All models of FAIRDOMHub, collected as references inside an XML file
The purpose of this is using it in ModelXChange.
SEEK ID: https://fairdomhub.org/data_files/4969?version=2
Filename:
fairdomhub-models-list-for-modelxchange-2022-02-18.xml
Format: XML document
Size: 341 KB
<?xml version='1.0' encoding='utf-8'?> <database> <description>The FAIRDOMHub is built upon the SEEK software suite, which is an open source web platform for sharing scientific research assets, processes and outcomes.</description> <contact>community@fair-dom.org</contact> <entry_count>384</entry_count> <release>Continuously, state of 2022-02-18 18:57:13.689911</release> <release_date>2022-02-18 18:57:13.689911</release_date> <contact>community@fair-dom.org</contact> <url>https://fairdomhub.org</url> <entries> <entry id="16"> <name>Basic kinetic model of Escherichia coli's electron transport chain (ETC)</name> <description>Basic kinetic model of Escherichia coli's electron transport chain (ETC)</description> <cross_references /> <dates> <created>2009-10-26T14:48:20.000Z</created> <last_modified>2011-03-04T16:21:24.000Z</last_modified> <submission>2009-10-26T14:48:20.000Z</submission> <publication>2011-03-04T16:21:24.000Z</publication> </dates> <additional_fields> <field name="submitter">Sebastian Henkel</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/16?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Stuttgart</field> </additional_fields> </entry> <entry id="18"> <name>Development of agent-based models describing the response of Escherichia coli to changes in oxygen availability</name> <description>Development of agent-based models describing the response of Escherichia coli to changes in oxygen availability</description> <cross_references /> <dates> <created>2009-10-26T14:48:20.000Z</created> <last_modified>2009-10-26T14:48:20.000Z</last_modified> <submission>2009-10-26T14:48:20.000Z</submission> <publication>2009-10-26T14:48:20.000Z</publication> </dates> <additional_fields> <field name="submitter">Afsaneh Maleki-Dizaji</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/18?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">University of Sheffield</field> </additional_fields> </entry> <entry id="20"> <name>sigB-response_starvation_shakeflask</name> <description>sigB-response_starvation_shakeflask</description> <cross_references /> <dates> <created>2009-10-26T14:48:21.000Z</created> <last_modified>2009-10-28T17:03:19.000Z</last_modified> <submission>2009-10-26T14:48:21.000Z</submission> <publication>2009-10-28T17:03:19.000Z</publication> </dates> <additional_fields> <field name="submitter">Ulf Liebal</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/20?version=1</field> <field name="ModelFormat">Matlab package</field> <field name="submitter_affiliation">University of Rostock</field> </additional_fields> </entry> <entry id="21"> <name>Model for ED pathway in Sulfolobus solfataricus</name> <description>Model for ED pathway in Sulfolobus solfataricus</description> <cross_references /> <dates> <created>2009-10-26T14:48:21.000Z</created> <last_modified>2009-10-26T14:48:21.000Z</last_modified> <submission>2009-10-26T14:48:21.000Z</submission> <publication>2009-10-26T14:48:21.000Z</publication> </dates> <additional_fields> <field name="submitter">Peter Ruoff</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/21?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">University of Stavanger</field> </additional_fields> </entry> <entry id="23"> <name>A Mathematical Model of Metabolism and Regulation Provides a Systems-Level View of the Oxygen Response of Escherichia coli</name> <description>A Mathematical Model of Metabolism and Regulation Provides a Systems-Level View of the Oxygen Response of Escherichia coli</description> <cross_references /> <dates> <created>2009-10-26T14:48:21.000Z</created> <last_modified>2014-03-18T12:34:43.000Z</last_modified> <submission>2009-10-26T14:48:21.000Z</submission> <publication>2014-03-18T12:34:43.000Z</publication> </dates> <additional_fields> <field name="submitter">Michael Ederer</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/23?version=5</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stuttgart</field> </additional_fields> </entry> <entry id="24"> <name>BSA115-sigB-adaptation</name> <description>BSA115-sigB-adaptation</description> <cross_references /> <dates> <created>2009-11-16T17:12:54.000Z</created> <last_modified>2012-05-02T11:46:59.000Z</last_modified> <submission>2009-11-16T17:12:54.000Z</submission> <publication>2012-05-02T11:46:59.000Z</publication> </dates> <additional_fields> <field name="submitter">Ulf Liebal</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/24?version=1</field> <field name="ModelFormat">Matlab package</field> <field name="submitter_affiliation">University of Rostock</field> </additional_fields> </entry> <entry id="25"> <name>COPASI model of L. lactis glycolysis</name> <description>COPASI model of L. lactis glycolysis</description> <cross_references /> <dates> <created>2010-05-27T14:01:48.000Z</created> <last_modified>2018-11-27T15:22:34.000Z</last_modified> <submission>2010-05-27T14:01:48.000Z</submission> <publication>2018-11-27T15:22:34.000Z</publication> </dates> <additional_fields> <field name="submitter">Mark Musters</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/25?version=2</field> <field name="ModelFormat">Copasi</field> <field name="submitter_affiliation">Wageningen University & Research</field> </additional_fields> </entry> <entry id="26"> <name>SBML file of L. lactis glycolysis</name> <description>SBML file of L. lactis glycolysis</description> <cross_references /> <dates> <created>2009-11-23T13:31:53.000Z</created> <last_modified>2016-05-12T14:25:57.000Z</last_modified> <submission>2009-11-23T13:31:53.000Z</submission> <publication>2016-05-12T14:25:57.000Z</publication> </dates> <additional_fields> <field name="submitter">Mark Musters</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/26?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Wageningen University & Research</field> </additional_fields> </entry> <entry id="30"> <name>Preliminary overview of the effect of KCl stress on protein interaction networks involved in the regulation of the potassium transporter Trk1.</name> <description>Preliminary overview of the effect of KCl stress on protein interaction networks involved in the regulation of the potassium transporter Trk1.</description> <cross_references /> <dates> <created>2010-03-12T16:57:16.000Z</created> <last_modified>2010-03-12T16:57:16.000Z</last_modified> <submission>2010-03-12T16:57:16.000Z</submission> <publication>2010-03-12T16:57:16.000Z</publication> </dates> <additional_fields> <field name="submitter">None given (likely automatic harvesting)</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/30?version=1</field> <field name="ModelFormat" /> </additional_fields> </entry> <entry id="31"> <name>Transcription factor competition theoretical analysis</name> <description>Transcription factor competition theoretical analysis</description> <cross_references /> <dates> <created>2010-04-15T12:56:16.000Z</created> <last_modified>2014-05-28T07:36:51.000Z</last_modified> <submission>2010-04-15T12:56:16.000Z</submission> <publication>2014-05-28T07:36:51.000Z</publication> </dates> <additional_fields> <field name="submitter">Ulf Liebal</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/31?version=1</field> <field name="ModelFormat">Matlab package</field> <field name="submitter_affiliation">University of Rostock</field> </additional_fields> </entry> <entry id="33"> <name>Mathematical modelling of the sporulation-initiation network in Bacillus subtilis.</name> <description>Mathematical modelling of the sporulation-initiation network in Bacillus subtilis.</description> <cross_references /> <dates> <created>2010-06-04T13:35:49.000Z</created> <last_modified>2014-07-16T14:39:29.000Z</last_modified> <submission>2010-06-04T13:35:49.000Z</submission> <publication>2014-07-16T14:39:29.000Z</publication> </dates> <additional_fields> <field name="submitter">Sara Jabbari</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/33?version=1</field> <field name="ModelFormat">Matlab package</field> <field name="submitter_affiliation">University of Nottingham</field> </additional_fields> </entry> <entry id="34"> <name>bakker</name> <description>bakker</description> <cross_references /> <dates> <created>2010-10-07T12:49:17.000Z</created> <last_modified>2016-05-12T14:25:57.000Z</last_modified> <submission>2010-10-07T12:49:17.000Z</submission> <publication>2016-05-12T14:25:57.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/34?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="36"> <name>bakkerxml</name> <description>bakkerxml</description> <cross_references /> <dates> <created>2010-10-07T12:57:57.000Z</created> <last_modified>2016-05-12T14:25:57.000Z</last_modified> <submission>2010-10-07T12:57:57.000Z</submission> <publication>2016-05-12T14:25:57.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/36?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="38"> <name>ScoCyc 14.5 release bundle</name> <description>ScoCyc 14.5 release bundle</description> <cross_references /> <dates> <created>2010-11-15T14:43:50.000Z</created> <last_modified>2010-11-15T14:49:12.000Z</last_modified> <submission>2010-11-15T14:43:50.000Z</submission> <publication>2010-11-15T14:49:12.000Z</publication> </dates> <additional_fields> <field name="submitter">Jay Moore</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/38?version=2</field> <field name="ModelFormat">BioPAX</field> <field name="submitter_affiliation">University of Warwick</field> </additional_fields> </entry> <entry id="42"> <name>Dynamic shift model of the effect of pH upon solvent production by Clostridium acetobutylicum</name> <description>Dynamic shift model of the effect of pH upon solvent production by Clostridium acetobutylicum</description> <cross_references /> <dates> <created>2011-02-07T15:05:58.000Z</created> <last_modified>2011-02-07T18:00:02.000Z</last_modified> <submission>2011-02-07T15:05:58.000Z</submission> <publication>2011-02-07T18:00:02.000Z</publication> </dates> <additional_fields> <field name="submitter">None given (likely automatic harvesting)</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/42?version=1</field> <field name="ModelFormat">SBML</field> </additional_fields> </entry> <entry id="43"> <name>solventogenesis</name> <description>solventogenesis</description> <cross_references /> <dates> <created>2011-02-15T14:51:12.000Z</created> <last_modified>2016-05-12T14:25:57.000Z</last_modified> <submission>2011-02-15T14:51:12.000Z</submission> <publication>2016-05-12T14:25:57.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/43?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="44"> <name>haus1</name> <description>haus1</description> <cross_references /> <dates> <created>2011-02-15T14:58:11.000Z</created> <last_modified>2016-05-12T14:25:57.000Z</last_modified> <submission>2011-02-15T14:58:11.000Z</submission> <publication>2016-05-12T14:25:57.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/44?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="45"> <name>Kinetic model of Escherichia coli's electron transport chain (ETC) coupled to a simplified growth model</name> <description>Kinetic model of Escherichia coli's electron transport chain (ETC) coupled to a simplified growth model</description> <cross_references /> <dates> <created>2011-05-30T08:09:20.000Z</created> <last_modified>2011-05-30T08:09:20.000Z</last_modified> <submission>2011-05-30T08:09:20.000Z</submission> <publication>2011-05-30T08:09:20.000Z</publication> </dates> <additional_fields> <field name="submitter">Sebastian Henkel</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/45?version=2</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Stuttgart</field> </additional_fields> </entry> <entry id="46"> <name>BSA115 Post-transcriptional instability</name> <description>BSA115 Post-transcriptional instability</description> <cross_references /> <dates> <created>2011-03-30T12:16:41.000Z</created> <last_modified>2013-01-17T17:32:45.000Z</last_modified> <submission>2011-03-30T12:16:41.000Z</submission> <publication>2013-01-17T17:32:45.000Z</publication> </dates> <additional_fields> <field name="submitter">Ulf Liebal</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/46?version=14</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Rostock</field> </additional_fields> </entry> <entry id="47"> <name>Test2</name> <description>Test2</description> <cross_references /> <dates> <created>2011-03-08T11:04:05.000Z</created> <last_modified>2016-05-12T14:25:57.000Z</last_modified> <submission>2011-03-08T11:04:05.000Z</submission> <publication>2016-05-12T14:25:57.000Z</publication> </dates> <additional_fields> <field name="submitter">Malgorzata Adamczyk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/47?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">Warsaw University of Technology</field> </additional_fields> </entry> <entry id="48"> <name>BSA sigB-proteolysis model</name> <description>BSA sigB-proteolysis model</description> <cross_references /> <dates> <created>2011-03-30T12:15:08.000Z</created> <last_modified>2013-01-17T17:34:16.000Z</last_modified> <submission>2011-03-30T12:15:08.000Z</submission> <publication>2013-01-17T17:34:16.000Z</publication> </dates> <additional_fields> <field name="submitter">Ulf Liebal</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/48?version=2</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Rostock</field> </additional_fields> </entry> <entry id="49"> <name>BSA115-transcription inhibition model</name> <description>BSA115-transcription inhibition model</description> <cross_references /> <dates> <created>2011-03-30T12:31:40.000Z</created> <last_modified>2013-01-17T17:31:45.000Z</last_modified> <submission>2011-03-30T12:31:40.000Z</submission> <publication>2013-01-17T17:31:45.000Z</publication> </dates> <additional_fields> <field name="submitter">Ulf Liebal</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/49?version=3</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Rostock</field> </additional_fields> </entry> <entry id="50"> <name>BSA115-lacz-synth</name> <description>BSA115-lacz-synth</description> <cross_references /> <dates> <created>2011-04-04T14:37:17.000Z</created> <last_modified>2013-01-17T17:35:00.000Z</last_modified> <submission>2011-04-04T14:37:17.000Z</submission> <publication>2013-01-17T17:35:00.000Z</publication> </dates> <additional_fields> <field name="submitter">Ulf Liebal</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/50?version=2</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Rostock</field> </additional_fields> </entry> <entry id="51"> <name>e.coli-central-carbon_chassagnole-et-al</name> <description>e.coli-central-carbon_chassagnole-et-al</description> <cross_references /> <dates> <created>2011-04-05T08:04:33.000Z</created> <last_modified>2011-04-05T08:05:48.000Z</last_modified> <submission>2011-04-05T08:04:33.000Z</submission> <publication>2011-04-05T08:05:48.000Z</publication> </dates> <additional_fields> <field name="submitter">Ulf Liebal</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/51?