,,0.39,0.4,predicted protein
b1452,yncE,,5.96,5.12,8.84,9.12,conserved protein
b1463,nhoA,,,,2.34,2.48,N-hydroxyarylamine O-acetyltransferase
b1481,bdm,,,,2.06,3.42,biofilm-dependent modulation protein
b1492,gadC,,,,,0.49,predicted glutamate:gamma-aminobutyric acid antiporter
b1528,ydeA,,,2.18,2.47,2.67,predicted arabinose transporter
b1541,ydfZ,,,0.4,0.25,0.19,conserved protein
b1587,ynfE,,0.46,0.34,0.46,0.46,oxidoreductase subunit
b1588,ynfF,,0.48,0.3,0.25,0.26,oxidoreductase subunit
b1589,ynfG,,,,0.13,,oxidoreductase - Fe-S subunit
b1590,ynfH,,,0.29,0.31,0.26,oxidoreductase - membrane subunit
b1593,ynfK,0.45,0.36,0.34,0.31,0.36,predicted dethiobiotin synthetase
b1594,dgsA,,0.43,0.44,0.4,0.39,DNA-binding transcriptional repressor
b1681,sufD,,,,2.06,2.09,component of SufBCD complex
b1682,sufC,,,,,2.27,component of SufBCD complex - ATP-binding component of ABC superfamily
b1683,sufB,,,,,2.02,component of SufBCD complex
b1684,sufA,,,,2.22,2.12,Fe-S cluster assembly protein
b1690,ydiM,,,,0.4,0.46,predicted transporter
b1702,pps,,2.86,3.37,2.99,2.86,phosphoenolpyruvate synthase
b1729,ydjN,,2.42,2.44,2.78,2.27,predicted transporter
b1748,astC,,,2.05,2.27,2.08,succinylornithine transaminase - PLP-dependent
b1750,ydjX,0.26,0.24,0.21,0.2,0.18,predicted inner membrane protein
b1752,ydjZ,,0.38,0.33,0.31,0.32,conserved inner membrane protein
b1753,ynjA,,,,0.46,,conserved protein
b1757,ynjE,,,0.43,0.41,0.39,predicted thiosulfate sulfur transferase
b1761,gdhA,,,0.45,0.4,0.38,glutamate dehydrogenase - NADP-specific
b1778,yeaA,2.91,3.44,2.84,2.94,2.61,methionine sulfoxide reductase B
b1779,gapA,,,,,0.46,glyceraldehyde-3-phosphate dehydrogenase A
b1795,yeaQ,,,,2,2.41,conserved inner membrane protein
b1817,manX,,,0.23,0.14,0.1,fused mannose-specific PTS enzymes: IIA component ; IIB component
b1818,manY,,,0.26,0.13,0.09,mannose-specific enzyme IIC component of PTS
b1819,manZ,,,0.24,0.14,0.11,mannose-specific enzyme IID component of PTS
b1841,yobA,,,2.1,2.52,2.09,conserved protein
b1847,yebF,,,,,2.03,predicted protein
b1854,pykA,,0.47,0.43,0.45,0.44,pyruvate kinase II
b1891,flhC,,0.48,,,,DNA-binding transcriptional dual regulator with FlhD
b1896,otsA,,,,2.04,2.1,trehalose-6-phosphate synthase
b1905,ftn,,0.23,0.14,0.12,0.11,ferritin iron storage protein (cytoplasmic)
b1906,yecH,,0.44,0.38,0.35,0.36,predicted protein
b1917,yecC,,,2.48,2.96,2.87,predicted transporter subunit: ATP-binding component of ABC superfamily
b1918,yecS,,,2.18,2.5,2.49,predicted transporter subunit: membrane component of ABC superfamily
b1919,yedO,,,2.22,2.51,2.3,D-cysteine desulfhydrase - PLP-dependent
b1920,fliY,,2.66,3,3.05,3.3,cystine transporter subunit ; periplasmic-binding component of ABC superfamily
b1929,yedE,,,0.48,0.44,0.49,predicted inner membrane protein
b1987,cbl,,1.94,3.75,4.34,4.06,DNA-binding transcriptional activator of cysteine biosynthesis
b2013,yeeE,,2.09,2.39,2.42,2.21,predicted inner membrane protein
