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| Datafile metadata | How to use this sheet Details on how to use this sheet and what the cells mean can be found by visiting: | ||||||||
| Data File Title: | samples-publishJB_CD4_NHP.xlsx | ||||||||
| Data File Description: | Batch sample publishing | ||||||||
| Project SEEK ID: | https://fairdomhub.org/projects/222 | ||||||||
| Master metadata sheet guide | |||||||||
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| Existing Assay SEEK ID: | https://fairdomhub.org/assays/2444 | ||||||||
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| Assay type: | Experimental_assay_type | Powered by: | |||||||
| Technology type: | Technology_type | ||||||||
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| UID | Name | DateOfBirth | Sex | Species | Origin | Facility | Notes | Scientist | Cohort | Supplier | Protocol | Study | Funder | TotalCFU | LungCFU | LymphNodeCFU | StudyDesign | Link_StudyDesign | NewGranulomaCount |
| NHP-220630FLY-16 | 12418 | 2011-03-03 00:00:00 | M | Macaca fascicularis | China | Flynn Lab | JF19-11A | JoAnne Flynn | IgG | Valley Biosystems | https://fairdomhub.org/sops/742 | CD4 Depletion Reinfection | NIH R01 AI114674 (Flynn, MPI Flynn/Fortune)The Consequences of Reinfection with M. tuberculosis | 3070 | 2750 | 320 | LibP: 2018-07-06 00:00:00; Antibiotics: 2018-09-07 00:00:00; Depletion: 2019-02-01 00:00:00; LibS: 2019-02-08 00:00:00; Nx: 2019-03-11 00:00:00 | https://fairdomhub.org/data_files/7360 | 1 |
| NHP-220630FLY-17 | 12518 | 2011-07-10 00:00:00 | M | Macaca fascicularis | China | Flynn Lab | JF19-22A | JoAnne Flynn | IgG | Valley Biosystems | https://fairdomhub.org/sops/742 | CD4 Depletion Reinfection | NIH R01 AI114674 (Flynn, MPI Flynn/Fortune)The Consequences of Reinfection with M. tuberculosis | 5375 | 5270 | 105 | LibP: 2018-07-06 00:00:00; Antibiotics: 2018-09-07 00:00:00; Depletion: 2019-02-22 00:00:00; LibS: 2019-03-01 00:00:00; Nx: 2019-04-03 00:00:00 | https://fairdomhub.org/data_files/7360 | 8 |
| NHP-220630FLY-18 | 12618 | 2010-02-15 00:00:00 | M | Macaca fascicularis | China | Flynn Lab | JF19-16A | JoAnne Flynn | IgG | Valley Biosystems | https://fairdomhub.org/sops/742 | CD4 Depletion Reinfection | NIH R01 AI114674 (Flynn, MPI Flynn/Fortune)The Consequences of Reinfection with M. tuberculosis | 16277.5 | 15557.5 | 720 | LibP: 2018-07-06 00:00:00; Antibiotics: 2018-09-07 00:00:00; Depletion: 2019-02-15 00:00:00; LibS: 2019-02-25 00:00:00; Nx: 2019-03-26 00:00:00 | https://fairdomhub.org/data_files/7360 | 10 |
| NHP-220630FLY-19 | 12718 | 2010-06-15 00:00:00 | M | Macaca fascicularis | China | Flynn Lab | JF19-12A | JoAnne Flynn | CD4 | Valley Biosystems | https://fairdomhub.org/sops/742 | CD4 Depletion Reinfection | NIH R01 AI114674 (Flynn, MPI Flynn/Fortune)The Consequences of Reinfection with M. tuberculosis | 197697.5 | 195897.5 | 1800 | LibP: 2018-07-06 00:00:00; Antibiotics: 2018-09-07 00:00:00; Depletion: 2019-02-15 00:00:00; LibS: 2019-02-25 00:00:00; Nx: 2019-03-19 00:00:00 | https://fairdomhub.org/data_files/7360 | 3 |
| NHP-220630FLY-20 | 12818 | 2012-09-23 00:00:00 | M | Macaca fascicularis | China | Flynn Lab | JF19-20A | JoAnne Flynn | CD4 | Valley Biosystems | https://fairdomhub.org/sops/742 | CD4 Depletion Reinfection | NIH R01 AI114674 (Flynn, MPI Flynn/Fortune)The Consequences of Reinfection with M. tuberculosis | 44470 | 44350 | 120 | LibP: 2018-07-06 00:00:00; Antibiotics: 2018-09-07 00:00:00; Depletion: 2019-02-22 00:00:00; LibS: 2019-03-01 00:00:00; Nx: 2019-04-01 00:00:00 | https://fairdomhub.org/data_files/7360 | 6 |