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Rostock</field> </additional_fields> </entry> <entry id="55"> <name>Dynamic shift model of the effect of pH upon solvent production by Clostridium acetobutylicum - first experiment</name> <description>Dynamic shift model of the effect of pH upon solvent production by Clostridium acetobutylicum - first experiment</description> <cross_references /> <dates> <created>2011-10-12T09:30:58.000Z</created> <last_modified>2012-03-07T12:45:14.000Z</last_modified> <submission>2011-10-12T09:30:58.000Z</submission> <publication>2012-03-07T12:45:14.000Z</publication> </dates> <additional_fields> <field name="submitter">Franco du Preez</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/55?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> </additional_fields> </entry> <entry id="56"> <name>Dynamic shift model of the effect of pH upon solvent production by Clostridium acetobutylicum - second experiment</name> <description>Dynamic shift model of the effect of pH upon solvent production by Clostridium acetobutylicum - second experiment</description> <cross_references /> <dates> <created>2011-10-12T09:55:02.000Z</created> <last_modified>2012-03-07T12:46:33.000Z</last_modified> <submission>2011-10-12T09:55:02.000Z</submission> <publication>2012-03-07T12:46:33.000Z</publication> </dates> <additional_fields> <field name="submitter">Franco du Preez</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/56?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> </additional_fields> </entry> <entry id="57"> <name>Dynamic shift model of the effect of pH upon solvent production by Clostridium acetobutylicum - third experiment</name> <description>Dynamic shift model of the effect of pH upon solvent production by Clostridium acetobutylicum - third experiment</description> <cross_references /> <dates> <created>2011-10-12T10:05:18.000Z</created> <last_modified>2012-03-07T12:49:44.000Z</last_modified> <submission>2011-10-12T10:05:18.000Z</submission> <publication>2012-03-07T12:49:44.000Z</publication> </dates> <additional_fields> <field name="submitter">Franco du Preez</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/57?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> </additional_fields> </entry> <entry id="58"> <name>Dynamic shift model of the effect of pH upon solvent production by Clostridium acetobutylicum - fourth experiment</name> <description>Dynamic shift model of the effect of pH upon solvent production by Clostridium acetobutylicum - fourth experiment</description> <cross_references /> <dates> <created>2011-10-12T10:27:46.000Z</created> <last_modified>2012-03-07T12:48:27.000Z</last_modified> <submission>2011-10-12T10:27:46.000Z</submission> <publication>2012-03-07T12:48:27.000Z</publication> </dates> <additional_fields> <field name="submitter">Franco du Preez</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/58?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> </additional_fields> </entry> <entry id="59"> <name>Mathematical Modelling of the Sporulation-Initiation Network in Bacillus Subtilis Revealing the Dual Role of the Putative Quorum-Sensing Signal Molecule PhrA</name> <description>Mathematical Modelling of the Sporulation-Initiation Network in Bacillus Subtilis Revealing the Dual Role of the Putative Quorum-Sensing Signal Molecule PhrA</description> <cross_references /> <dates> <created>2011-10-12T11:56:26.000Z</created> <last_modified>2012-03-07T12:43:15.000Z</last_modified> <submission>2011-10-12T11:56:26.000Z</submission> <publication>2012-03-07T12:43:15.000Z</publication> </dates> <additional_fields> <field name="submitter">Franco du Preez</field> <field name="repository">FAIRDOMHub</field> <field 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(2012).</name> <description>Model of Trypanosoma brucei glycolysis as published in Achcar et al. (2012).</description> <cross_references /> <dates> <created>2012-02-16T09:53:38.000Z</created> <last_modified>2012-02-16T09:53:38.000Z</last_modified> <submission>2012-02-16T09:53:38.000Z</submission> <publication>2012-02-16T09:53:38.000Z</publication> </dates> <additional_fields> <field name="submitter">Fiona Achcar</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/62?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Glasgow</field> </additional_fields> </entry> <entry id="63"> <name>Model of trypanosomal glycolysis extended with the pentose phosphate pathway (m5) - non-final.</name> <description>Model of trypanosomal glycolysis extended with the pentose phosphate pathway (m5) - non-final.</description> <cross_references /> <dates> <created>2012-02-24T11:08:24.000Z</created> <last_modified>2012-02-24T11:31:05.000Z</last_modified> <submission>2012-02-24T11:08:24.000Z</submission> <publication>2012-02-24T11:31:05.000Z</publication> </dates> <additional_fields> <field name="submitter">Eduard Kerkhoven</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/63?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Glasgow</field> <field name="submitter_affiliation">Chalmers University of Technology</field> </additional_fields> </entry> <entry id="64"> <name>Model of trypanosomal glycolysis extended with the pentose phosphate pathway (m6) - non-final.</name> <description>Model of trypanosomal glycolysis extended with the pentose phosphate pathway (m6) - non-final.</description> <cross_references /> <dates> <created>2012-02-24T11:36:19.000Z</created> <last_modified>2012-02-24T11:44:26.000Z</last_modified> <submission>2012-02-24T11:36:19.000Z</submission> <publication>2012-02-24T11:44:26.000Z</publication> </dates> <additional_fields> <field name="submitter">Eduard Kerkhoven</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/64?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Glasgow</field> <field name="submitter_affiliation">Chalmers University of Technology</field> </additional_fields> </entry> <entry id="65"> <name>Stressosome-dynamics</name> <description>Stressosome-dynamics</description> <cross_references /> <dates> <created>2012-03-16T12:34:32.000Z</created> <last_modified>2012-03-16T12:37:12.000Z</last_modified> <submission>2012-03-16T12:34:32.000Z</submission> <publication>2012-03-16T12:37:12.000Z</publication> </dates> <additional_fields> <field name="submitter">Ulf Liebal</field> <field 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package</field> <field name="submitter_affiliation">University of Rostock</field> </additional_fields> </entry> <entry id="69"> <name>Published kinetic model of glycolysis in L. lactis</name> <description>Published kinetic model of glycolysis in L. lactis</description> <cross_references /> <dates> <created>2012-04-02T09:03:27.000Z</created> <last_modified>2012-04-04T14:47:53.000Z</last_modified> <submission>2012-04-02T09:03:27.000Z</submission> <publication>2012-04-04T14:47:53.000Z</publication> </dates> <additional_fields> <field name="submitter">Jennifer Levering</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/69?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Heidelberg</field> </additional_fields> </entry> <entry id="70"> <name>Published kinetic model of glycolysis in S. pyogenes</name> <description>Published kinetic model of glycolysis in S. pyogenes</description> <cross_references /> <dates> <created>2012-04-02T09:07:20.000Z</created> <last_modified>2012-04-04T14:50:02.000Z</last_modified> <submission>2012-04-02T09:07:20.000Z</submission> <publication>2012-04-04T14:50:02.000Z</publication> </dates> <additional_fields> <field name="submitter">Jennifer Levering</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/70?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Heidelberg</field> </additional_fields> </entry> <entry id="71"> <name>Genome-scale model of Streptococcus pyogenes</name> <description>Genome-scale model of Streptococcus pyogenes</description> <cross_references /> <dates> <created>2012-04-04T15:07:49.000Z</created> <last_modified>2016-05-12T14:25:57.000Z</last_modified> <submission>2012-04-04T15:07:49.000Z</submission> <publication>2016-05-12T14:25:57.000Z</publication> </dates> <additional_fields> <field name="submitter">Jennifer Levering</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/71?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Heidelberg</field> </additional_fields> </entry> <entry id="72"> <name>Script for the calculation of theoretical coil length</name> <description>Script for the calculation of theoretical coil length</description> <cross_references /> <dates> <created>2012-04-26T11:27:06.000Z</created> <last_modified>2012-04-26T11:27:06.000Z</last_modified> <submission>2012-04-26T11:27:06.000Z</submission> <publication>2012-04-26T11:27:06.000Z</publication> </dates> <additional_fields> <field name="submitter">Sebastian Curth</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field 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Biology, University of Manchester</field> </additional_fields> </entry> <entry id="75"> <name>Detailed kinetic model of yeast glycolytic oscillation - II</name> <description>Detailed kinetic model of yeast glycolytic oscillation - II</description> <cross_references /> <dates> <created>2012-07-23T18:48:02.000Z</created> <last_modified>2012-07-23T23:27:00.000Z</last_modified> <submission>2012-07-23T18:48:02.000Z</submission> <publication>2012-07-23T23:27:00.000Z</publication> </dates> <additional_fields> <field name="submitter">Franco du Preez</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/75?version=3</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> </additional_fields> </entry> <entry id="76"> <name>Detailed kinetic model of yeast glycolytic oscillation - III</name> <description>Detailed kinetic model of yeast glycolytic oscillation - III</description> <cross_references /> <dates> <created>2012-07-23T19:24:39.000Z</created> <last_modified>2012-07-23T23:23:45.000Z</last_modified> <submission>2012-07-23T19:24:39.000Z</submission> <publication>2012-07-23T23:23:45.000Z</publication> </dates> <additional_fields> <field name="submitter">Franco du Preez</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/76?version=2</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> </additional_fields> </entry> <entry id="77"> <name>Detailed kinetic model of yeast glycolytic oscillation - IV</name> <description>Detailed kinetic model of yeast glycolytic oscillation - IV</description> <cross_references /> <dates> <created>2012-07-23T19:30:57.000Z</created> <last_modified>2012-07-23T23:22:59.000Z</last_modified> <submission>2012-07-23T19:30:57.000Z</submission> <publication>2012-07-23T23:22:59.000Z</publication> </dates> <additional_fields> <field name="submitter">Franco du Preez</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/77?version=2</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> </additional_fields> </entry> <entry id="78"> <name>Detailed kinetic model of yeast glycolytic oscillation - V</name> <description>Detailed kinetic model of yeast glycolytic oscillation - V</description> <cross_references /> <dates> <created>2012-07-23T19:38:04.000Z</created> <last_modified>2012-07-23T23:19:36.000Z</last_modified> <submission>2012-07-23T19:38:04.000Z</submission> <publication>2012-07-23T23:19:36.000Z</publication> </dates> <additional_fields> <field name="submitter">Franco du Preez</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/78?version=2</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> </additional_fields> </entry> <entry id="79"> <name>Detailed kinetic model of yeast glycolytic oscillation - VI</name> <description>Detailed kinetic model of yeast glycolytic oscillation - VI</description> <cross_references /> <dates> <created>2012-07-23T19:44:29.000Z</created> <last_modified>2012-07-23T23:18:10.000Z</last_modified> <submission>2012-07-23T19:44:29.000Z</submission> <publication>2012-07-23T23:18:10.000Z</publication> </dates> <additional_fields> <field name="submitter">Franco du Preez</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field 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Integrative Systems Biology, University of Manchester</field> </additional_fields> </entry> <entry id="81"> <name>Sustained glycolytic oscillations in individual isolated yeast cells - IV</name> <description>Sustained glycolytic oscillations in individual isolated yeast cells - IV</description> <cross_references /> <dates> <created>2012-07-23T21:17:03.000Z</created> <last_modified>2012-10-23T11:42:46.000Z</last_modified> <submission>2012-07-23T21:17:03.000Z</submission> <publication>2012-10-23T11:42:46.000Z</publication> </dates> <additional_fields> <field name="submitter">Franco du Preez</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/81?version=6</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> </additional_fields> </entry> <entry id="82"> <name>Sustained glycolytic oscillations in individual isolated yeast cells - III</name> <description>Sustained glycolytic oscillations in individual isolated yeast cells - III</description> <cross_references /> <dates> <created>2012-07-23T21:24:05.000Z</created> <last_modified>2012-07-23T23:49:27.000Z</last_modified> <submission>2012-07-23T21:24:05.000Z</submission> <publication>2012-07-23T23:49:27.000Z</publication> </dates> <additional_fields> <field name="submitter">Franco du Preez</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/82?version=3</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> </additional_fields> </entry> <entry id="83"> <name>Sustained glycolytic oscillations in individual isolated yeast cells - II</name> <description>Sustained glycolytic oscillations in individual isolated yeast cells - II</description> <cross_references /> <dates> <created>2012-07-23T21:34:53.000Z</created> <last_modified>2012-07-23T23:51:32.000Z</last_modified> <submission>2012-07-23T21:34:53.000Z</submission> <publication>2012-07-23T23:51:32.000Z</publication> </dates> <additional_fields> <field name="submitter">Franco du Preez</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/83?version=5</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> </additional_fields> </entry> <entry id="84"> <name>Sustained glycolytic oscillations in individual isolated yeast cells - I</name> <description>Sustained glycolytic oscillations in individual isolated yeast cells - I</description> <cross_references /> <dates> <created>2012-07-23T21:39:18.000Z</created> <last_modified>2012-07-23T23:53:42.000Z</last_modified> <submission>2012-07-23T21:39:18.000Z</submission> <publication>2012-07-23T23:53:42.000Z</publication> </dates> <additional_fields> <field