b2081,yegQ,,,2.01,2.39,,predicted peptidase
b2087M,gatR,,,0.33,0.32,0.32,galactitol utilization operon repressor
b2091,gatD,,,0.11,0.06,0.05,galactitol-1-phosphate dehydrogenase - Zn-dependent and NAD(P)-binding
b2092,gatC,,,0.13,0.06,0.05,galactitol-specific enzyme IIC component of PTS
b2093,gatB,,,0.19,0.11,0.08,galactitol-specific enzyme IIB component of PTS
b2094,gatA,,0.36,0.07,0.04,0.03,galactitol-specific enzyme IIA component of PTS
b2095,gatZ,,,0.12,0.09,0.04,D-tagatose 1 -6-bisphosphate aldolase 2 - subunit
b2096,gatY,,0.22,0.09,0.1,0.07,D-tagatose 1 -6-bisphosphate aldolase 2 - catalytic subunit
b2125,yehT,,,0.46,0.44,,predicted response regulator in two-component system withYehU
b2141,yohJ,2.15,2.89,,,,conserved inner membrane protein
b2142,yohK,2.03,3.71,2.13,,,predicted inner membrane protein
b2146,yeiT,,0.27,0.22,0.2,0.28,predicted oxidoreductase
b2153,folE,,,,2.49,2.08,GTP cyclohydrolase I
b2155,cirA,,,,2.61,3.1,ferric iron-catecholate outer membrane transporter
b2167,fruA,,,0.41,0.49,0.4,fused fructose-specific PTS enzymes: IIBcomponent ; IIC components
b2168,fruK,,0.46,0.47,0.42,0.42,fructose-1-phosphate kinase
b2169,fruB,,0.44,0.45,0.4,0.43,fused fructose-specific PTS enzymes: IIA component ; HPr component
b2175,spr,0.46,0.27,0.21,0.22,0.22,predicted peptidase - outer membrane lipoprotein
b2181,yejG,2.5,3.73,4.09,4.5,4.09,predicted protein
b2202,napC,,,0.47,0.47,,nitrate reductase - cytochrome c-type -periplasmic
b2205,napG,,,0.44,0.42,,ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB)
b2207,napD,,0.45,0.46,0.37,0.33,assembly protein for periplasmic nitrate reductase
b2208,napF,,,0.49,,,ferredoxin-type protein - predicted role in electron transfer to periplasmic nitrate reductase (NapA)
b2210,mqo,,,2.24,2.43,2.31,malate dehydrogenase - FAD/NAD(P)-binding domain
b2211,yojI,,3.64,3.5,4.23,4.58,fused predicted multidrug transport subunits of ABC superfamily: membrane component ; ATP-binding component
b2234,nrdA,,2.91,2.77,3.19,2.68,ribonucleoside diphosphate reductase 1 - alpha subunit
b2294,yfbU,,,,,0.45,conserved protein
b2296,ackA,,,,,0.49,acetate kinase A and propionate kinase 2
b2306,hisP,,,2.04,2.06,2.21,histidine/lysine/arginine/ornithine transporter subunit ; ATP-binding component of ABC superfamily
b2309,hisJ,,2.04,,2.21,2.39,histidine/lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily
b2310,argT,,2.31,2.29,2.37,2.18,lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily
b2329,aroC,,0.38,0.18,0.2,0.18,chorismate synthase
b2388,glk,,,0.42,0.44,0.37,glucokinase
b2391,b2391,,,,,2.01,orf - hypothetical protein
b2398,yfeC,,,,,0.46,predicted DNA-binding transcriptional regulator
b2415,ptsH,,,0.38,0.41,0.36,phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr)
b2421,cysM,,,2.17,2.21,2.13,cysteine synthase B (O-acetylserine sulfhydrolase B)
b2422,cysA,,,2.2,2.2,,sulfate/thiosulfate transporter subunit ; ATP-binding component of ABC superfamily
