_A_09_annotation-GFFmerged

Short Name: 09_annotation-GFFmerged Assay Class: DRY Assay Type: GFFmerged Title: Pan-transcriptome fasta files annotation Description: Annotation of pan-transcriptome and re-annotation of cultivar-specific transcriptomes pISA Assay creation date: 2020-03-11 pISA Assay creator: Maja Zagorscak Phenodata: None Featuredata: Data:

DOI: 10.15490/fairdomhub.1.assay.1268.1

Zenodo URL: None

Created at: 3rd Apr 2020 at 15:02

Contents

/input/path_to_files.txt

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • path_to_files.txt

/output/annot_stCuSTr-D_aa_all.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-D_aa_all.zip

/output/annot_stCuSTr-D_aa_alternatives.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-D_aa_alternatives.zip

/output/annot_stCuSTr-D_aa_representatives.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-D_aa_representatives.zip

/output/annot_stCuSTr-D_cds_all.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-D_cds_all.zip

/output/annot_stCuSTr-D_cds_alternatives.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-D_cds_alternatives.zip

/output/annot_stCuSTr-D_cds_representatives.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-D_cds_representatives.zip

/output/annot_stCuSTr-D_tr_all.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-D_tr_all.zip

/output/annot_stCuSTr-D_tr_alternatives.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-D_tr_alternatives.zip

/output/annot_stCuSTr-D_tr_representatives.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-D_tr_representatives.zip

/output/annot_stCuSTr-P_aa_all.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-P_aa_all.zip

/output/annot_stCuSTr-P_aa_alternatives.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-P_aa_alternatives.zip

/output/annot_stCuSTr-P_aa_representatives.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-P_aa_representatives.zip

/output/annot_stCuSTr-P_cds_all.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-P_cds_all.zip

/output/annot_stCuSTr-P_cds_alternatives.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-P_cds_alternatives.zip

/output/annot_stCuSTr-P_cds_representatives.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-P_cds_representatives.zip

/output/annot_stCuSTr-P_tr_all.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-P_tr_all.zip

/output/annot_stCuSTr-P_tr_alternatives.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-P_tr_alternatives.zip

/output/annot_stCuSTr-P_tr_representatives.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-P_tr_representatives.zip

/output/annot_stCuSTr-R_aa_all.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-R_aa_all.zip

/output/annot_stCuSTr-R_aa_alternatives.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-R_aa_alternatives.zip

/output/annot_stCuSTr-R_aa_representatives.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-R_aa_representatives.zip

/output/annot_stCuSTr-R_cds_all.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-R_cds_all.zip

/output/annot_stCuSTr-R_cds_alternatives.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-R_cds_alternatives.zip

/output/annot_stCuSTr-R_cds_representatives.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-R_cds_representatives.zip

/output/annot_stCuSTr-R_tr_all.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-R_tr_all.zip

/output/annot_stCuSTr-R_tr_alternatives.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stCuSTr-R_tr_alternatives.zip

/output/annot_stCuSTr-R_tr_representatives.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

/output/annot_stPanTr.aa.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stPanTr.aa.zip

/output/annot_stPanTr.cds.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stPanTr.cds.zip

/output/annot_stPanTr_alt.aa.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stPanTr_alt.aa.zip

/output/annot_stPanTr_alt.cds.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stPanTr_alt.cds.zip

/output/annot_stPanTr_rep.aa.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stPanTr_rep.aa.zip

/output/annot_stPanTr_rep.cds.zip

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annot_stPanTr_rep.cds.zip

/scripts/annotate.sh

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • annotate.sh

/_Assay_METADATA.TXT

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • _Assay_METADATA.TXT

/input/README.MD

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • README.MD

/output/README.MD

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • README.MD

/README.MD

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • README.MD

/scripts/README.MD

_p_stRT/_I_STRT/_S_04_stPanTr/_A_09_annotation-GFFmerged

  • README.MD
Fingerprints

These checksums allow you to check a Snapshot you have downloaded hasn't been modified. For details on how to use these please visit this guide

MD5: 118abc24d5975481bf5f627130a34c79

SHA1: 8130040194ae61d23f38cc34a72df86169b73fa9

Citation
Blejec, A. (2020). _A_09_annotation-GFFmerged. FAIRDOMHub. https://doi.org/10.15490/FAIRDOMHUB.1.ASSAY.1268.1
Snapshots
Snapshot 2 (12th Apr 2020) DOI
Snapshot 1 (3rd Apr 2020) DOI
Activity

Views: 445   Downloads: 4

Created: 3rd Apr 2020 at 15:02

Last updated: 3rd Apr 2020 at 15:03

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