name="submitter">Franco du Preez</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/84?version=3</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> </additional_fields> </entry> <entry id="85"> <name>SBML model of yeast central carbon metabolism</name> <description>SBML model of yeast central carbon metabolism</description> <cross_references /> <dates> <created>2012-10-16T13:23:52.000Z</created> <last_modified>2012-10-16T13:26:59.000Z</last_modified> <submission>2012-10-16T13:23:52.000Z</submission> <publication>2012-10-16T13:26:59.000Z</publication> </dates> <additional_fields> <field 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<field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/88?version=1</field> <field name="ModelFormat">Matlab package</field> <field name="submitter_affiliation">University of Rostock</field> </additional_fields> </entry> <entry id="89"> <name>Draft model of Glycolysis in T. brucei incorporating transcription and translation of the enzymes</name> <description>Draft model of Glycolysis in T. brucei incorporating transcription and translation of the enzymes</description> <cross_references /> <dates> <created>2012-12-13T13:51:01.000Z</created> <last_modified>2012-12-13T13:55:26.000Z</last_modified> <submission>2012-12-13T13:51:01.000Z</submission> <publication>2012-12-13T13:55:26.000Z</publication> </dates> <additional_fields> <field name="submitter">Fiona Achcar</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field 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model of oxygen diffusion near E. coli cells</name> <description>Compartimented ODE model of oxygen diffusion near E. coli cells</description> <cross_references /> <dates> <created>2013-01-29T10:08:18.000Z</created> <last_modified>2013-01-29T10:08:19.000Z</last_modified> <submission>2013-01-29T10:08:18.000Z</submission> <publication>2013-01-29T10:08:19.000Z</publication> </dates> <additional_fields> <field name="submitter">David Knies</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/91?version=3</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Stuttgart</field> </additional_fields> </entry> <entry id="92"> <name>PDE model of oxygen diffusion near E. coli cells</name> <description>PDE model of oxygen diffusion near E. coli cells</description> <cross_references /> <dates> <created>2013-01-29T10:03:48.000Z</created> <last_modified>2013-01-29T10:03:49.000Z</last_modified> <submission>2013-01-29T10:03:48.000Z</submission> <publication>2013-01-29T10:03:49.000Z</publication> </dates> <additional_fields> <field name="submitter">David Knies</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/92?version=2</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stuttgart</field> </additional_fields> </entry> <entry id="96"> <name>L lactis kinetic model</name> <description>L lactis kinetic model</description> <cross_references /> <dates> <created>2013-01-03T17:06:11.000Z</created> <last_modified>2016-05-12T14:25:57.000Z</last_modified> <submission>2013-01-03T17:06:11.000Z</submission> <publication>2016-05-12T14:25:57.000Z</publication> </dates> <additional_fields> <field name="submitter">domenico bellomo</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/96?version=1</field> <field name="ModelFormat">Matlab package</field> <field name="submitter_affiliation">VU University Amsterdam</field> </additional_fields> </entry> <entry id="98"> <name>Parameter estimation for a function describing the changing pH level during the pH-induced metabolic shift</name> <description>Parameter estimation for a function describing the changing pH level during the pH-induced metabolic shift</description> <cross_references /> <dates> <created>2013-01-05T17:23:24.000Z</created> <last_modified>2013-01-05T17:23:24.000Z</last_modified> <submission>2013-01-05T17:23:24.000Z</submission> <publication>2013-01-05T17:23:24.000Z</publication> </dates> <additional_fields> <field name="submitter">Thomas Millat</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/98?version=1</field> <field name="ModelFormat">Matlab package</field> <field name="submitter_affiliation">University of Rostock</field> </additional_fields> </entry> <entry id="99"> <name>Estimation of an acidogenic and solventogenic population from optical density data observed in 'forward'-shift experiments using continuous cultures of C. acetobutylicum</name> <description>Estimation of an acidogenic and solventogenic population from optical density data observed in 'forward'-shift experiments using continuous cultures of C. acetobutylicum</description> <cross_references /> <dates> <created>2013-01-05T18:35:00.000Z</created> <last_modified>2014-06-11T13:03:11.000Z</last_modified> <submission>2013-01-05T18:35:00.000Z</submission> <publication>2014-06-11T13:03:11.000Z</publication> </dates> <additional_fields> <field name="submitter">Thomas Millat</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/99?version=1</field> <field name="ModelFormat">Matlab package</field> <field name="submitter_affiliation">University of Rostock</field> </additional_fields> </entry> <entry id="100"> <name>Model of the pH-induced metabolic shift in phosphate-limited continuous cultures of C. acetobutylicum assuming a phenotypic switch</name> <description>Model of the pH-induced metabolic shift in phosphate-limited continuous cultures of C. acetobutylicum assuming a phenotypic switch</description> <cross_references /> <dates> <created>2013-01-06T15:20:12.000Z</created> <last_modified>2013-01-06T16:25:15.000Z</last_modified> <submission>2013-01-06T15:20:12.000Z</submission> <publication>2013-01-06T16:25:15.000Z</publication> </dates> <additional_fields> <field name="submitter">Thomas Millat</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/100?version=1</field> <field name="ModelFormat">Matlab package</field> <field name="submitter_affiliation">University of Rostock</field> </additional_fields> </entry> <entry id="101"> <name>LAB with ATP-driven glucose import of yeast</name> <description>LAB with ATP-driven glucose import of yeast</description> <cross_references /> <dates> <created>2013-01-09T14:20:33.000Z</created> <last_modified>2016-05-12T14:25:57.000Z</last_modified> <submission>2013-01-09T14:20:33.000Z</submission> <publication>2016-05-12T14:25:57.000Z</publication> </dates> <additional_fields> <field name="submitter">Ettore Murabito</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/101?version=1</field> <field name="ModelFormat">Copasi</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> </additional_fields> </entry> <entry id="102"> <name>TFInfer: a tool for probabilistic inference of transcription factor activities</name> <description>TFInfer: a tool for probabilistic inference of transcription factor activities</description> <cross_references /> <dates> <created>2013-01-14T17:10:02.000Z</created> <last_modified>2013-01-14T17:10:02.000Z</last_modified> <submission>2013-01-14T17:10:02.000Z</submission> <publication>2013-01-14T17:10:02.000Z</publication> </dates> <additional_fields> <field name="submitter">Guido Sanguinetti</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/102?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="105"> <name>Agent-based model of response of E.coli to different levels of oxygen supply (with FNR and ArcBA)</name> <description>Agent-based model of response of E.coli to different levels of oxygen supply (with FNR and ArcBA)</description> <cross_references /> <dates> <created>2013-01-23T12:08:15.000Z</created> <last_modified>2013-01-28T10:38:18.000Z</last_modified> <submission>2013-01-23T12:08:15.000Z</submission> <publication>2013-01-28T10:38:18.000Z</publication> </dates> <additional_fields> <field name="submitter">Hao Bai</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/105?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">University of Sheffield</field> </additional_fields> </entry> <entry id="106"> <name>TFinfer2</name> <description>TFinfer2</description> <cross_references /> <dates> <created>2013-01-25T11:13:28.000Z</created> <last_modified>2013-01-28T15:30:00.000Z</last_modified> <submission>2013-01-25T11:13:28.000Z</submission> <publication>2013-01-28T15:30:00.000Z</publication> </dates> <additional_fields> <field name="submitter">Botond Cseke</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/106?version=1</field> <field name="ModelFormat">Matlab package</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="107"> <name>Models of glycolysis in T. brucei with different levels of permeability of the glycosomes, and with or without cytosolic activities of the glycolytic enzymes.</name> <description>Models of glycolysis in T. brucei with different levels of permeability of the glycosomes, and with or without cytosolic activities of the glycolytic enzymes.</description> <cross_references /> <dates> <created>2013-04-03T16:05:47.000Z</created> <last_modified>2013-05-16T14:56:11.000Z</last_modified> <submission>2013-04-03T16:05:47.000Z</submission> <publication>2013-05-16T14:56:11.000Z</publication> </dates> <additional_fields> <field name="submitter">Fiona Achcar</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/107?version=2</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Glasgow</field> </additional_fields> </entry> <entry id="108"> <name>Final model of TryS</name> <description>Final model of TryS</description> <cross_references /> <dates> <created>2013-06-18T08:53:14.000Z</created> <last_modified>2014-07-31T10:13:36.000Z</last_modified> <submission>2013-06-18T08:53:14.000Z</submission> <publication>2014-07-31T10:13:36.000Z</publication> </dates> <additional_fields> <field name="submitter">Jurgen Haanstra</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/108?version=2</field> <field name="ModelFormat">Copasi</field> <field name="submitter_affiliation">University of Groningen</field> <field name="submitter_affiliation">VU University Amsterdam</field> </additional_fields> </entry> <entry id="110"> <name>PGK Kinetic Model</name> <description>PGK Kinetic Model</description> <cross_references /> <dates> <created>2013-08-01T09:49:55.000Z</created> <last_modified>2013-08-01T09:49:55.000Z</last_modified> <submission>2013-08-01T09:49:55.000Z</submission> <publication>2013-08-01T09:49:55.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/110?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="111"> <name>Model of reconstituted gluconeogenesis system in S. solfataricus</name> <description>Model of reconstituted gluconeogenesis system in S. solfataricus</description> <cross_references /> <dates> <created>2013-08-01T12:45:08.000Z</created> <last_modified>2013-09-18T15:46:54.000Z</last_modified> <submission>2013-08-01T12:45:08.000Z</submission> <publication>2013-09-18T15:46:54.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/111?version=2</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="112"> <name>FBPAase Kinetic Model</name> <description>FBPAase Kinetic Model</description> <cross_references /> <dates> <created>2013-08-01T14:32:55.000Z</created> <last_modified>2013-08-01T14:32:55.000Z</last_modified> <submission>2013-08-01T14:32:55.000Z</submission> <publication>2013-08-01T14:32:55.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/112?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="113"> <name>GAPDH Kinetic Model</name> <description>GAPDH Kinetic Model</description> <cross_references /> <dates> <created>2013-08-01T14:47:32.000Z</created> <last_modified>2013-08-01T14:47:32.000Z</last_modified> <submission>2013-08-01T14:47:32.000Z</submission> <publication>2013-08-01T14:47:32.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/113?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="114"> <name>TPI Kinetic Model</name> <description>TPI Kinetic Model</description> <cross_references /> <dates> <created>2013-08-01T14:54:15.000Z</created> <last_modified>2013-08-01T14:54:15.000Z</last_modified> <submission>2013-08-01T14:54:15.000Z</submission> <publication>2013-08-01T14:54:15.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/114?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="115"> <name>Kinetic Model of Temperature Degradation of Gluconeogenic Intermediates</name> <description>Kinetic Model of Temperature Degradation of Gluconeogenic Intermediates</description> <cross_references /> <dates> <created>2013-08-01T15:05:02.000Z</created> <last_modified>2013-08-01T15:05:02.000Z</last_modified> <submission>2013-08-01T15:05:02.000Z</submission> <publication>2013-08-01T15:05:02.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/115?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="116"> <name>PYK structural models</name> <description>PYK structural models</description> <cross_references /> <dates> <created>2014-01-31T08:58:51.000Z</created> <last_modified>2014-01-31T08:58:51.000Z</last_modified> <submission>2014-01-31T08:58:51.000Z</submission> <publication>2014-01-31T08:58:51.000Z</publication> </dates> <additional_fields> <field name="submitter">Nadine Veith</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/116?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">University of Heidelberg</field> </additional_fields> </entry> <entry id="118"> <name>Part 1: Comparative modeling of 3D structures of LDH enzymes</name> <description>Part 1: Comparative modeling of 3D structures of LDH enzymes</description> <cross_references /> <dates> <created>2014-04-22T12:58:10.000Z</created> <last_modified>2014-06-10T12:49:04.000Z</last_modified> <submission>2014-04-22T12:58:10.000Z</submission> <publication>2014-06-10T12:49:04.000Z</publication> </dates> <additional_fields> <field name="submitter">Anna Feldman-Salit</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/118?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Heidelberg Institute for Theoretical Studies (HITS gGmbH)</field> <field name="submitter_affiliation">University of Heidelberg</field> </additional_fields> </entry> <entry id="119"> <name>Part 3: Comparison of electrostatic potentials for FBP binding</name> <description>Part 3: Comparison of electrostatic potentials for FBP binding</description> <cross_references /> <dates> <created>2014-04-22T13:05:41.000Z</created> <last_modified>2014-06-10T12:49:04.000Z</last_modified> <submission>2014-04-22T13:05:41.000Z</submission> <publication>2014-06-10T12:49:04.000Z</publication> </dates> <additional_fields> <field name="submitter">Anna Feldman-Salit</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/119?