Read me file, PLM_24_ 1 Version 1
Data file for PLaSMo accesssion ID PLM_24, version 1
SEEK ID: https://fairdomhub.org/data_files/2584?version=1
Filename:
77readme.txt
Format: Plain text document
Size: 224 Bytes
Download the model file (*.sml), parameter.zip, and display configuration file and save in the same folder (directory) unpack the zip file in the same folder Load the model and support files into Simile from that folder.
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Creators and SubmitterViews: 2540 Downloads: 127
Created: 10th Jan 2019 at 16:46
Last updated: 10th Jan 2019 at 16:54
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Version 1 (earliest) Created 10th Jan 2019 at 16:46 by BioData SynthSys
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Projects: PlaSMo model repository
Institutions: University of Edinburgh
The Centre for Engineering Biology is the University of Edinburgh's research organisation in interdisciplinary, Synthetic and Systems Biology, founded in 2023 as the successor to SynthSys, itself founded in 2012 as the successor to the Centre for Systems Biology at Edinburgh (CSBE). CSBE was newly founded in 2007. The Centre for Engineering Biology is a hub organisation that links across multiple, major funding awards, including an Engineering Biology Mission Hub, and EPSRC C-loop.
Projects: Millar group, PHYTOCAL: Phytochrome Control of Resource Allocation and Growth in Arabidopsis and in Brassicaceae crops, TiMet, POP - the Parameter Optimisation Problem, Regulation of flowering time in natural conditions, PlaSMo model repository, BioDare1
Web page: https://biology.ed.ac.uk/centre-engineering-biology
What is PlaSMo? PlaSMo stands for Plant Systems-biology Modelling Ensuring the achievements of yesterday's Mathematical Modellers will be available for the Systems Biologists of tomorrow.
Our aims
To identify plant mathematical models useful to the UK plant systems biology community, which are currently in a variety of legacy formats and in danger of being lost To represent these models in a declarative XML-based format, which is closer to the systems biology standard SBML To evaluate the behaviour ...
Programme: Centre for Engineering Biology (prev. SynthSys)
Public web page: Not specified
Collection of models submitted to PLaSMo by Jonathan Massheder and automatically transferred to FAIRDOM Hub.
Submitter: BioData SynthSys
Studies: LINTUL_V2 - PLM_42, SUCROS1 - PLM_24
Assays: LINTUL_V2 - PLM_42, version 1, SUCROS1 - PLM_24, version 1
The model is applied to spring wheat, with ample supply of nutrients and water, also without pests, diseases and weeds. Radiation and temperature, being the most important environmental factors, and crop characteristics determine growth and development. Crop growth and development are simulated based on underlying chemical, physiological and physical processes. Dry matter accumulation is calculated from daily crop CO2 assimilation based on leaf CO2 assimilation and taking into account the respiration ...
The model is applied to spring wheat, with ample supply of nutrients and water, also without pests, diseases and weeds. Radiation and temperature, being the most important environmental factors, and crop characteristics determine growth and development. Crop growth and development are simulated based on underlying chemical, physiological and physical processes. Dry matter accumulation is calculated from daily crop CO2 assimilation based on leaf CO2 assimilation and taking into account the respiration ...
Submitter: BioData SynthSys
Biological problem addressed: Gene Regulatory Network
Investigation: Massheder, Jonathan
Study: SUCROS1 - PLM_24