b2424,cysU,,2.34,2.66,2.32,2.32,sulfate/thiosulfate transporter subunit ; membrane component of ABC superfamily
b2425,cysP,,2.43,2.83,2.78,2.2,thiosulfate transporter subunit ; periplasmic-binding component of ABC superfamily
b2497,uraA,,,,,2.04,uracil transporter
b2507,guaA,,,2.07,2.57,2.93,GMP synthetase (glutamine aminotransferase)
b2508,guaB,,,2.33,2.89,2.62,IMP dehydrogenase
b2518,ndk,2.31,3.89,3.94,4.94,5.85,multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase
b2522,sseB,,,,2.02,2,rhodanase-like enzyme - sulfur transfer from thiosulfate
b2523,pepB,,,3.5,4.26,3.71,aminopeptidase B
b2524,yfhJ,,2.2,3.96,4.22,3.48,conserved protein
b2525,fdx,,2.59,3.98,4.58,3.48,[2Fe-2S] ferredoxin
b2526,hscA,,2.04,2.33,2.97,2.46,DnaK-like molecular chaperone specific for IscU
b2527,hscB,,5.97,6.61,8.36,5.79,DnaJ-like molecular chaperone specific for IscU
b2528,iscA,,4.5,5.18,4.84,4.09,FeS cluster assembly protein
b2529,iscU,,5.81,5.42,6.29,4.24,scaffold protein
b2530,iscS,,8.61,8.95,11.47,6.87,cysteine desulfurase (tRNA sulfurtransferase) - PLP-dependent
b2531,iscR,4.39,11.8,15.68,14.77,12.52,DNA-binding transcriptional repressor
b2579,yfiD,6.08,2.55,,,,pyruvate formate lyase subunit
b2582,trxC,5.43,5.15,2.97,2.66,2.8,thioredoxin 2
b2587,kgtP,2.35,5.2,4.55,4.58,4,alpha-ketoglutarate transporter
b2597,yfiA,,0.32,0.27,0.31,0.22,cold shock protein associated with 30S ribosomal subunit
b2673,nrdH,2.32,8.89,13.68,12.72,13.33,glutaredoxin-like protein
b2674,nrdI,,3.49,4.82,4.93,4.94,protein that stimulates ribonucleotide reduction
b2675,nrdE,,1.97,2.65,2.78,2.63,ribonucleoside-diphosphate reductase 2 - alpha subunit
b2677,proV,,,,,2.01,glycine betaine transporter subunit ; ATP-binding compoent of ABC superfamily
b2678,proW,,,,,2.5,glycine betaine transporter subunit ; membrane component of ABC superfamily
b2707,srlR,0.48,,,,,DNA-bindng transcriptional repressor
b2713,hydN,,0.43,0.39,0.38,0.43,formate dehydrogenase-H - [4Fe-4S] ferredoxin subunit
b2718,hycH,,,0.46,0.45,0.42,protein required for maturation of hydrogenase 3
b2719,hycG,,,0.36,0.37,0.34,hydrogenase 3 and formate hydrogenase complex - HycG subunit
b2720,hycF,,,0.3,0.36,0.33,formate hydrogenlyase complex iron-sulfur protein
b2721,hycE,,,0.37,0.44,0.42,hydrogenase 3 - large subunit
b2722,hycD,,,0.37,0.46,0.39,hydrogenase 3 - membrane subunit
b2723,hycC,,,0.36,0.4,0.39,hydrogenase 3 - membrane subunit
b2724,hycB,,,0.44,0.47,0.44,hydrogenase 3 - Fe-S subunit
b2725,hycA,,0.37,0.34,0.36,0.39,regulator of the transcriptional regulator FhlA
b2726,hypA,,0.34,0.29,0.32,0.28,protein involved in nickel insertion into hydrogenases 3
b2727,hypB,,0.31,0.23,0.24,0.23,GTP hydrolase involved in nickel liganding into hydrogenases
b2728,hypC,,0.32,0.25,0.28,0.27,protein required for maturation of hydrogenases 1 and 3
b2729,hypD,,,0.44,,0.48,protein required for maturation of hydrogenases