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Heidelberg Institute for Theoretical Studies (HITS gGmbH)</field> <field name="submitter_affiliation">University of Heidelberg</field> </additional_fields> </entry> <entry id="120"> <name>Part 2: Computation of electrostatic potentials for 4 LDH enzymes</name> <description>Part 2: Computation of electrostatic potentials for 4 LDH enzymes</description> <cross_references /> <dates> <created>2014-04-22T13:16:33.000Z</created> <last_modified>2014-06-10T12:49:04.000Z</last_modified> <submission>2014-04-22T13:16:33.000Z</submission> <publication>2014-06-10T12:49:04.000Z</publication> </dates> <additional_fields> <field name="submitter">Anna Feldman-Salit</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/120?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Heidelberg Institute for Theoretical Studies (HITS gGmbH)</field> <field name="submitter_affiliation">University of Heidelberg</field> </additional_fields> </entry> <entry id="121"> <name>Part 4: Activation / Inhibition Effect on LDHs function in the presence of Phosphate ions</name> <description>Part 4: Activation / Inhibition Effect on LDHs function in the presence of Phosphate ions</description> <cross_references /> <dates> <created>2014-05-07T13:21:07.000Z</created> <last_modified>2014-06-10T12:49:04.000Z</last_modified> <submission>2014-05-07T13:21:07.000Z</submission> <publication>2014-06-10T12:49:04.000Z</publication> </dates> <additional_fields> <field name="submitter">Anna Feldman-Salit</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/121?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Heidelberg Institute for Theoretical Studies (HITS gGmbH)</field> <field name="submitter_affiliation">University of Heidelberg</field> </additional_fields> </entry> <entry id="122"> <name>Part 5: Algorithm to computationally estimate the effect of Pi for 4 LDH enzymes</name> <description>Part 5: Algorithm to computationally estimate the effect of Pi for 4 LDH enzymes</description> <cross_references /> <dates> <created>2014-06-10T12:19:41.000Z</created> <last_modified>2014-06-10T12:49:04.000Z</last_modified> <submission>2014-06-10T12:19:41.000Z</submission> <publication>2014-06-10T12:49:04.000Z</publication> </dates> <additional_fields> <field name="submitter">Anna Feldman-Salit</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/122?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Heidelberg Institute for Theoretical Studies (HITS gGmbH)</field> <field name="submitter_affiliation">University of Heidelberg</field> </additional_fields> </entry> <entry id="124"> <name>HK Kinetic model</name> <description>HK Kinetic model</description> <cross_references /> <dates> <created>2014-08-08T13:38:00.000Z</created> <last_modified>2014-12-10T14:07:05.000Z</last_modified> <submission>2014-08-08T13:38:00.000Z</submission> <publication>2014-12-10T14:07:05.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/124?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="126"> <name>PGI Kinetic model</name> <description>PGI Kinetic model</description> <cross_references /> <dates> <created>2014-08-11T06:41:17.000Z</created> <last_modified>2015-03-03T07:24:25.000Z</last_modified> <submission>2014-08-11T06:41:17.000Z</submission> <publication>2015-03-03T07:24:25.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/126?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="127"> <name>PFK Kinetic model</name> <description>PFK Kinetic model</description> <cross_references /> <dates> <created>2014-08-11T06:43:04.000Z</created> <last_modified>2015-03-03T07:22:45.000Z</last_modified> <submission>2014-08-11T06:43:04.000Z</submission> <publication>2015-03-03T07:22:45.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/127?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="128"> <name>ALD Kinetic model</name> <description>ALD Kinetic model</description> <cross_references /> <dates> <created>2014-08-11T06:44:27.000Z</created> <last_modified>2015-03-03T09:47:38.000Z</last_modified> <submission>2014-08-11T06:44:27.000Z</submission> <publication>2015-03-03T09:47:38.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/128?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="129"> <name>TPI Kinetic model</name> <description>TPI Kinetic model</description> <cross_references /> <dates> <created>2014-08-11T06:45:58.000Z</created> <last_modified>2015-03-03T07:23:34.000Z</last_modified> <submission>2014-08-11T06:45:58.000Z</submission> <publication>2015-03-03T07:23:34.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/129?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="130"> <name>G3PDH Kinetic model</name> <description>G3PDH Kinetic model</description> <cross_references /> <dates> <created>2014-08-11T06:47:16.000Z</created> <last_modified>2015-03-03T09:48:13.000Z</last_modified> <submission>2014-08-11T06:47:16.000Z</submission> <publication>2015-03-03T09:48:13.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/130?version=2</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="131"> <name>GAPDH Kinetic model</name> <description>GAPDH Kinetic model</description> <cross_references /> <dates> <created>2014-08-11T06:48:44.000Z</created> <last_modified>2015-03-03T07:24:57.000Z</last_modified> <submission>2014-08-11T06:48:44.000Z</submission> <publication>2015-03-03T07:24:57.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/131?version=2</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="132"> <name>PGK Kinetic model</name> <description>PGK Kinetic model</description> <cross_references /> <dates> <created>2014-08-11T07:03:34.000Z</created> <last_modified>2015-03-03T07:15:04.000Z</last_modified> <submission>2014-08-11T07:03:34.000Z</submission> <publication>2015-03-03T07:15:04.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/132?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="133"> <name>PGM Kinetic model</name> <description>PGM Kinetic model</description> <cross_references /> <dates> <created>2014-08-11T07:18:27.000Z</created> <last_modified>2015-03-02T18:42:09.000Z</last_modified> <submission>2014-08-11T07:18:27.000Z</submission> <publication>2015-03-02T18:42:09.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/133?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="134"> <name>PK Kinetic model</name> <description>PK Kinetic model</description> <cross_references /> <dates> <created>2014-08-11T07:19:49.000Z</created> <last_modified>2015-03-03T07:12:38.000Z</last_modified> <submission>2014-08-11T07:19:49.000Z</submission> <publication>2015-03-03T07:12:38.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/134?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="135"> <name>LDH Kinetic model</name> <description>LDH Kinetic model</description> <cross_references /> <dates> <created>2014-08-11T07:21:54.000Z</created> <last_modified>2015-03-03T07:23:59.000Z</last_modified> <submission>2014-08-11T07:21:54.000Z</submission> <publication>2015-03-03T07:23:59.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/135?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="136"> <name>ENO Kinetic model</name> <description>ENO Kinetic model</description> <cross_references /> <dates> <created>2014-08-11T07:23:01.000Z</created> <last_modified>2015-03-03T07:28:06.000Z</last_modified> <submission>2014-08-11T07:23:01.000Z</submission> <publication>2015-03-03T07:28:06.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/136?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="138"> <name>Kinetic model for incubation (penkler2)</name> <description>Kinetic model for incubation (penkler2)</description> <cross_references /> <dates> <created>2014-08-11T07:58:20.000Z</created> <last_modified>2015-07-01T08:19:56.000Z</last_modified> <submission>2014-08-11T07:58:20.000Z</submission> <publication>2015-07-01T08:19:56.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/138?version=7</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="139"> <name>GLCtr Kinetic model</name> <description>GLCtr Kinetic model</description> <cross_references /> <dates> <created>2014-08-11T09:12:46.000Z</created> <last_modified>2015-09-08T11:29:40.000Z</last_modified> <submission>2014-08-11T09:12:46.000Z</submission> <publication>2015-09-08T11:29:40.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/139?version=2</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="140"> <name>GLYtr Kinetic model</name> <description>GLYtr Kinetic model</description> <cross_references /> <dates> <created>2014-08-11T10:24:32.000Z</created> <last_modified>2015-03-03T07:26:57.000Z</last_modified> <submission>2014-08-11T10:24:32.000Z</submission> <publication>2015-03-03T07:26:57.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/140?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="141"> <name>PYRtr Kinetic model</name> <description>PYRtr Kinetic model</description> <cross_references /> <dates> <created>2014-08-11T10:25:36.000Z</created> <last_modified>2015-03-03T07:21:17.000Z</last_modified> <submission>2014-08-11T10:25:36.000Z</submission> <publication>2015-03-03T07:21:17.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/141?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="142"> <name>LACtr Kinetic model</name> <description>LACtr Kinetic model</description> <cross_references /> <dates> <created>2014-08-11T10:26:40.000Z</created> <last_modified>2015-03-03T07:27:42.000Z</last_modified> <submission>2014-08-11T10:26:40.000Z</submission> <publication>2015-03-03T07:27:42.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/142?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="143"> <name>ATPASE Kinetic model</name> <description>ATPASE Kinetic model</description> <cross_references /> <dates> <created>2014-08-11T10:28:01.000Z</created> <last_modified>2015-03-03T07:28:45.000Z</last_modified> <submission>2014-08-11T10:28:01.000Z</submission> <publication>2015-03-03T07:28:45.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/143?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="144"> <name>Kinetic model for steady state (penkler1)</name> <description>Kinetic model for steady state (penkler1)</description> <cross_references /> <dates> <created>2014-08-27T11:43:17.000Z</created> <last_modified>2015-09-15T09:31:01.000Z</last_modified> <submission>2014-08-27T11:43:17.000Z</submission> <publication>2015-09-15T09:31:01.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/144?version=8</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="159"> <name>iNS142 RobOKoD Redesigned Butanol Producing.</name> <description>iNS142 RobOKoD Redesigned Butanol Producing.</description> <cross_references /> <dates> <created>2015-06-03T11:44:59.000Z</created> <last_modified>2018-08-31T13:58:22.000Z</last_modified> <submission>2015-06-03T11:44:59.000Z</submission> <publication>2018-08-31T13:58:22.000Z</publication> </dates> <additional_fields> <field name="submitter">Natalie Stanford</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/159?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> </additional_fields> </entry> <entry id="160"> <name>E.coli Core Model with Beta Oxidation Cycle.</name> <description>E.coli Core Model with Beta Oxidation Cycle.</description> <cross_references /> <dates> <created>2015-06-03T11:55:57.000Z</created> <last_modified>2016-06-02T14:44:01.000Z</last_modified> <submission>2015-06-03T11:55:57.000Z</submission> <publication>2016-06-02T14:44:01.000Z</publication> </dates> <additional_fields> <field name="submitter">Natalie Stanford</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/160?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> </additional_fields> </entry> <entry id="175"> <name>Kinetic model incorporating glucose transport inhibition (vanniekerk1)</name> <description>Kinetic model incorporating glucose transport inhibition (vanniekerk1)</description> <cross_references /> <dates> <created>2015-07-02T10:16:41.000Z</created> <last_modified>2015-11-23T13:09:37.000Z</last_modified> <submission>2015-07-02T10:16:41.000Z</submission> <publication>2015-11-23T13:09:37.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/175?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="176"> <name>GLCtr kinetic model incorporating inhibition</name> <description>GLCtr kinetic model incorporating inhibition</description> <cross_references /> <dates> <created>2015-07-02T10:21:37.000Z</created> <last_modified>2015-11-23T13:09:37.000Z</last_modified> <submission>2015-07-02T10:21:37.000Z</submission> <publication>2015-11-23T13:09:37.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/176?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="177"> <name>Validation of lactate flux inhibition by glucose transport inhibitor</name> <description>Validation of lactate flux inhibition by glucose transport inhibitor</description> <cross_references /> <dates> <created>2015-07-02T10:40:35.000Z</created> <last_modified>2015-11-23T13:09:37.000Z</last_modified> <submission>2015-07-02T10:40:35.000Z</submission> <publication>2015-11-23T13:09:37.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/177?version=2</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="179"> <name>Supply demand analysis on penkler1 model</name> <description>Supply demand analysis on penkler1 model</description> <cross_references /> <dates> <created>2015-07-10T10:30:42.000Z</created> <last_modified>2015-11-23T13:09:37.000Z</last_modified> <submission>2015-07-10T10:30:42.000Z</submission> <publication>2015-11-23T13:09:37.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/179?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="180"> <name>Genome-scale metabolic model of Enterococcus faecalis V583</name> <description>Genome-scale metabolic model of Enterococcus faecalis V583</description> <cross_references /> <dates> <created>2015-10-01T07:40:09.000Z</created> <last_modified>2015-10-01T07:41:26.000Z</last_modified> <submission>2015-10-01T07:40:09.000Z</submission> <publication>2015-10-01T07:41:26.000Z</publication> </dates> <additional_fields> <field name="submitter">Nadine Veith</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/180?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Heidelberg</field> </additional_fields> </entry> <entry id="185"> <name>JAK2/STAT5 model</name> <description>JAK2/STAT5 model</description> <cross_references /> <dates> <created>2016-03-03T09:47:42.000Z</created> <last_modified>2016-03-03T10:06:53.000Z</last_modified> <submission>2016-03-03T09:47:42.000Z</submission> <publication>2016-03-03T10:06:53.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/185?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="186"> <name>ZucAt: multi-compartment metabolic model of growing Arabidopsis thaliana</name> <description>ZucAt: multi-compartment metabolic model of growing Arabidopsis thaliana</description> <cross_references /> <dates> <created>2016-04-16T19:58:00.000Z</created> <last_modified>2016-06-04T21:27:49.000Z</last_modified> <submission>2016-04-16T19:58:00.000Z</submission> <publication>2016-06-04T21:27:49.000Z</publication> </dates> <additional_fields> <field name="submitter">Maksim Zakhartsev</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/186?version=2</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Stuttgart</field> <field name="submitter_affiliation">University of Hohenheim</field> <field name="submitter_affiliation">Norwegian University of Life Sciences</field> <field name="submitter_affiliation">Norwegian University of Science and Technology</field> </additional_fields> </entry> <entry id="187"> <name>NR model 1</name> <description>NR model 1</description> <cross_references /> <dates> <created>2016-05-17T12:25:05.000Z</created> <last_modified>2016-05-17T12:25:05.000Z</last_modified> <submission>2016-05-17T12:25:05.000Z</submission> <publication>2016-05-17T12:25:05.