One pot cascade 16

Conversion of XYL to KG in one pot cascade of Weimberg pathway enzymes of Caulobacter crescentus, using old enzymes with optimal protein distribution, with NAD recycling, measured in NMR. https://jjj.bio.vu.nl/models/experiments/shen2020_fig3d/simulate

DOI: 10.15490/fairdomhub.1.assay.991.2

Zenodo URL: None

Created at: 30th Jan 2020 at 08:41

Contents

One-Pot-Cascade 16 data

Data files for the conversion of XYL to KG, via the Caulobacter crescentus Weimberg pathway, using old enzymes: XDH, XLA, XAD, KDXD, KGSADH, with NAD recycling, and optimal protein distribution.

  • OnePotCascade-16.xlsx

One pot cascade 16

Model for the Caulobacter crescentus Weimberg pathway, describing the conversion of Xyl to KG, using old enzymes, with optimal protein distribution. If the Mathematica notebook is downloaded and the data file is downloaded in the same directory, then the notebook can be evaluated, and the figure in the manuscript for cascade 16 will be reproduced.

  • onePotCasc16-SEEK.nb

Cascade analysis (shen2)

Model for the Caulobacter crescentus Weimberg pathway, describing the conversion of Xyl to KG.

  • shen2.xml
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Citation
Snoep, J., & Shen, L. (2020). One pot cascade 16. FAIRDOMHub. https://doi.org/10.15490/FAIRDOMHUB.1.ASSAY.991.2
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Snapshot 2 (30th Jan 2020) DOI
Snapshot 1 (8th Jan 2020) DOI
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Created: 30th Jan 2020 at 08:41

Last updated: 30th Jan 2020 at 09:04

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