b2750,cysC,,,2.49,3.67,2.92,adenosine 5'-phosphosulfate kinase
b2751,cysN,,,3.5,3.41,2.76,sulfate adenylyltransferase - subunit 1
b2752,cysD,,2.38,2.73,3.1,2.68,sulfate adenylyltransferase - subunit 2
b2762,cysH,,,2.89,2.99,2.45,3'-phosphoadenosine 5'-phosphosulfate reductase
b2779,eno,,,,0.49,,enolase
b2800,fucA,,,0.3,,0.3,L-fuculose-1-phosphate aldolase
b2805,fucR,,,,0.49,,DNA-binding transcriptional activator
b2818,argA,,,,2.34,2.94,fused acetylglutamate kinase homolog (inactive) ; amino acid N-acetyltransferase
b2825,ppdB,,,,2.26,,conserved protein
b2904,gcvH,,2.16,,,,glycine cleavage complex lipoylprotein
b2905,gcvT,,2.23,,,,aminomethyltransferase - tetrahydrofolate-dependent - subunit (T protein) of glycine cleavage complex
b2924,mscS,,,,2.01,,mechanosensitive channel
b2942,metK,,2.11,,,,methionine adenosyltransferase 1
b2957,ansB,,,0.45,0.36,0.38,periplasmic L-asparaginase II
b2980,glcC,2.17,2.3,2.7,2.75,2.22,DNA-binding transcriptional dual regulator - glycolate-binding
b2994,hybC,,,,0.46,0.44,hydrogenase 2 - large subunit
b2995,hybB,,,0.39,0.32,0.27,predicted hydrogenase 2 cytochrome b type component
b2996,hybA,,,,0.38,0.33,hydrogenase 2 4Fe-4S ferredoxin-type component
b2997,hybO,,0.46,0.27,0.16,0.17,hydrogenase 2 - small subunit
b3005,exbD,4.72,7.98,7.65,8.59,8.99,membrane spanning protein in TonB-ExbB-ExbD complex
b3006,exbB,4.95,9.55,8.29,9.51,9.66,membrane spanning protein in TonB-ExbB-ExbD complex
b3011,yqhD,,,0.45,0.44,0.36,alcohol dehydrogenase - NAD(P)-dependent
b3041,ribB,,,0.37,0.35,0.35,3 -4-dihydroxy-2-butanone-4-phosphate synthase
b3070,yqjH,,2.38,2.33,,,predicted siderophore interacting protein
b3073,ygjG,,,2.1,2.55,2.88,putrescine:2-oxoglutaric acid aminotransferase - PLP-dependent
b3156,yhbS,,0.49,,0.44,0.45,predicted acyltransferase with acyl-CoA N-acyltransferase domain
b3158,yhbU,0.41,0.41,0.37,0.39,0.34,predicted peptidase (collagenase-like)
b3172,argG,,,2.19,2.75,3.45,argininosuccinate synthetase
b3209,elbB,,0.3,0.14,0.15,0.12,isoprenoid biosynthesis protein with amidotransferase-like domain
b3234,degQ,,0.44,0.4,0.35,0.35,serine endoprotease - periplasmic
b3236,mdh,,2.48,2.72,2.57,1.99,malate dehydrogenase - NAD(P)-binding
b3337,bfd,2.56,3.06,3.44,3.75,3.79,bacterioferritin-associated ferredoxin
b3364,tsgA,,,,2.17,2.73,predicted transporter
b3365,nirB,,0.24,0.2,0.19,0.2,nitrite reductase - large subunit - NAD(P)H-binding
b3366,nirD,,0.48,0.45,0.41,,nitrite reductase - NAD(P)H-binding - small subunit
b3367M,nirC,,0.48,0.42,0.37,0.39,nitrite transporter
b3403,pck,,,0.48,0.4,0.46,phosphoenolpyruvate carboxykinase
b3414,gntY,,2.11,,1.98,,predicted gluconate transport associated protein
b3418,malT,,0.33,0.21,0.21,0.16,fused conserved protein ; DNA-binding transcriptional activator - maltotriose-ATP-binding
b3429,glgA,,,,,0.44,glycogen synthase
b3477,nikB,,,0.45,0.47,0.39,nickel transporter subunit ; membrane component of ABC superfamily