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/187?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="188"> <name>NR model 2</name> <description>NR model 2</description> <cross_references /> <dates> <created>2016-05-17T12:26:35.000Z</created> <last_modified>2016-05-17T12:26:35.000Z</last_modified> <submission>2016-05-17T12:26:35.000Z</submission> <publication>2016-05-17T12:26:35.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/188?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="189"> <name>NR model 3</name> <description>NR model 3</description> <cross_references /> <dates> <created>2016-05-17T12:27:50.000Z</created> <last_modified>2016-05-17T12:27:50.000Z</last_modified> <submission>2016-05-17T12:27:50.000Z</submission> <publication>2016-05-17T12:27:50.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/189?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="190"> <name>NR model 4</name> <description>NR model 4</description> <cross_references /> <dates> <created>2016-05-17T12:28:50.000Z</created> <last_modified>2016-05-17T12:28:50.000Z</last_modified> <submission>2016-05-17T12:28:50.000Z</submission> <publication>2016-05-17T12:28:50.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/190?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="191"> <name>NR model 5</name> <description>NR model 5</description> <cross_references /> <dates> <created>2016-05-17T12:30:57.000Z</created> <last_modified>2016-05-17T12:30:58.000Z</last_modified> <submission>2016-05-17T12:30:57.000Z</submission> <publication>2016-05-17T12:30:58.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/191?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="192"> <name>NR model 6</name> <description>NR model 6</description> <cross_references /> <dates> <created>2016-05-17T12:31:56.000Z</created> <last_modified>2016-05-17T12:31:56.000Z</last_modified> <submission>2016-05-17T12:31:56.000Z</submission> <publication>2016-05-17T12:31:56.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/192?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="196"> <name>BIOMD0000000005 from BioModels Database</name> <description>BIOMD0000000005 from BioModels Database</description> <cross_references /> <dates> <created>2016-05-26T11:08:18.000Z</created> <last_modified>2019-12-16T12:55:43.000Z</last_modified> <submission>2016-05-26T11:08:18.000Z</submission> <publication>2019-12-16T12:55:43.000Z</publication> </dates> <additional_fields> <field name="submitter">Ron Henkel</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/196?version=3</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Heidelberg Institute for Theoretical Studies (HITS gGmbH)</field> <field name="submitter_affiliation">University of Rostock</field> </additional_fields> </entry> <entry id="225"> <name>Metabolic model of Sulfolobus solfataricus</name> <description>Metabolic model of Sulfolobus solfataricus</description> <cross_references /> <dates> <created>2016-07-28T13:31:24.000Z</created> <last_modified>2016-10-20T06:23:46.000Z</last_modified> <submission>2016-07-28T13:31:24.000Z</submission> <publication>2016-10-20T06:23:46.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacqueline Wolf</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/225?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Braunschweig</field> </additional_fields> </entry> <entry id="226"> <name>Hepatic galactose model</name> <description>Hepatic galactose model</description> <cross_references /> <dates> <created>2016-08-16T14:10:00.000Z</created> <last_modified>2016-08-16T14:10:01.000Z</last_modified> <submission>2016-08-16T14:10:00.000Z</submission> <publication>2016-08-16T14:10:01.000Z</publication> </dates> <additional_fields> <field name="submitter">Matthias König</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/226?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Charité University Medicine Berlin</field> <field name="submitter_affiliation">Humboldt-Universität zu Berlin</field> <field name="submitter_affiliation">Humboldt University Berlin</field> </additional_fields> </entry> <entry id="231"> <name>Metabolic model of Sulfolobus solfataricus</name> <description>Metabolic model of Sulfolobus solfataricus</description> <cross_references /> <dates> <created>2016-10-12T09:03:27.000Z</created> <last_modified>2017-04-24T16:00:37.000Z</last_modified> <submission>2016-10-12T09:03:27.000Z</submission> <publication>2017-04-24T16:00:37.000Z</publication> </dates> <additional_fields> <field name="submitter">Helge Stark</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/231?version=2</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Braunschweig</field> </additional_fields> </entry> <entry id="241"> <name>BaF3 model</name> <description>BaF3 model</description> <cross_references /> <dates> <created>2017-01-12T08:16:01.000Z</created> <last_modified>2017-01-12T08:20:09.000Z</last_modified> <submission>2017-01-12T08:16:01.000Z</submission> <publication>2017-01-12T08:20:09.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/241?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="242"> <name>mCFU-E model</name> <description>mCFU-E model</description> <cross_references /> <dates> <created>2017-01-12T08:17:02.000Z</created> <last_modified>2017-01-12T08:20:09.000Z</last_modified> <submission>2017-01-12T08:17:02.000Z</submission> <publication>2017-01-12T08:20:09.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/242?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="243"> <name>Arabidopsis clock model P2011.1.2</name> <description>Arabidopsis clock model P2011.1.2</description> <cross_references /> <dates> <created>2017-02-01T21:32:47.000Z</created> <last_modified>2018-03-27T13:54:05.000Z</last_modified> <submission>2017-02-01T21:32:47.000Z</submission> <publication>2018-03-27T13:54:05.000Z</publication> </dates> <additional_fields> <field name="submitter">Andrew Millar</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/243?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="247"> <name>Chew_et_al_2014_Framework_Model version 1, Matlab and Simile</name> <description>Chew_et_al_2014_Framework_Model version 1, Matlab and Simile</description> <cross_references /> <dates> <created>2017-02-06T13:08:14.000Z</created> <last_modified>2018-08-22T11:40:31.000Z</last_modified> <submission>2017-02-06T13:08:14.000Z</submission> <publication>2018-08-22T11:40:31.000Z</publication> </dates> <additional_fields> <field name="submitter">Andrew Millar</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/247?version=1</field> <field name="ModelFormat">Matlab package</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="248"> <name>Framework Model v2</name> <description>Framework Model v2</description> <cross_references /> <dates> <created>2017-02-06T15:43:55.000Z</created> <last_modified>2019-12-20T17:43:07.000Z</last_modified> <submission>2017-02-06T15:43:55.000Z</submission> <publication>2019-12-20T17:43:07.000Z</publication> </dates> <additional_fields> <field name="submitter">Daniel Seaton</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/248?version=2</field> <field name="ModelFormat">Matlab package</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="249"> <name>Hartmut Bossel's Miniworld</name> <description>Hartmut Bossel's Miniworld</description> <cross_references /> <dates> <created>2017-02-22T20:15:54.000Z</created> <last_modified>2017-02-22T20:15:54.000Z</last_modified> <submission>2017-02-22T20:15:54.000Z</submission> <publication>2017-02-22T20:15:54.000Z</publication> </dates> <additional_fields> <field name="submitter">Robert Muetzelfeldt</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/249?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="267"> <name>Genome Scale Metabolic model of M. hyopneumoniae</name> <description>Genome Scale Metabolic model of M. hyopneumoniae</description> <cross_references /> <dates> <created>2017-05-03T09:31:08.000Z</created> <last_modified>2019-01-14T15:00:54.000Z</last_modified> <submission>2017-05-03T09:31:08.000Z</submission> <publication>2019-01-14T15:00:54.000Z</publication> </dates> <additional_fields> <field name="submitter">Niels Zondervan</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/267?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Wageningen University & Research</field> </additional_fields> </entry> <entry id="269"> <name>Dynamic model of glycolysis, pyruvate metabolism and NoxE in M. pneumonaie with innitial parameter values and annotation</name> <description>Dynamic model of glycolysis, pyruvate metabolism and NoxE in M. pneumonaie with innitial parameter values and annotation</description> <cross_references /> <dates> <created>2017-05-15T12:21:47.000Z</created> <last_modified>2019-11-20T23:07:00.000Z</last_modified> <submission>2017-05-15T12:21:47.000Z</submission> <publication>2019-11-20T23:07:00.000Z</publication> </dates> <additional_fields> <field name="submitter">Niels Zondervan</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/269?version=3</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Wageningen University & Research</field> </additional_fields> </entry> <entry id="279"> <name>Kinetic model of antibiotic-mediated inhibition of ribosomes</name> <description>Kinetic model of antibiotic-mediated inhibition of ribosomes</description> <cross_references /> <dates> <created>2017-09-26T10:02:59.000Z</created> <last_modified>2017-09-27T10:30:30.000Z</last_modified> <submission>2017-09-26T10:02:59.000Z</submission> <publication>2017-09-27T10:30:30.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/279?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="280"> <name>PGK yeast with/without recycling</name> <description>PGK yeast with/without recycling</description> <cross_references /> <dates> <created>2017-09-28T10:32:15.000Z</created> <last_modified>2017-09-28T10:32:15.000Z</last_modified> <submission>2017-09-28T10:32:15.000Z</submission> <publication>2017-09-28T10:32:15.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/280?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="281"> <name>PGK yeast Fig1a</name> <description>PGK yeast Fig1a</description> <cross_references /> <dates> <created>2017-09-28T11:09:35.000Z</created> <last_modified>2017-09-28T11:09:35.000Z</last_modified> <submission>2017-09-28T11:09:35.000Z</submission> <publication>2017-09-28T11:09:35.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/281?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="282"> <name>BPG stability notebook</name> <description>BPG stability notebook</description> <cross_references /> <dates> <created>2017-09-29T13:03:23.000Z</created> <last_modified>2019-04-02T15:30:31.000Z</last_modified> <submission>2017-09-29T13:03:23.000Z</submission> <publication>2019-04-02T15:30:31.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/282?version=2</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="284"> <name>PGK 70C SBML</name> <description>PGK 70C SBML</description> <cross_references /> <dates> <created>2017-09-29T13:15:24.000Z</created> <last_modified>2017-09-29T13:15:25.000Z</last_modified> <submission>2017-09-29T13:15:24.000Z</submission> <publication>2017-09-29T13:15:25.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/284?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="285"> <name>PGK-GAPDH models yeast and Sulfolobus Fig. 4</name> <description>PGK-GAPDH models yeast and Sulfolobus Fig. 4</description> <cross_references /> <dates> <created>2017-09-29T13:26:58.000Z</created> <last_modified>2017-09-29T13:27:37.000Z</last_modified> <submission>2017-09-29T13:26:58.000Z</submission> <publication>2017-09-29T13:27:37.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/285?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="286"> <name>PGK-GAPDH model yeast kouril7</name> <description>PGK-GAPDH model yeast kouril7</description> <cross_references /> <dates> <created>2017-09-29T13:30:34.000Z</created> <last_modified>2017-09-29T13:30:34.000Z</last_modified> <submission>2017-09-29T13:30:34.000Z</submission> <publication>2017-09-29T13:30:34.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/286?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="287"> <name>PGK-GAPDH model Sulfolobus kouril8</name> <description>PGK-GAPDH model Sulfolobus kouril8</description> <cross_references /> <dates> <created>2017-09-29T13:32:15.000Z</created> <last_modified>2017-09-29T13:32:15.000Z</last_modified> <submission>2017-09-29T13:32:15.000Z</submission> <publication>2017-09-29T13:32:15.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/287?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="298"> <name>Translational coincidence modelling - python scripts</name> <description>Translational coincidence modelling - python scripts</description> <cross_references /> <dates> <created>2017-12-04T21:42:44.000Z</created> <last_modified>2018-02-20T22:03:55.000Z</last_modified> <submission>2017-12-04T21:42:44.000Z</submission> <publication>2018-02-20T22:03:55.000Z</publication> </dates> <additional_fields> <field name="submitter">Daniel Seaton</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/298?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="308"> <name>Estimation of translation and turnover - python scripts</name> <description>Estimation of translation and turnover - python scripts</description> <cross_references /> <dates> <created>2018-01-15T07:26:39.000Z</created> <last_modified>2018-02-21T11:32:33.000Z</last_modified> <submission>2018-01-15T07:26:39.000Z</submission> <publication>2018-02-21T11:32:33.000Z</publication> </dates> <additional_fields> <field name="submitter">Daniel Seaton</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/308?version=3</field> <field name="ModelFormat" /> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="310"> <name>Model I - Mathematical model of the growth dynamics of P. aeruginosa in the presence of meropenem</name> <description>Model I - Mathematical model of the growth dynamics of P. aeruginosa in the presence of meropenem</description> <cross_references /> <dates> <created>2018-02-06T15:40:54.000Z</created> <last_modified>2018-02-06T15:40:54.000Z</last_modified> <submission>2018-02-06T15:40:54.000Z</submission> <publication>2018-02-06T15:40:54.000Z</publication> </dates> <additional_fields> <field name="submitter">Chloe Spalding</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/310?