Genome scale metabolic model of Sulfolobus solfataricus
specific scenario: modelling of L-fucose degradation pathways
Contributor: Jacqueline Wolf
Biological problem addressed: Metabolic Network
Snapshots: No snapshots
The new GEM of S. coelicolor developed by Tjasa Kumelj, Snorre Sulheim, Alexander Wentzel and Eivind Almaas in 2017/2018
Creators: Snorre Sulheim, Tjasa Kumelj
Contributor: Snorre Sulheim
Model type: Stoichiometric model
Model format: SBML
Environment: Not specified
DownloadMetabolic model of Sulfolobus solfataricus P2 in the SBML (xml) and metano (txt, sce, fba) format. Scenarios are specific for growth on D-glucose or L-fucose as sole carbon source. Different theoretical routes of L-fucose degradation were modeled (E. coli-like, Xanthomonas-like and lactaldehyde-forming). Highest overall agreement between the model and experimental data was observed for the lactaldehyde-forming route.
Creators: Jacqueline Wolf, Helge Stark, Dietmar Schomburg
Contributor: Jacqueline Wolf
Model type: Metabolic network
Model format: SBML
Environment: Not specified
Abstract (Expand)
Author: Bekaert M.
Date Published: 14th Nov 2012
Journal: PLoS One