| NHP-220630FLY-21 | 12918 | 2011-08-07 00:00:00 | M | Macaca fascicularis | China | Flynn Lab | JF19-07A | JoAnne Flynn | Naive | Valley Biosystems | https://fairdomhub.org/sops/742 | CD4 Depletion Reinfection | NIH R01 AI114674 (Flynn, MPI Flynn/Fortune)The Consequences of Reinfection with M. tuberculosis | 966937.95918 | 615917.95918 | 351020 | LibP: NaT; Antibiotics: NaT; Depletion: NaT; LibS: 2019-02-08 00:00:00; Nx: 2019-03-05 00:00:00 | https://fairdomhub.org/data_files/7360 | 7 |
| NHP-220630FLY-22 | 13018 | 2010-08-28 00:00:00 | M | Macaca fascicularis | China | Flynn Lab | JF19-09A | JoAnne Flynn | Naive | Valley Biosystems | https://fairdomhub.org/sops/742 | CD4 Depletion Reinfection | NIH R01 AI114674 (Flynn, MPI Flynn/Fortune)The Consequences of Reinfection with M. tuberculosis | 534753.93258 | 110753.93258 | 424000 | LibP: NaT; Antibiotics: NaT; Depletion: NaT; LibS: 2019-02-08 00:00:00; Nx: 2019-03-07 00:00:00 | https://fairdomhub.org/data_files/7360 | 8 |
| NHP-220630FLY-23 | 13118 | 2010-10-27 00:00:00 | M | Macaca fascicularis | China | Flynn Lab | JF19-13A | JoAnne Flynn | Naive | Valley Biosystems | https://fairdomhub.org/sops/742 | CD4 Depletion Reinfection | NIH R01 AI114674 (Flynn, MPI Flynn/Fortune)The Consequences of Reinfection with M. tuberculosis | 564580 | 489155 | 75425 | LibP: NaT; Antibiotics: NaT; Depletion: NaT; LibS: 2019-02-25 00:00:00; Nx: 2019-03-19 00:00:00 | https://fairdomhub.org/data_files/7360 | 16 |
| NHP-220630FLY-24 | 13218 | 2010-03-09 00:00:00 | M | Macaca fascicularis | China | Flynn Lab | JF19-06A | JoAnne Flynn | CD4 | Valley Biosystems | https://fairdomhub.org/sops/742 | CD4 Depletion Reinfection | NIH R01 AI114674 (Flynn, MPI Flynn/Fortune)The Consequences of Reinfection with M. tuberculosis | 69550 | 65040 | 4510 | LibP: 2018-07-06 00:00:00; Antibiotics: 2018-09-07 00:00:00; Depletion: 2019-02-01 00:00:00; LibS: 2019-02-08 00:00:00; Nx: 2019-03-05 00:00:00 | https://fairdomhub.org/data_files/7360 | 8 |
| NHP-220630FLY-25 | 13318 | 2010-09-21 00:00:00 | M | Macaca fascicularis | China | Flynn Lab | JF19-08A | JoAnne Flynn | CD4 | Valley Biosystems | https://fairdomhub.org/sops/742 | CD4 Depletion Reinfection | NIH R01 AI114674 (Flynn, MPI Flynn/Fortune)The Consequences of Reinfection with M. tuberculosis | 30660.662983 | 30580.662983 | 80 | LibP: 2018-07-06 00:00:00; Antibiotics: 2018-09-07 00:00:00; Depletion: 2019-02-01 00:00:00; LibS: 2019-02-08 00:00:00; Nx: 2019-03-07 00:00:00 | https://fairdomhub.org/data_files/7360 | 4 |
| NHP-220630FLY-26 | 13418 | 2013-06-10 00:00:00 | M | Macaca fascicularis | China | Flynn Lab | JF19-14A | JoAnne Flynn | CD4 | Valley Biosystems | https://fairdomhub.org/sops/742 | CD4 Depletion Reinfection | NIH R01 AI114674 (Flynn, MPI Flynn/Fortune)The Consequences of Reinfection with M. tuberculosis | 164970 | 159075 | 5895 | LibP: 2018-07-06 00:00:00; Antibiotics: 2018-09-07 00:00:00; Depletion: 2019-02-15 00:00:00; LibS: 2019-02-25 00:00:00; Nx: 2019-03-21 00:00:00 | https://fairdomhub.org/data_files/7360 | 11 |
| NHP-220630FLY-27 | 13518 | 2010-10-01 00:00:00 | M | Macaca fascicularis | China | Flynn Lab | JF19-18A | JoAnne Flynn | CD4 | Valley Biosystems | https://fairdomhub.org/sops/742 | CD4 Depletion Reinfection | NIH R01 AI114674 (Flynn, MPI Flynn/Fortune)The Consequences of Reinfection with M. tuberculosis | 392220 | 386550 | 5670 | LibP: 2018-07-06 00:00:00; Antibiotics: 2018-09-07 00:00:00; Depletion: 2019-02-22 00:00:00; LibS: 2019-03-01 00:00:00; Nx: 2019-03-28 00:00:00 | https://fairdomhub.org/data_files/7360 | 14 |
