Assays
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AT0053: 4x3:21-LL
| Property | Value |
|---|---|
| BioDare ID | 13790860334747 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
LUC imaging under 3:21 cycles then constant light. Replicate of experiment AT0064; similar to AT0007, AT0028.
Purpose
photoperiod alteration study
Comments
Imaging started 23/01/07. Fungal infection on GI and CCR2 cca1 lhy mutant plate. CAB, GI, CCA1, CCR2 cca1 lhy groups ...
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0072: 4x9:15-DD
| Property | Value |
|---|---|
| BioDare ID | 12730759247526 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
LUC imaging short days to DD
Purpose
testing short day entrainment and phase on release to DD
Comments
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0070: 4x6:18-DD
| Property | Value |
|---|---|
| BioDare ID | 12730758135392 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
LUC imaging 6:18 LD to DD
Purpose
testing different photoperiod effect on entrainment and phase on release to LL
Comments
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0068: 4x3:21-DD
| Property | Value |
|---|---|
| BioDare ID | 12730756926569 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
LUC imaging 3:21 LD to DD
Purpose
testing different photoperiod effect on entrainment and phase on release to LL
Comments
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0033: 4x18:6-LL
| Property | Value |
|---|---|
| BioDare ID | 12730755909387 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
long day photoperiod experiment
Purpose
photoperiod experiment
Comments
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0032: 4x15:9-LL
| Property | Value |
|---|---|
| BioDare ID | 12730755364126 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
long day photoperiod experiment
Purpose
photoperiod experiment
Comments
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0066: 4x6:18-LL
| Property | Value |
|---|---|
| BioDare ID | 12730755208385 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
LUC imaging 6:18 LD to LL in RB light
Purpose
testing different photoperiod effect on entrainment and phase on release to LL
Comments
CCa1 green & white fungal contamination
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0030: 4x 9:15-LL
| Property | Value |
|---|---|
| BioDare ID | 12730754338062 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
short day photoperiod experiment
Purpose
photoperiod experiment
Comments
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0040: 4x 9:15-DD
| Property | Value |
|---|---|
| BioDare ID | 12730748392357 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
9:15 then DD
Purpose
9:15 then DD
Comments
cat3 infection, cut out groups + 4 individuals ELF3 low germination
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0039: 6:18 then DD
| Property | Value |
|---|---|
| BioDare ID | 12730747977016 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
6:18 then DD
Purpose
6:18 then DD
Comments
-infection -PRR9 groups died
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0046: 4x18:6-DD
| Property | Value |
|---|---|
| BioDare ID | 12730742348410 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
LUC imaging 18:6 blue+red into constant darkness
Purpose
testing acute light responses at dawn and dusk
Comments
Infection CCR2, cca1;lhy, cca1;lhy;gi, ELF4, PRR9, TOC1
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0045: 4x15:9-DD
| Property | Value |
|---|---|
| BioDare ID | 12730741023494 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
LUC imaging 15:9 blue+red into constant darkness
Purpose
testing acute light responses at dawn and dusk
Comments
Infection CAB, CCR2, cca1;lhy, cca1;lhy;gi, ELF4
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0064: 4x3:21-LL
| Property | Value |
|---|---|
| BioDare ID | 12730739172368 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
LUC imaging 3:21 LD to LL in RB light
Purpose
testing different photoperiod effect on entrainment and phase on release to LL
Comments
Plates wrong way round! contamination on cca1 lhy gi CCR2 & cca1lhy gi CCR2 plate
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0011 4x 12:12-LL
| Property | Value |
|---|---|
| BioDare ID | 12730738745576 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
4 days of 12hrs light, 12hrs dark into 3 days constant light
Purpose
changes to photoperiod
Comments
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0062: 4x6:18-LL
| Property | Value |
|---|---|
| BioDare ID | 12730737799143 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
LUC imaging 6:18 LD to LL in RB light
Purpose
testing different photoperiod effect on entrainment and phase on release to LL
Comments
white fungus over cca1 lhy gi CCR2 & cca1lhy gi CCR2 plate
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0010 4x 15:9-LL
| Property | Value |
|---|---|
| BioDare ID | 12730737091902 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
4 days of 15hrs light followed by 9hrs dark into constant light for 3 days
Purpose
changes to photoperiod
Comments
White fluffy infection on plate 4 - ELF3:LUC plate. Across whole plate
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0009 4x 9:15-LL
| Property | Value |
|---|---|
| BioDare ID | 12730736475311 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
4 days 9hrs light, 15hrs dark followed by 3 days in constant light
Purpose
changes to photoperiod
Comments
missed first image, started 11.25 am
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0061: 4x18:6-LL
| Property | Value |
|---|---|
| BioDare ID | 12730736018318 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
LUC imaging 18:6 LD to LL in RB light
Purpose
testing different photoperiod effect on entrainment and phase on release to LL
Comments
CCR2 in lhycca1 and lhy cca1 gi are contaminated.
