Data files

What is a Data file?

Filters

Query

Created At

Updated At

Tag

Submitter

Project

Programme

Creator

Assay type

38 Data files visible to you, out of a total of 38

/reports/SupplementaryFile3.html

_p_stRT

Supplementary File 3 - Taxonomi cclassification of Désirée, PW363 and Rywal representative transcripts. Sequences were classified using Centrifuge and Sankey plots were generated using Pavian. Layer _p_stRT/_I_STRT/_S_04_stPanTr/_A_08_cdhit_centrifuge_3cvs-GFFmerged

Creator: Maja Zagorscak

Submitter: Maja Zagorscak

DOI: 10.15490/fairdomhub.1.datafile.3509.1

Investigations: _I_STRT

Studies: SupplementaryInformation, _S_04_stPanTr

Assays: Supplementary Information, _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 20th Mar 2020 at 19:08, Last updated: 23rd Mar 2020 at 16:55

/scripts/02_centrifuge_commands.txt

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:14, Last updated: 22nd Mar 2020 at 23:14

/scripts/01_prepareFasta.sh

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:14, Last updated: 22nd Mar 2020 at 23:14

/output/Uploaded_sample_set-report.html

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:14, Last updated: 22nd Mar 2020 at 23:14

/output/trueSingle.polyploid.tr_report.txt

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:14, Last updated: 22nd Mar 2020 at 23:14

/output/trueSingle.polyploid.tr_kreport.txt

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:14, Last updated: 22nd Mar 2020 at 23:14

/output/trueSingle.polyploid.tr_centrifuge.txt

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:14, Last updated: 22nd Mar 2020 at 23:14

/output/trueSingle.polyploid.cds_report.txt

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:14, Last updated: 22nd Mar 2020 at 23:14

/output/trueSingle.polyploid.cds_kreport.txt

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:13, Last updated: 22nd Mar 2020 at 23:13

/output/trueSingle.polyploid.cds_centrifuge.txt

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:13, Last updated: 22nd Mar 2020 at 23:13

/output/trueSingle.DM.cds_report.txt

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:13, Last updated: 22nd Mar 2020 at 23:13

/output/trueSingle.DM.cds_kreport.txt

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:13, Last updated: 22nd Mar 2020 at 23:13

/output/trueSingle.DM.cds_centrifuge.txt

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:13, Last updated: 22nd Mar 2020 at 23:13

/output/Tetraploid_transcriptomes-report.html

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:13, Last updated: 22nd Mar 2020 at 23:13

/output/sankey-trueSingle.polyploid.tr.html

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:13, Last updated: 22nd Mar 2020 at 23:13

/output/sankey-trueSingle.polyploid.cds.html

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:13, Last updated: 22nd Mar 2020 at 23:13

/output/sankey-trueSingle.DM.cds.html

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:13, Last updated: 22nd Mar 2020 at 23:13

/output/sankey-Rywal.html

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:13, Last updated: 22nd Mar 2020 at 23:13

/output/sankey-PW363.html

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:13, Last updated: 22nd Mar 2020 at 23:13

/output/sankey-Desiree.html

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:12, Last updated: 22nd Mar 2020 at 23:12

/output/Rywal_report.txt

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:12, Last updated: 22nd Mar 2020 at 23:12

/output/Rywal_kreport.txt

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:12, Last updated: 22nd Mar 2020 at 23:12

/output/Rywal_centrifuge.txt

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:12, Last updated: 22nd Mar 2020 at 23:12

/output/PW363_report.txt

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:12, Last updated: 22nd Mar 2020 at 23:12

/output/PW363_kreport.txt

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:12, Last updated: 22nd Mar 2020 at 23:12

/output/PW363_centrifuge.txt

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:12, Last updated: 22nd Mar 2020 at 23:12

/output/pavian_class_summary_perc.csv

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:12, Last updated: 22nd Mar 2020 at 23:12

/output/pavian_class_summary_No.csv

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:12, Last updated: 22nd Mar 2020 at 23:12

/output/Desiree_report.txt

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:11, Last updated: 22nd Mar 2020 at 23:12

/output/Desiree_kreport.txt

_p_stRT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged

Creator: Andrej Blejec

Submitter: Andrej Blejec

Investigations: _I_STRT

Studies: _S_04_stPanTr

Assays: _A_08_centrifuge_3cvs-GFFmerged

Download

Created: 22nd Mar 2020 at 23:11, Last updated: 22nd Mar 2020 at 23:11

(v.1.14.2)

About FAIRDOMHub | Funding and Programmes | Credits | Terms & Conditions | Imprint | Cookie preferences

Copyright © 2008 - 2023 The University of Manchester and HITS gGmbH