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">University of Birmingham</field> </additional_fields> </entry> <entry id="314"> <name>P2011.1.2_directupload</name> <description>P2011.1.2_directupload</description> <cross_references /> <dates> <created>2018-03-27T15:16:30.000Z</created> <last_modified>2018-03-27T15:16:30.000Z</last_modified> <submission>2018-03-27T15:16:30.000Z</submission> <publication>2018-03-27T15:16:30.000Z</publication> </dates> <additional_fields> <field name="submitter">Andrew Millar</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/314?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="319"> <name>iKS1317.xml</name> <description>iKS1317.xml</description> <cross_references /> <dates> <created>2018-05-14T11:44:25.000Z</created> <last_modified>2019-01-18T10:25:22.000Z</last_modified> <submission>2018-05-14T11:44:25.000Z</submission> <publication>2019-01-18T10:25:22.000Z</publication> </dates> <additional_fields> <field name="submitter">Snorre Sulheim</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/319?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">SINTEF</field> </additional_fields> </entry> <entry id="320"> <name>Morpheus: open source modelling and simulation framework for multicellular systems</name> <description>Morpheus: open source modelling and simulation framework for multicellular systems</description> <cross_references /> <dates> <created>2018-06-08T15:42:10.000Z</created> <last_modified>2018-06-08T15:42:10.000Z</last_modified> <submission>2018-06-08T15:42:10.000Z</submission> <publication>2018-06-08T15:42:10.000Z</publication> </dates> <additional_fields> <field name="submitter">Lutz Brusch</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/320?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Technische Universität Dresden</field> </additional_fields> </entry> <entry id="321"> <name>Morpheus model of spatio-temporal Smo regulation in response to Hh signaling</name> <description>Morpheus model of spatio-temporal Smo regulation in response to Hh signaling</description> <cross_references /> <dates> <created>2018-06-08T15:55:51.000Z</created> <last_modified>2018-06-08T15:55:52.000Z</last_modified> <submission>2018-06-08T15:55:51.000Z</submission> <publication>2018-06-08T15:55:52.000Z</publication> </dates> <additional_fields> <field name="submitter">Lutz Brusch</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field 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Dresden</field> </additional_fields> </entry> <entry id="324"> <name>gustavsson5 model</name> <description>gustavsson5 model</description> <cross_references /> <dates> <created>2018-07-16T14:19:38.000Z</created> <last_modified>2018-07-16T14:31:48.000Z</last_modified> <submission>2018-07-16T14:19:38.000Z</submission> <publication>2018-07-16T14:31:48.000Z</publication> </dates> <additional_fields> <field name="submitter">Dawie van Niekerk</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/324?version=2</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="325"> <name>gustavsson1-4 models</name> <description>gustavsson1-4 models</description> <cross_references /> <dates> <created>2018-07-16T14:42:20.000Z</created> 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<publication>2018-07-30T19:02:55.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/326?version=2</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="361"> <name>3PG - PLM_12, version 1, SUBMITTED</name> <description>3PG - PLM_12, version 1, SUBMITTED</description> <cross_references /> <dates> <created>2019-01-10T16:47:03.000Z</created> <last_modified>2019-01-10T16:54:55.000Z</last_modified> <submission>2019-01-10T16:47:03.000Z</submission> <publication>2019-01-10T16:54:55.000Z</publication> </dates> <additional_fields> <field name="submitter">BioData SynthSys</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/361?version=1</field> <field name="ModelFormat">Simile XML v3</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="362"> <name>AFRC Wheat 2 evapw submodel - PLM_33, version 1, SUBMITTED</name> <description>AFRC Wheat 2 evapw submodel - PLM_33, version 1, SUBMITTED</description> <cross_references /> <dates> <created>2019-01-10T16:47:04.000Z</created> <last_modified>2019-01-10T16:54:55.000Z</last_modified> <submission>2019-01-10T16:47:04.000Z</submission> <publication>2019-01-10T16:54:55.000Z</publication> </dates> <additional_fields> <field name="submitter">BioData SynthSys</field> <field 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v3</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="364"> <name>AFRC Wheat 2 julday submodel - PLM_35, version 1, SUBMITTED</name> <description>AFRC Wheat 2 julday submodel - PLM_35, version 1, SUBMITTED</description> <cross_references /> <dates> <created>2019-01-10T16:47:07.000Z</created> <last_modified>2019-01-10T16:54:56.000Z</last_modified> <submission>2019-01-10T16:47:07.000Z</submission> <publication>2019-01-10T16:54:56.000Z</publication> </dates> <additional_fields> <field name="submitter">BioData SynthSys</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/364?version=1</field> <field name="ModelFormat">Simile XML v3</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="365"> <name>AFRC Wheat 2 ldim submodel - PLM_36, version 1, SUBMITTED</name> <description>AFRC Wheat 2 ldim submodel - PLM_36, version 1, SUBMITTED</description> <cross_references /> <dates> <created>2019-01-10T16:47:09.000Z</created> <last_modified>2019-01-10T16:54:57.000Z</last_modified> <submission>2019-01-10T16:47:09.000Z</submission> <publication>2019-01-10T16:54:57.000Z</publication> </dates> <additional_fields> <field name="submitter">BioData SynthSys</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/365?version=1</field> <field name="ModelFormat">Simile XML v3</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="366"> <name>AFRC Wheat 2 photpd submodel - PLM_37, version 1, SUBMITTED</name> <description>AFRC Wheat 2 photpd submodel - PLM_37, version 1, SUBMITTED</description> <cross_references /> <dates> <created>2019-01-10T16:47:11.000Z</created> <last_modified>2019-01-10T16:54:57.000Z</last_modified> <submission>2019-01-10T16:47:11.000Z</submission> <publication>2019-01-10T16:54:57.000Z</publication> </dates> <additional_fields> <field name="submitter">BioData SynthSys</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/366?version=1</field> <field name="ModelFormat">Simile XML v3</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="367"> <name>AFRC Wheat 2 tdays submodel - PLM_38, version 1, SUBMITTED</name> <description>AFRC Wheat 2 tdays submodel - PLM_38, version 1, SUBMITTED</description> <cross_references /> <dates> <created>2019-01-10T16:47:13.000Z</created> <last_modified>2019-01-10T16:54:58.000Z</last_modified> <submission>2019-01-10T16:47:13.000Z</submission> <publication>2019-01-10T16:54:58.000Z</publication> </dates> <additional_fields> <field 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</additional_fields> </entry> <entry id="370"> <name>AFRC Wheat 2 weathr submodel - PLM_41, version 1, SUBMITTED</name> <description>AFRC Wheat 2 weathr submodel - PLM_41, version 1, SUBMITTED</description> <cross_references /> <dates> <created>2019-01-10T16:47:18.000Z</created> <last_modified>2019-01-10T16:55:00.000Z</last_modified> <submission>2019-01-10T16:47:18.000Z</submission> <publication>2019-01-10T16:55:00.000Z</publication> </dates> <additional_fields> <field name="submitter">BioData SynthSys</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/370?version=1</field> <field name="ModelFormat">Simile XML v3</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="371"> <name>AFRC Wheat2 dev submodel - PLM_32, version 1, SUBMITTED</name> <description>AFRC Wheat2 dev submodel - PLM_32, version 1, SUBMITTED</description> <cross_references /> <dates> <created>2019-01-10T16:47:20.000Z</created> <last_modified>2019-01-10T16:55:00.000Z</last_modified> <submission>2019-01-10T16:47:20.000Z</submission> <publication>2019-01-10T16:55:00.000Z</publication> </dates> <additional_fields> <field name="submitter">BioData SynthSys</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/371?version=1</field> <field name="ModelFormat">Simile XML v3</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="373"> <name>Arabidopsis - starch and the circadian clock, Model 1 (Seaton et al., 2013) - PLM_77, version 1, SUBMITTED</name> <description>Arabidopsis - starch and the circadian clock, Model 1 (Seaton et al., 2013) - PLM_77, version 1, SUBMITTED</description> <cross_references /> <dates> <created>2019-01-10T16:47:23.000Z</created> <last_modified>2019-01-10T16:55:01.000Z</last_modified> <submission>2019-01-10T16:47:23.000Z</submission> <publication>2019-01-10T16:55:01.000Z</publication> </dates> <additional_fields> <field name="submitter">BioData SynthSys</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/373?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="374"> <name>Arabidopsis - starch and the circadian clock, Model 1 (Seaton et al., 2013) - PLM_77, version 1, SIMPLIFIED</name> <description>Arabidopsis - starch and the circadian clock, Model 1 (Seaton et al., 2013) - PLM_77, version 1, SIMPLIFIED</description> <cross_references /> <dates> <created>2019-01-10T16:47:25.000Z</created> <last_modified>2019-01-10T16:55:02.000Z</last_modified> <submission>2019-01-10T16:47:25.000Z</submission> <publication>2019-01-10T16:55:02.000Z</publication> </dates> <additional_fields> <field name="submitter">BioData SynthSys</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/374?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="375"> <name>Arabidopsis - starch and the circadian clock, Model 2 (Seaton et al., 2013) - PLM_78, version 1, SUBMITTED</name> <description>Arabidopsis - starch and the circadian clock, Model 2 (Seaton et al., 2013) - PLM_78, version 1, SUBMITTED</description> <cross_references /> <dates> <created>2019-01-10T16:47:27.000Z</created> <last_modified>2019-01-10T16:55:03.000Z</last_modified> <submission>2019-01-10T16:47:27.000Z</submission> <publication>2019-01-10T16:55:03.000Z</publication> </dates> <additional_fields> <field name="submitter">BioData 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<field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="378"> <name>Arabidopsis - starch and the circadian clock, Model 3 (Seaton et al., 2013) - PLM_79, version 1, SIMPLIFIED</name> <description>Arabidopsis - starch and the circadian clock, Model 3 (Seaton et al., 2013) - PLM_79, version 1, SIMPLIFIED</description> <cross_references /> <dates> <created>2019-01-10T16:47:32.000Z</created> <last_modified>2019-01-10T16:55:04.000Z</last_modified> <submission>2019-01-10T16:47:32.000Z</submission> <publication>2019-01-10T16:55:04.000Z</publication> </dates> <additional_fields> <field name="submitter">BioData SynthSys</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/378?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="379"> <name>Arabidopsis clock model P2011, graphical diagram - PLM_1045, version 1, SUBMITTED</name> <description>Arabidopsis clock model P2011, graphical diagram - PLM_1045, version 1, SUBMITTED</description> <cross_references /> <dates> <created>2019-01-10T16:47:33.000Z</created> <last_modified>2019-01-22T17:15:53.000Z</last_modified> <submission>2019-01-10T16:47:33.000Z</submission> <publication>2019-01-22T17:15:53.000Z</publication> </dates> <additional_fields> <field name="submitter">BioData SynthSys</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/379?version=1</field> <field name="ModelFormat">SBGN-ML PD</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="380"> <name>Arabidopsis clock model P2011.3.1 - PLM_1041, version 1, SUBMITTED</name> <description>Arabidopsis clock model P2011.3.1 - PLM_1041, version 1, SUBMITTED</description> <cross_references /> <dates> <created>2019-01-10T16:47:35.000Z</created> <last_modified>2019-12-20T11:02:14.000Z</last_modified> <submission>2019-01-10T16:47:35.000Z</submission> <publication>2019-12-20T11:02:14.000Z</publication> </dates> <additional_fields> <field name="submitter">BioData SynthSys</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/380?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="381"> <name>Arabidopsis clock model P2011.3.1 - PLM_1041, version 1, SIMPLIFIED</name> <description>Arabidopsis clock model P2011.3.1 - PLM_1041, version 1, SIMPLIFIED</description> <cross_references /> <dates> <created>2019-01-10T16:47:37.000Z</created> <last_modified>2019-12-20T11:00:56.000Z</last_modified> 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<description>T2011 Ostreococcus clock, TOC1 degr L - PLM_89, version 2, SIMPLIFIED</description> <cross_references /> <dates> <created>2019-01-10T16:52:07.000Z</created> <last_modified>2019-01-10T16:56:34.000Z</last_modified> <submission>2019-01-10T16:52:07.000Z</submission> <publication>2019-01-10T16:56:34.000Z</publication> </dates> <additional_fields> <field name="submitter">BioData SynthSys</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/528?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="538"> <name>TRIFFID - PLM_5, version 1, SUBMITTED</name> <description>TRIFFID - PLM_5, version 1, SUBMITTED</description> <cross_references /> <dates> <created>2019-01-10T16:52:24.000Z</created> <last_modified>2019-01-10T16:56:43.000Z</last_modified> <submission>2019-01-10T16:52:24.000Z</submission> <publication>2019-01-10T16:56:43.000Z</publication> </dates> <additional_fields> <field name="submitter">BioData SynthSys</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/538?version=1</field> <field name="ModelFormat">Simile XML v3</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="539"> <name>Troein Ostreococcus clock 1-loop - PLM_7, version 1, SUBMITTED</name> <description>Troein Ostreococcus clock 1-loop - PLM_7, version 1, SUBMITTED</description> <cross_references /> <dates> <created>2019-01-10T16:52:26.000Z</created> <last_modified>2019-01-10T16:56:43.000Z</last_modified> <submission>2019-01-10T16:52:26.000Z</submission> <publication>2019-01-10T16:56:43.000Z</publication> </dates> <additional_fields> <field name="submitter">BioData SynthSys</field> <field 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<field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="541"> <name>Troein Ostreococcus clock 1-loop - PLM_7, version 2, SUBMITTED</name> <description>Troein Ostreococcus clock 1-loop - PLM_7, version 2, SUBMITTED</description> <cross_references /> <dates> <created>2019-01-10T16:52:29.000Z</created> <last_modified>2019-01-10T16:56:44.000Z</last_modified> <submission>2019-01-10T16:52:29.000Z</submission> <publication>2019-01-10T16:56:44.000Z</publication> </dates> <additional_fields> <field name="submitter">BioData SynthSys</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/541?