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0007 4x 03:21-LL
| Property | Value |
|---|---|
| BioDare ID | 12730735093496 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
4 days 3hrs light 21 hrs dark followed by 3 days constant
Purpose
changes to photoperiod
Comments
plate no changed comment in lab bk
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0006 4x LD-3xLL
| Property | Value |
|---|---|
| BioDare ID | 12730734647405 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
4 days LD followed by 3 days constant light
Purpose
changes to photoperiod
Comments
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0005 4x SD-3xLL
| Property | Value |
|---|---|
| BioDare ID | 12730734291594 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
alternate 4 days SD followed by 3 days constant light
Purpose
changes to photoperiod
Comments
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0059: 4x15:09-LL
| Property | Value |
|---|---|
| BioDare ID | 12730733878982 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
LUC imaging 15:9 LD to LL in RB light
Purpose
testing different photoperiod effect on entrainment and phase on release to LL
Comments
LHy white & dead, white fungus over cca1 lhy gi CCR2 & cca1lhy gi CCR2 plate - does not affect CCR2
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0057: 4x12:12-LL
| Property | Value |
|---|---|
| BioDare ID | 12730731549609 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
LUC imaging 12:12 LD to LL in RB light
Purpose
testing different photoperiod effect on entrainment and phase on release to LL
Comments
CCR2:LUC in cca1 lhy and in cca1lhygi had white fungal contamination all over plate ELF3:LUC had low germination
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0055: 4x9:15-LL
| Property | Value |
|---|---|
| BioDare ID | 12730725716347 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
LUC imaging short days to LL in RB light
Purpose
testing short day entrainment and phase on release to LL
Comments
PRR9:LUC group dead, green colonies on 2x CCR2:LUC seedlings
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0091: 4x12:12-LL
| Property | Value |
|---|---|
| BioDare ID | 12730563219125 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
LUC imaging 12L:12D into constant light
Purpose
testing variation of rhythmicity across camera field of view, in single seedlings with CCA1 or TOC1 marker
Comments
Original analysis by John O'Neill; Data curated by Andrew Millar.
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0028: 4x 3:21-LL
| Property | Value |
|---|---|
| BioDare ID | 12730555174222 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
LUC imaging 3:21 blue+red into constant light, TOC1 data show anomalous dawn peak, so TOC1 data not used for phase analysis in Edwards et al. 2010
Purpose
testing circadian phase across photoperiods
Comments
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0073: 4x12:12-DD
| Property | Value |
|---|---|
| BioDare ID | 12730509509211 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
LUC imaging 12L:12D into constant dark
Purpose
testing phase changes of clock components under different photoperiods
Comments
microwave seed sterilisation
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0079: 4x12:12-DD
| Property | Value |
|---|---|
| BioDare ID | 12730498782920 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
LUC imaging 12L:12D into constant dark
Purpose
testing phase changes of clock components under different photoperiods
Comments
CCR2 plate (WT, lhy;cca1 and lhy;cca1;gi) infected all over by end of experiment
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0077: 4x3:21-DD
| Property | Value |
|---|---|
| BioDare ID | 12729891771943 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
LUC imaging 3L:21D into constant dark
Purpose
testing phase changes of clock components under different photoperiods
Comments
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished
AT0075: 4x18:6-DD
| Property | Value |
|---|---|
| BioDare ID | 12729849314623 |
| Author | Adrian Thomson |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
LUC imaging 18L:6D into constant dark
Purpose
testing phase changes of clock components under different photoperiods
Comments
microwave seed sterilisation Pedro prepared by editing groups from previous template
Submitter: Daniel Thedie
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Thomson Adrian
Study: Unpublished