b3478,nikC,,,0.4,0.32,0.33,nickel transporter subunit ; membrane component of ABC superfamily
b3479,nikD,,0.29,0.29,0.25,0.25,nickel transporter subunit ; ATP-binding component of ABC superfamily
b3512,gadE,,,,,0.43,DNA-binding transcriptional activator
b3513,mdtE,,,,,0.47,multidrug resistance efflux transporter
b3556,cspA,,,,2.18,2.96,major cold shock protein
b3573,yiaI,,0.47,0.47,0.46,,predicted hydrogenase - 4Fe-4S ferredoxin-type component
b3592,yibF,,,2.01,,,predicted glutathione S-transferase
b3603,lldP,,2.39,2.58,2.83,2.07,L-lactate permease
b3604,lldR,,2.09,2.3,2.39,2.06,DNA-binding transcriptional repressor
b3605,lldD,,3.14,3.02,3.38,2.84,L-lactate dehydrogenase - FMN-linked
b3661,nlpA,,2.46,3.99,4.14,3.69,cytoplasmic membrane lipoprotein-28
b3687,ibpA,,,,2.09,,heat shock chaperone
b3708,tnaA,,0.3,0.19,0.18,0.2,tryptophanase/L-cysteine desulfhydrase - PLP-dependent
b3744,asnA,,,0.44,0.42,0.43,asparagine synthetase A
b3767M,ilvG,,,,,0.36,acetolactate synthase ii - large subunit
b3774,ilvC,,,,0.47,0.36,ketol-acid reductoisomerase - NAD(P)-binding
b3820,yigI,2.96,4.75,4.53,3.9,4.17,conserved protein
b3828,metR,,5.91,2.63,2.31,1.99,DNA-binding transcriptional activator - homocysteine-binding
b3829,metE,,2.92,3.64,3.74,3.52,5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
b3870,glnA,,,0.46,,,glutamine synthetase
b3908,sodA,,,2.62,4.96,5.18,superoxide dismutase - Mn
b3913M,yiiO,,,,,0.43,uncharacterized periplasmic protein
b3916,pfkA,,,,0.46,,6-phosphofructokinase I
b3917,sbp,,3.4,17.73,19.03,17.44,sulfate transporter subunit ; periplasmic-binding component of ABC superfamily
b3924,fpr,,,,2.55,2.75,ferredoxin-NADP reductase
b3936,rpmE,,,,,2.08,50S ribosomal subunit protein L31
b3938,metJ,,2.6,,,,DNA-binding transcriptional repressor - S-adenosylmethionine-binding
b3939,metB,2.37,7.82,2.95,2.44,2.28,cystathionine gamma-synthase - PLP-dependent
b3941,metF,2.18,4.6,2.53,2.35,2.14,5 -10-methylenetetrahydrofolate reductase
b3945,gldA,,,0.35,0.25,0.23,glycerol dehydrogenase - NAD
b3957,argE,,,,2.65,2.99,acetylornithine deacetylase
b3958,argC,,,,3.19,3.08,N-acetyl-gamma-glutamylphosphate reductase - NAD(P)-binding
b3959,argB,,,,2.3,3.07,acetylglutamate kinase
b3960,argH,,,2.24,2.79,4.22,argininosuccinate lyase
b3962,sthA,2.02,2.6,2.32,2.83,2.54,pyridine nucleotide transhydrogenase - soluble
b3993,thiE,,,,2.11,2.15,thiamin phosphate synthase (thiamin phosphate pyrophosphorylase)
b3994,thiC,,,,2.12,2.11,thiamin (pyrimidine moiety) biosynthesis protein
b3995,rsd,,2.24,,2.08,,stationary phase protein - binds sigma 70 RNA polymerase subunit
b4002,zraP,,,0.48,0.42,0.44,Zn-binding periplasmic protein
b4013,metA,,3.27,,,,homoserine transsuccinylase
b4015,aceA,,2.06,,,2.03,isocitrate lyase
b4032,malG,,,0.47,,,maltose transporter subunit ; membrane component of ABC superfamily
b4033,malF,,0.33,0.4,0.34,0.32,maltose transporter subunit ; membrane component of ABC superfamily