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="542"> <name>Troein Ostreococcus clock 1-loop - PLM_7, version 2, SIMPLIFIED</name> <description>Troein Ostreococcus clock 1-loop - PLM_7, version 2, SIMPLIFIED</description> <cross_references /> <dates> <created>2019-01-10T16:52:31.000Z</created> <last_modified>2019-01-10T16:56:45.000Z</last_modified> <submission>2019-01-10T16:52:31.000Z</submission> <publication>2019-01-10T16:56:45.000Z</publication> </dates> <additional_fields> <field name="submitter">BioData SynthSys</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/542?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="548"> <name>Core model of glycolysis, pyruvate metabolism ATPase + NoxE reaction</name> <description>Core model of glycolysis, pyruvate metabolism ATPase + NoxE reaction</description> <cross_references /> <dates> <created>2019-01-13T11:24:42.000Z</created> <last_modified>2019-01-14T15:00:54.000Z</last_modified> <submission>2019-01-13T11:24:42.000Z</submission> <publication>2019-01-14T15:00:54.000Z</publication> </dates> <additional_fields> <field name="submitter">Niels Zondervan</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/548?version=1</field> <field name="ModelFormat">Copasi</field> <field name="submitter_affiliation">Wageningen University & Research</field> </additional_fields> </entry> <entry id="555"> <name>Yeast_deFBA Model</name> <description>Yeast_deFBA Model</description> <cross_references /> <dates> <created>2019-03-11T14:33:23.000Z</created> <last_modified>2019-03-11T14:33:23.000Z</last_modified> <submission>2019-03-11T14:33:23.000Z</submission> <publication>2019-03-11T14:33:23.000Z</publication> </dates> <additional_fields> <field name="submitter">Henning Lindhorst</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/555?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Otto-von-Guericke University Magdeburg</field> </additional_fields> </entry> <entry id="556"> <name>Enzymatic Growth Model</name> <description>Enzymatic Growth Model</description> <cross_references /> <dates> <created>2019-03-11T14:40:18.000Z</created> <last_modified>2019-03-11T14:40:18.000Z</last_modified> <submission>2019-03-11T14:40:18.000Z</submission> <publication>2019-03-11T14:40:18.000Z</publication> </dates> <additional_fields> <field name="submitter">Henning Lindhorst</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/556?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Otto-von-Guericke University Magdeburg</field> </additional_fields> </entry> <entry id="557"> <name>Carbon Core deFBA Model</name> <description>Carbon Core deFBA Model</description> <cross_references /> <dates> <created>2019-03-11T14:44:36.000Z</created> <last_modified>2019-03-11T15:12:38.000Z</last_modified> <submission>2019-03-11T14:44:36.000Z</submission> <publication>2019-03-11T15:12:38.000Z</publication> </dates> <additional_fields> <field name="submitter">Henning Lindhorst</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/557?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Otto-von-Guericke University Magdeburg</field> </additional_fields> </entry> <entry id="558"> <name>Resource Allocation Model</name> <description>Resource Allocation Model</description> <cross_references /> <dates> <created>2019-03-11T15:10:16.000Z</created> <last_modified>2019-03-11T15:10:16.000Z</last_modified> <submission>2019-03-11T15:10:16.000Z</submission> <publication>2019-03-11T15:10:16.000Z</publication> </dates> <additional_fields> <field name="submitter">Henning Lindhorst</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/558?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Otto-von-Guericke University Magdeburg</field> </additional_fields> </entry> <entry id="559"> <name>PGK 70C</name> <description>PGK 70C</description> <cross_references /> <dates> <created>2019-03-17T08:37:54.000Z</created> <last_modified>2019-03-17T08:37:54.000Z</last_modified> <submission>2019-03-17T08:37:54.000Z</submission> <publication>2019-03-17T08:37:54.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/559?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="565"> <name>XDH model</name> <description>XDH model</description> <cross_references /> <dates> <created>2019-03-27T09:33:52.000Z</created> <last_modified>2020-01-06T15:17:25.000Z</last_modified> <submission>2019-03-27T09:33:52.000Z</submission> <publication>2020-01-06T15:17:25.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/565?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="566"> <name>XLA model</name> <description>XLA model</description> <cross_references /> <dates> <created>2019-03-27T11:31:02.000Z</created> <last_modified>2020-01-06T15:17:25.000Z</last_modified> <submission>2019-03-27T11:31:02.000Z</submission> <publication>2020-01-06T15:17:25.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/566?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="567"> <name>XAD model</name> <description>XAD model</description> <cross_references /> <dates> <created>2019-03-27T14:41:22.000Z</created> <last_modified>2020-01-06T15:17:25.000Z</last_modified> <submission>2019-03-27T14:41:22.000Z</submission> <publication>2020-01-06T15:17:25.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/567?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="568"> <name>KDXD model</name> <description>KDXD model</description> <cross_references /> <dates> <created>2019-03-28T08:55:28.000Z</created> <last_modified>2020-01-06T15:17:25.000Z</last_modified> <submission>2019-03-28T08:55:28.000Z</submission> <publication>2020-01-06T15:17:25.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/568?version=1</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="570"> <name>KGSADH model</name> <description>KGSADH model</description> <cross_references /> <dates> <created>2019-03-29T14:39:05.000Z</created> <last_modified>2020-01-06T15:17:26.000Z</last_modified> <submission>2019-03-29T14:39:05.000Z</submission> <publication>2020-01-06T15:17:26.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field 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name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/571?version=1</field> <field name="ModelFormat">Copasi</field> <field name="submitter_affiliation">University of Amsterdam</field> <field name="submitter_affiliation">VU University Amsterdam</field> <field name="submitter_affiliation">Infrastructure Systems Biology Europe</field> <field name="submitter_affiliation">University of Luxembourg</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="592"> <name>One-Pot-Cascade 13</name> <description>One-Pot-Cascade 13</description> <cross_references /> <dates> <created>2019-04-10T13:24:04.000Z</created> <last_modified>2020-01-06T15:17:27.000Z</last_modified> <submission>2019-04-10T13:24:04.000Z</submission> <publication>2020-01-06T15:17:27.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/592?version=2</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="594"> <name>One-Pot-Cascade 10</name> <description>One-Pot-Cascade 10</description> <cross_references /> <dates> <created>2019-04-10T13:27:00.000Z</created> <last_modified>2020-01-06T15:17:27.000Z</last_modified> <submission>2019-04-10T13:27:00.000Z</submission> <publication>2020-01-06T15:17:27.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/594?version=3</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="599"> <name>Progress curve analysis XDH</name> <description>Progress curve analysis XDH</description> <cross_references /> <dates> <created>2019-04-12T11:22:59.000Z</created> <last_modified>2020-01-08T14:23:49.000Z</last_modified> <submission>2019-04-12T11:22:59.000Z</submission> <publication>2020-01-08T14:23:49.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/599?version=3</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="600"> <name>Progress curve analysis XLA</name> <description>Progress curve analysis XLA</description> <cross_references /> <dates> <created>2019-04-12T11:24:28.000Z</created> <last_modified>2020-01-08T14:24:17.000Z</last_modified> <submission>2019-04-12T11:24:28.000Z</submission> <publication>2020-01-08T14:24:17.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/600?version=3</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="601"> <name>Progress curve analysis XAD</name> <description>Progress curve analysis XAD</description> <cross_references /> <dates> <created>2019-04-12T11:25:18.000Z</created> <last_modified>2020-01-08T14:24:47.000Z</last_modified> <submission>2019-04-12T11:25:18.000Z</submission> <publication>2020-01-08T14:24:47.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/601?version=3</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="602"> <name>Progress curve analysis KDXD</name> <description>Progress curve analysis KDXD</description> <cross_references /> <dates> <created>2019-04-12T11:26:01.000Z</created> <last_modified>2020-01-08T14:25:10.000Z</last_modified> <submission>2019-04-12T11:26:01.000Z</submission> <publication>2020-01-08T14:25:10.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/602?version=3</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="603"> <name>Progress curve analysis KGSADH</name> <description>Progress curve analysis KGSADH</description> <cross_references /> <dates> <created>2019-04-12T11:26:57.000Z</created> <last_modified>2020-01-08T14:25:52.000Z</last_modified> <submission>2019-04-12T11:26:57.000Z</submission> <publication>2020-01-08T14:25:52.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/603?version=3</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="604"> <name>Progress curve analysis combined</name> <description>Progress curve analysis combined</description> <cross_references /> <dates> <created>2019-04-12T11:28:11.000Z</created> <last_modified>2020-01-08T14:23:13.000Z</last_modified> <submission>2019-04-12T11:28:11.000Z</submission> <publication>2020-01-08T14:23:13.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/604?version=3</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="605"> <name>One pot cascade 12</name> <description>One pot cascade 12</description> <cross_references /> <dates> <created>2019-04-12T11:43:18.000Z</created> <last_modified>2020-01-08T11:13:59.000Z</last_modified> <submission>2019-04-12T11:43:18.000Z</submission> <publication>2020-01-08T11:13:59.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/605?version=4</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="607"> <name>One pot cascade 16</name> <description>One pot cascade 16</description> <cross_references /> <dates> <created>2019-04-12T14:33:53.000Z</created> <last_modified>2020-01-06T15:17:27.000Z</last_modified> <submission>2019-04-12T14:33:53.000Z</submission> <publication>2020-01-06T15:17:27.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/607?version=2</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="609"> <name>Progress curve analysis (shen1)</name> <description>Progress curve analysis (shen1)</description> <cross_references /> <dates> <created>2019-04-15T11:00:21.000Z</created> <last_modified>2020-01-06T15:17:26.000Z</last_modified> <submission>2019-04-15T11:00:21.000Z</submission> <publication>2020-01-06T15:17:26.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/609?version=2</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="610"> <name>Cascade analysis (shen2)</name> <description>Cascade analysis (shen2)</description> <cross_references /> <dates> <created>2019-04-15T13:13:09.000Z</created> <last_modified>2020-01-06T15:17:27.000Z</last_modified> <submission>2019-04-15T13:13:09.000Z</submission> <publication>2020-01-06T15:17:27.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/610?version=2</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="611"> <name>CFE Mn NADrec</name> <description>CFE Mn NADrec</description> <cross_references /> <dates> <created>2019-04-16T12:49:21.000Z</created> <last_modified>2020-01-06T15:17:27.000Z</last_modified> <submission>2019-04-16T12:49:21.000Z</submission> <publication>2020-01-06T15:17:27.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/611?version=2</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="613"> <name>CFE no Mn, with NADrec</name> <description>CFE no Mn, with NADrec</description> <cross_references /> <dates> <created>2019-04-16T12:53:33.000Z</created> <last_modified>2020-01-06T15:17:28.000Z</last_modified> <submission>2019-04-16T12:53:33.000Z</submission> <publication>2020-01-06T15:17:28.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/613?version=3</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="614"> <name>CFE Mn noNADrec</name> <description>CFE Mn noNADrec</description> <cross_references /> <dates> <created>2019-04-16T12:55:59.000Z</created> <last_modified>2020-01-08T11:15:09.000Z</last_modified> <submission>2019-04-16T12:55:59.000Z</submission> <publication>2020-01-08T11:15:09.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/614?version=3</field> <field name="ModelFormat">Mathematica</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="615"> <name>CFE analysis (shen2)</name> <description>CFE analysis (shen2)</description> <cross_references /> <dates> <created>2019-04-16T13:05:45.000Z</created> <last_modified>2020-01-06T15:17:27.000Z</last_modified> <submission>2019-04-16T13:05:45.000Z</submission> <publication>2020-01-06T15:17:27.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/615?version=2</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="616"> <name>yeast-GEM 8.3.3</name> <description>yeast-GEM 8.3.3</description> <cross_references /> <dates> <created>2019-04-28T14:44:38.000Z</created> <last_modified>2019-04-28T14:44:38.000Z</last_modified> <submission>2019-04-28T14:44:38.000Z</submission> <publication>2019-04-28T14:44:38.000Z</publication> </dates> <additional_fields> <field name="submitter">Eduard Kerkhoven</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/616?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Glasgow</field> <field name="submitter_affiliation">Chalmers University of Technology</field> </additional_fields> </entry> <entry id="627"> <name>Breast cancer development model</name> <description>Breast cancer development model</description> <cross_references /> <dates> <created>2019-08-20T11:59:50.000Z</created> <last_modified>2020-10-08T16:19:34.000Z</last_modified> <submission>2019-08-20T11:59:50.000Z</submission> <publication>2020-10-08T16:19:34.000Z</publication> </dates> <additional_fields> <field name="submitter">Hannah O'Keefe</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/627?version=8</field> <field name="ModelFormat" /> <field name="submitter_affiliation">University of Newcastle-upon-Tyne</field> <field name="submitter_affiliation">University of Newcastle</field> </additional_fields> </entry> <entry id="628"> <name>Dermal cellular senescence model</name> <description>Dermal cellular senescence model</description> <cross_references /> <dates> <created>2019-08-20T12:03:56.000Z</created> <last_modified>2019-08-20T12:03:56.000Z</last_modified> <submission>2019-08-20T12:03:56.000Z</submission> <publication>2019-08-20T12:03:56.000Z</publication> </dates> <additional_fields> <field name="submitter">Hannah O'Keefe</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/628?