One pot cascade 16

Conversion of XYL to KG in one pot cascade of Weimberg pathway enzymes of Caulobacter crescentus, using old enzymes with optimal protein distribution, with NAD recycling, measured in NMR. https://jjj.bio.vu.nl/models/experiments/shen2019_fig3d/simulate

DOI: 10.15490/fairdomhub.1.assay.991.1

Zenodo URL: None

Created at: 8th Jan 2020 at 14:17

Contents

One-Pot-Cascade 16 data

Data files for the conversion of XYL to KG, via the Caulobacter crescentus Weimberg pathway, using old enzymes: XDH, XLA, XAD, KDXD, KGSADH, with NAD recycling, and optimal protein distribution.

  • OnePotCascade-16.xlsx

One pot cascade 16

Model for the Caulobacter crescentus Weimberg pathway, describing the conversion of Xyl to KG, using old enzymes, with optimal protein distribution. If the Mathematica notebook is downloaded and the data file is downloaded in the same directory, then the notebook can be evaluated, and the figure in the manuscript for cascade 16 will be reproduced.

  • onePotCasc16-SEEK.nb

Cascade analysis (shen2)

Model for the Caulobacter crescentus Weimberg pathway, describing the conversion of Xyl to KG.

  • shen2.xml
Fingerprints

These checksums allow you to check a Snapshot you have downloaded hasn't been modified. For details on how to use these please visit this guide

MD5: 8f1ff3708e342971d38958b94ce0345c

SHA1: 508338fd2bb49bd3bdec7e83bf09ae088421005b

Citation
Snoep, J., & Shen, L. (2020). One pot cascade 16. FAIRDOMHub. https://doi.org/10.15490/FAIRDOMHUB.1.ASSAY.991.1
Snapshots
Snapshot 2 (30th Jan 2020) DOI
Snapshot 1 (8th Jan 2020) DOI
Activity

Views: 364   Downloads: 7

Created: 8th Jan 2020 at 14:17

Last updated: 8th Jan 2020 at 14:17

Powered by
(v.1.12.0)
Copyright © 2008 - 2022 The University of Manchester and HITS gGmbH

By continuing to use this site you agree to the use of cookies