Snapshot 1
DownloadDOI: 10.15490/fairdomhub.1.investigation.286.1
Zenodo URL: None
Created at: 17th Apr 2019 at 15:49
Reverse Engineering Directed Gene Regulatory Networks from Transcriptomics and Proteomics Data of Biomining Bacterial Communities
Supplementary files for the submission: Reverse Engineering Directed Gene Regulatory Networks from Transcriptomics and Proteomics Data of Biomining Bacterial Communities with Approximate Bayesian Computation and Steady-State Signalling Simulations
Supplementary files
Proteomics and transcriptomics data tables, sample IDs and description, source code
RNA data
Data derived from RNAseq
TPM counts
TPM counts for protein coding genes, alongside functional annotations
- ALL_tpm_with_funcats.tsv
Sample information
Information for RNA and protein samples and cultures they were derived from.
- Sample_Overview.xlsx
Proteome data
Data derived from protein samples
LFQ intensities
LFQ intensities derived from proteomics measurements
- raw_lfqs_merged_nonfiltered_funcats.tsv
Sample information
Information for RNA and protein samples and cultures they were derived from.
- Sample_Overview.xlsx
Simulations for network engineering
Scripts for running network simulations
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Created: 17th Apr 2019 at 15:49
Last updated: 17th Apr 2019 at 15:50