| NHP-220630FLY-28 | 13618 | 2011-06-18 00:00:00 | M | Macaca fascicularis | China | Flynn Lab | JF19-17A | JoAnne Flynn | IgG | Valley Biosystems | https://fairdomhub.org/sops/742 | CD4 Depletion Reinfection | NIH R01 AI114674 (Flynn, MPI Flynn/Fortune)The Consequences of Reinfection with M. tuberculosis | 9120 | 9120 | LibP: 2018-07-06 00:00:00; Antibiotics: 2018-09-07 00:00:00; Depletion: 2019-02-15 00:00:00; LibS: 2019-02-25 00:00:00; Nx: 2019-03-26 00:00:00 | https://fairdomhub.org/data_files/7360 | 6 | |
| NHP-220630FLY-29 | 13718 | 2010-10-27 00:00:00 | M | Macaca fascicularis | China | Flynn Lab | JF19-15A | JoAnne Flynn | Naive | Valley Biosystems | https://fairdomhub.org/sops/742 | CD4 Depletion Reinfection | NIH R01 AI114674 (Flynn, MPI Flynn/Fortune)The Consequences of Reinfection with M. tuberculosis | 388840 | 352840 | 36000 | LibP: NaT; Antibiotics: NaT; Depletion: NaT; LibS: 2019-02-25 00:00:00; Nx: 2019-03-21 00:00:00 | https://fairdomhub.org/data_files/7360 | 10 |
| NHP-220630FLY-30 | 13818 | 2012-08-16 00:00:00 | M | Macaca fascicularis | China | Flynn Lab | JF19-19A | JoAnne Flynn | Naive | Valley Biosystems | https://fairdomhub.org/sops/742 | CD4 Depletion Reinfection | NIH R01 AI114674 (Flynn, MPI Flynn/Fortune)The Consequences of Reinfection with M. tuberculosis | 1827470 | 848490 | 978980 | LibP: NaT; Antibiotics: NaT; Depletion: NaT; LibS: 2019-03-01 00:00:00; Nx: 2019-03-28 00:00:00 | https://fairdomhub.org/data_files/7360 | 18 |
| NHP-220630FLY-31 | 13918 | 2010-06-19 00:00:00 | M | Macaca fascicularis | China | Flynn Lab | JF19-21A | JoAnne Flynn | Naive | Valley Biosystems | https://fairdomhub.org/sops/742 | CD4 Depletion Reinfection | NIH R01 AI114674 (Flynn, MPI Flynn/Fortune)The Consequences of Reinfection with M. tuberculosis | 317395 | 289100 | 28295 | LibP: NaT; Antibiotics: NaT; Depletion: NaT; LibS: 2019-03-01 00:00:00; Nx: 2019-04-01 00:00:00 | https://fairdomhub.org/data_files/7360 | 11 |
| NHP-220630FLY-32 | 14018 | 2011-09-25 00:00:00 | M | Macaca fascicularis | China | Flynn Lab | JF19-24A | JoAnne Flynn | IgG | Valley Biosystems | https://fairdomhub.org/sops/742 | CD4 Depletion Reinfection | NIH R01 AI114674 (Flynn, MPI Flynn/Fortune)The Consequences of Reinfection with M. tuberculosis | 13535 | 12855 | 680 | LibP: 2018-07-06 00:00:00; Antibiotics: 2018-09-07 00:00:00; Depletion: 2019-02-22 00:00:00; LibS: 2019-03-01 00:00:00; Nx: 2019-04-04 00:00:00 | https://fairdomhub.org/data_files/7360 | 5 |
| NHP-220630FLY-33 | 14118 | 2011-09-14 00:00:00 | M | Macaca fascicularis | China | Flynn Lab | JF19-10A | JoAnne Flynn | IgG | Valley Biosystems | https://fairdomhub.org/sops/742 | CD4 Depletion Reinfection | NIH R01 AI114674 (Flynn, MPI Flynn/Fortune)The Consequences of Reinfection with M. tuberculosis | 3590 | 3590 | LibP: 2018-07-06 00:00:00; Antibiotics: 2018-09-07 00:00:00; Depletion: 2019-02-01 00:00:00; LibS: 2019-02-08 00:00:00; Nx: 2019-03-11 00:00:00 | https://fairdomhub.org/data_files/7360 | 4 | |
| NHP-220630FLY-34 | 14218 | 2013-02-07 00:00:00 | M | Macaca fascicularis | China | Flynn Lab | JF19-23A | JoAnne Flynn | CD4 | Valley Biosystems | https://fairdomhub.org/sops/742 | CD4 Depletion Reinfection | NIH R01 AI114674 (Flynn, MPI Flynn/Fortune)The Consequences of Reinfection with M. tuberculosis | 105267.5 | 76431.5 | 28836 | LibP: 2018-07-06 00:00:00; Antibiotics: 2018-09-07 00:00:00; Depletion: 2019-02-22 00:00:00; LibS: 2019-03-01 00:00:00; Nx: 2019-04-03 00:00:00 | https://fairdomhub.org/data_files/7360 | 19 |
