Reverse Engineering Directed Gene Regulatory Networks from Transcriptomics and Proteomics Data of Biomining Bacterial Communities
DownloadSupplementary files for the submission: Reverse Engineering Directed Gene Regulatory Networks from Transcriptomics and Proteomics Data of Biomining Bacterial Communities with Approximate Bayesian Computation and Steady-State Signalling Simulations
DOI: 10.15490/fairdomhub.1.investigation.286.1
Zenodo URL: None
Created at: 17th Apr 2019 at 17:49
Supplementary files
Proteomics and transcriptomics data tables, sample IDs and description, source code
RNA data
Data derived from RNAseq
TPM counts
TPM counts for protein coding genes, alongside functional annotations
- ALL_tpm_with_funcats.tsv
Sample information
Information for RNA and protein samples and cultures they were derived from.
- Sample_Overview.xlsx
Proteome data
Data derived from protein samples
LFQ intensities
LFQ intensities derived from proteomics measurements
- raw_lfqs_merged_nonfiltered_funcats.tsv
Sample information
Information for RNA and protein samples and cultures they were derived from.
- Sample_Overview.xlsx
Simulations for network engineering
Scripts for running network simulations
These checksums allow you to check a Snapshot you have downloaded hasn't been modified. For details on how to use these please visit this guide
MD5: 57d1e0555d6e838ed547c3b92efc8672
SHA1: 179198b0c78b4ef24e4f5092bb8e25f201bd2c42
Views: 1120 Downloads: 22
Created: 17th Apr 2019 at 17:49
Last updated: 17th Apr 2019 at 17:50