b4034,malE,,0.43,0.2,0.16,0.16,maltose transporter subunit ; periplasmic-binding component of ABC superfamily
b4035,malK,,0.32,0.14,0.13,0.12,fused maltose transport subunit - ATP-binding component of ABC superfamily ; regulatory protein
b4036,lamB,,,,,0.48,maltose outer membrane porin (maltoporin)
b4037,malM,,,0.31,0.26,0.27,maltose regulon periplasmic protein
b4039,ubiC,,2,,2.26,,chorismate pyruvate lyase
b4060,yjcB,,,,,2.59,predicted inner membrane protein
b4062,soxS,8.85,13.2,12.39,14.14,13.62,DNA-binding transcriptional dual regulator
b4068,yjcH,,2.64,1.97,,,conserved inner membrane protein involved in acetate transport
b4069,acs,,,,2.21,,acetyl-CoA synthetase
b4070,nrfA,,0.18,0.13,0.1,0.1,nitrite reductase - formate-dependent - cytochrome
b4071,nrfB,,0.26,0.18,0.18,0.19,nitrite reductase - formate-dependent - penta-heme cytochrome c
b4072,nrfC,,0.4,0.34,0.32,0.33,formate-dependent nitrite reductase - 4Fe4S subunit
b4073,nrfD,,0.37,0.32,0.32,0.39,formate-dependent nitrite reductase - membrane subunit
b4093,phnO,,,,1.96,,predicted acyltransferase with acyl-CoA N-acyltransferase domain
b4111,proP,,2.33,2.47,3.14,3.63,proline/glycine betaine transporter
b4122,fumB,,0.45,0.45,0.37,0.38,anaerobic class I fumarate hydratase (fumarase B)
b4123,dcuB,,0.43,0.4,0.46,0.34,C4-dicarboxylate antiporter
b4139,aspA,,0.45,0.45,0.45,0.45,aspartate ammonia-lyase
b4151,frdD,,,,,0.3,fumarate reductase (anaerobic) - membrane anchor subunit
b4152,frdC,,0.38,0.33,0.3,0.32,fumarate reductase (anaerobic) - membrane anchor subunit
b4153,frdB,,0.25,0.23,0.2,0.22,fumarate reductase (anaerobic) - Fe-S subunit
b4154,frdA,,0.33,0.3,0.37,0.34,fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit
b4188,yjfN,,,,2.22,,predicted protein
b4189,yjfO,,,,3.61,3.14,conserved protein
b4205,ytfA,,,2.02,2.4,2.35,predicted transcriptional regulator
b4217,ytfK,,,,,2.14,conserved protein
b4240,treB,,,0.47,0.46,0.46,fused trehalose(maltose)-specific PTS enzyme:  IIB component ; IIC component
b4254,argI,,,2.45,3.25,4.16,ornithine carbamoyltransferase 1
b4292,fecR,,2.12,2.55,2.66,2.5,KpLE2 phage-like element; transmembrane signal transducer for ferric citrate transport
b4293,fecI,,2.74,2.59,3.46,4.08,KpLE2 phage-like element; RNA polymerase - sigma 19 factor
b4326,yjiD,,,,2.12,2.08,DNA replication/recombination/repair protein
b4328,iadA,,,0.49,,0.42,isoaspartyl dipeptidase
b4329,yjiG,,,0.4,0.38,0.3,conserved inner membrane protein
b4330,yjiH,,,0.31,0.31,0.33,conserved inner membrane protein
b4334,yjiL,,0.3,0.31,0.28,0.31,predicted ATPase - activator of (R)-hydroxyglutaryl-CoA dehydratase
b4335,yjiM,0.45,0.17,0.13,0.12,0.11,predicted 2-hydroxyglutaryl-CoA dehydratase
b4367,fhuF,3.59,5.43,6.32,8.07,8.03,ferric iron reductase involved in ferric hydroximate transport
b4376,osmY,,4,5.74,7.09,5.25,periplasmic protein
b4380,yjjI,,0.23,0.24,0.22,0.21,conserved protein