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">University of Newcastle-upon-Tyne</field> <field name="submitter_affiliation">University of Newcastle</field> </additional_fields> </entry> <entry id="638"> <name>Standard model of acute inflammation Abudulikemu et al 2020</name> <description>Standard model of acute inflammation Abudulikemu et al 2020</description> <cross_references /> <dates> <created>2019-11-05T12:47:33.000Z</created> <last_modified>2019-11-05T13:05:36.000Z</last_modified> <submission>2019-11-05T12:47:33.000Z</submission> <publication>2019-11-05T13:05:36.000Z</publication> </dates> <additional_fields> <field name="submitter">Hans V. Westerhoff</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/638?version=1</field> <field name="ModelFormat">Copasi</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">VU University Amsterdam</field> <field name="submitter_affiliation">University of Amsterdam</field> <field name="submitter_affiliation">Systems Biology Amsterdam</field> </additional_fields> </entry> <entry id="639"> <name>Innate inflammation homo sapiens</name> <description>Innate inflammation homo sapiens</description> <cross_references /> <dates> <created>2019-11-05T13:12:29.000Z</created> <last_modified>2019-11-05T13:12:29.000Z</last_modified> <submission>2019-11-05T13:12:29.000Z</submission> <publication>2019-11-05T13:12:29.000Z</publication> </dates> <additional_fields> <field name="submitter">Hans V. Westerhoff</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/639?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">VU University Amsterdam</field> <field name="submitter_affiliation">University of Amsterdam</field> <field name="submitter_affiliation">Systems Biology Amsterdam</field> </additional_fields> </entry> <entry id="640"> <name>Innate Inflammation; model 2018</name> <description>Innate Inflammation; model 2018</description> <cross_references /> <dates> <created>2019-11-05T14:18:35.000Z</created> <last_modified>2019-11-05T14:18:35.000Z</last_modified> <submission>2019-11-05T14:18:35.000Z</submission> <publication>2019-11-05T14:18:35.000Z</publication> </dates> <additional_fields> <field name="submitter">Hans V. Westerhoff</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/640?version=1</field> <field name="ModelFormat">Copasi</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">VU University Amsterdam</field> <field name="submitter_affiliation">University of Amsterdam</field> <field name="submitter_affiliation">Systems Biology Amsterdam</field> </additional_fields> </entry> <entry id="643"> <name>Calibrated comprehensive model of ROS management</name> <description>Calibrated comprehensive model of ROS management</description> <cross_references /> <dates> <created>2019-11-25T14:46:57.000Z</created> <last_modified>2019-11-25T14:47:36.000Z</last_modified> <submission>2019-11-25T14:46:57.000Z</submission> <publication>2019-11-25T14:47:36.000Z</publication> </dates> <additional_fields> <field name="submitter">Hans V. Westerhoff</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/643?version=1</field> <field name="ModelFormat">Copasi</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">VU University Amsterdam</field> <field name="submitter_affiliation">University of Amsterdam</field> <field name="submitter_affiliation">Systems Biology Amsterdam</field> </additional_fields> </entry> <entry id="644"> <name>CFE steady state analysis (shen3)</name> <description>CFE steady state analysis (shen3)</description> <cross_references /> <dates> <created>2019-11-29T16:47:49.000Z</created> <last_modified>2020-01-06T15:17:28.000Z</last_modified> <submission>2019-11-29T16:47:49.000Z</submission> <publication>2020-01-06T15:17:28.000Z</publication> </dates> <additional_fields> <field name="submitter">Jacky Snoep</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/644?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">University of Stellenbosch</field> <field name="submitter_affiliation">University of Manchester - Department of Computer Science</field> <field name="submitter_affiliation">Stellenbosch University</field> </additional_fields> </entry> <entry id="645"> <name>Copasi file chronic inflammation Abulikemu et al 2020 (altered units TNF and MMP8) homo sapiens</name> <description>Copasi file chronic inflammation Abulikemu et al 2020 (altered units TNF and MMP8) homo sapiens</description> <cross_references /> <dates> <created>2019-11-29T17:48:20.000Z</created> <last_modified>2019-11-29T17:48:39.000Z</last_modified> <submission>2019-11-29T17:48:20.000Z</submission> <publication>2019-11-29T17:48:39.000Z</publication> </dates> <additional_fields> <field name="submitter">Hans V. Westerhoff</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/645?version=1</field> <field name="ModelFormat">Copasi</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">VU University Amsterdam</field> <field name="submitter_affiliation">University of Amsterdam</field> <field name="submitter_affiliation">Systems Biology Amsterdam</field> </additional_fields> </entry> <entry id="646"> <name>Copasi file acute inflammation Abulikemu et al 2020 (altered units TNF and MMP8) homo sapiens</name> <description>Copasi file acute inflammation Abulikemu et al 2020 (altered units TNF and MMP8) homo sapiens</description> <cross_references /> <dates> <created>2019-11-29T17:55:05.000Z</created> <last_modified>2019-11-29T17:55:25.000Z</last_modified> <submission>2019-11-29T17:55:05.000Z</submission> <publication>2019-11-29T17:55:25.000Z</publication> </dates> <additional_fields> <field name="submitter">Hans V. Westerhoff</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/646?version=1</field> <field name="ModelFormat">Copasi</field> <field name="submitter_affiliation">Manchester Centre for Integrative Systems Biology, University of Manchester</field> <field name="submitter_affiliation">VU University Amsterdam</field> <field name="submitter_affiliation">University of Amsterdam</field> <field name="submitter_affiliation">Systems Biology Amsterdam</field> </additional_fields> </entry> <entry id="654"> <name>P2011.3.1 Copasi</name> <description>P2011.3.1 Copasi</description> <cross_references /> <dates> <created>2019-12-20T10:55:07.000Z</created> <last_modified>2019-12-20T10:55:07.000Z</last_modified> <submission>2019-12-20T10:55:07.000Z</submission> <publication>2019-12-20T10:55:07.000Z</publication> </dates> <additional_fields> <field name="submitter">Andrew Millar</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/654?version=1</field> <field name="ModelFormat">Copasi</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="655"> <name>P2011.6.1 Copasi</name> <description>P2011.6.1 Copasi</description> <cross_references /> <dates> <created>2019-12-20T10:58:55.000Z</created> <last_modified>2019-12-20T10:58:55.000Z</last_modified> <submission>2019-12-20T10:58:55.000Z</submission> <publication>2019-12-20T10:58:55.000Z</publication> </dates> <additional_fields> <field name="submitter">Andrew Millar</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/655?version=1</field> <field name="ModelFormat">Copasi</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="659"> <name>F2014.1.2 with stepfunction</name> <description>F2014.1.2 with stepfunction</description> <cross_references /> <dates> <created>2019-12-20T13:47:20.000Z</created> <last_modified>2019-12-20T13:47:20.000Z</last_modified> <submission>2019-12-20T13:47:20.000Z</submission> <publication>2019-12-20T13:47:20.000Z</publication> </dates> <additional_fields> <field name="submitter">Andrew Millar</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/659?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="660"> <name>F2014.1.2 Copasi</name> <description>F2014.1.2 Copasi</description> <cross_references /> <dates> <created>2019-12-20T13:50:34.000Z</created> <last_modified>2019-12-20T13:50:34.000Z</last_modified> <submission>2019-12-20T13:50:34.000Z</submission> <publication>2019-12-20T13:50:34.000Z</publication> </dates> <additional_fields> <field name="submitter">Andrew Millar</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/660?version=1</field> <field name="ModelFormat">Copasi</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="661"> <name>P2011.1.2 SBML</name> <description>P2011.1.2 SBML</description> <cross_references /> <dates> <created>2019-12-20T13:54:03.000Z</created> <last_modified>2021-07-30T09:54:04.000Z</last_modified> <submission>2019-12-20T13:54:03.000Z</submission> <publication>2021-07-30T09:54:04.000Z</publication> </dates> <additional_fields> <field name="submitter">Uriel Urquiza Garcia</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field 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</additional_fields> </entry> <entry id="663"> <name>P2011.1.2 Antimony</name> <description>P2011.1.2 Antimony</description> <cross_references /> <dates> <created>2019-12-20T15:42:25.000Z</created> <last_modified>2021-07-30T09:54:04.000Z</last_modified> <submission>2019-12-20T15:42:25.000Z</submission> <publication>2021-07-30T09:54:04.000Z</publication> </dates> <additional_fields> <field name="submitter">Uriel Urquiza Garcia</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/663?version=2</field> <field name="ModelFormat" /> <field name="submitter_affiliation">University of Edinburgh</field> <field name="submitter_affiliation">Heinrich Heine University of Düsseldorf</field> </additional_fields> </entry> <entry id="688"> <name>Salb-GEM.xml</name> <description>Salb-GEM.xml</description> <cross_references /> <dates> <created>2020-02-26T05:22:27.000Z</created> <last_modified>2020-02-26T05:22:27.000Z</last_modified> <submission>2020-02-26T05:22:27.000Z</submission> <publication>2020-02-26T05:22:27.000Z</publication> </dates> <additional_fields> <field name="submitter">Cheewin Kittikunapong</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/688?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Chalmers University of Technology</field> </additional_fields> </entry> <entry id="693"> <name>Comprehensive model for COVID-19 caused by SARS-CoV-2</name> <description>Comprehensive model for COVID-19 caused by SARS-CoV-2</description> <cross_references /> <dates> <created>2020-03-24T14:07:30.000Z</created> <last_modified>2020-04-15T11:05:31.000Z</last_modified> <submission>2020-03-24T14:07:30.000Z</submission> <publication>2020-04-15T11:05:31.000Z</publication> </dates> <additional_fields> <field name="submitter">Alexey Kolodkin</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/693?version=1</field> <field name="ModelFormat">Copasi</field> <field name="submitter_affiliation">University of Amsterdam</field> <field name="submitter_affiliation">VU University Amsterdam</field> <field name="submitter_affiliation">Infrastructure Systems Biology Europe</field> <field name="submitter_affiliation">University of Luxembourg</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="699"> <name>Renz2020 - GEM of Human alveolar macrophage with SARS-CoV-2</name> <description>Renz2020 - GEM of Human alveolar macrophage with SARS-CoV-2</description> <cross_references /> <dates> <created>2020-04-03T17:13:53.000Z</created> <last_modified>2020-05-26T10:21:30.000Z</last_modified> <submission>2020-04-03T17:13:53.000Z</submission> <publication>2020-05-26T10:21:30.000Z</publication> </dates> <additional_fields> <field name="submitter">Martin Golebiewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/699?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Heidelberg Institute for Theoretical Studies (HITS gGmbH)</field> </additional_fields> </entry> <entry id="700"> <name>COVIDPathways - WikiPathways</name> <description>COVIDPathways - WikiPathways</description> <cross_references /> <dates> <created>2020-04-06T18:42:09.000Z</created> <last_modified>2020-04-06T19:14:32.000Z</last_modified> <submission>2020-04-06T18:42:09.000Z</submission> <publication>2020-04-06T19:14:32.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/700?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="701"> <name>PAMP signaling (COVID-19 Disease Map)</name> <description>PAMP signaling (COVID-19 Disease Map)</description> <cross_references /> <dates> <created>2020-04-06T18:52:06.000Z</created> <last_modified>2020-06-24T08:43:36.000Z</last_modified> <submission>2020-04-06T18:52:06.000Z</submission> <publication>2020-06-24T08:43:36.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/701?version=4</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="702"> <name>Orf10 Cul2 pathway (COVID-19 Disease Map)</name> <description>Orf10 Cul2 pathway (COVID-19 Disease Map)</description> <cross_references /> <dates> <created>2020-04-06T19:05:26.000Z</created> <last_modified>2020-08-19T08:08:04.000Z</last_modified> <submission>2020-04-06T19:05:26.000Z</submission> <publication>2020-08-19T08:08:04.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/702?version=4</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="703"> <name>Virus replication cycle (COVID-19 Disease Map)</name> <description>Virus replication cycle (COVID-19 Disease Map)</description> <cross_references /> <dates> <created>2020-04-06T19:09:41.000Z</created> <last_modified>2020-06-24T10:22:07.000Z</last_modified> <submission>2020-04-06T19:09:41.000Z</submission> <publication>2020-06-24T10:22:07.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/703?version=9</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="704"> <name>RTC and transcription (COVID-19 Disease Map)</name> <description>RTC and transcription (COVID-19 Disease Map)</description> <cross_references /> <dates> <created>2020-04-10T09:50:25.000Z</created> <last_modified>2020-06-25T07:10:28.000Z</last_modified> <submission>2020-04-10T09:50:25.000Z</submission> <publication>2020-06-25T07:10:28.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/704?version=3</field> <field name="ModelFormat">SBGN-ML PD</field> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="708"> <name>Nsp4 and Nsp6 interactions (COVID-19 Disease Maps)</name> <description>Nsp4 and Nsp6 interactions (COVID-19 Disease Maps)</description> <cross_references /> <dates> <created>2020-04-20T13:16:56.000Z</created> <last_modified>2020-08-21T12:59:24.000Z</last_modified> <submission>2020-04-20T13:16:56.000Z</submission> <publication>2020-08-21T12:59:24.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/708?version=5</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="709"> <name>Renin-angiotensin pathway (COVID-19 Disease Map)</name> <description>Renin-angiotensin pathway (COVID-19 Disease Map)</description> <cross_references /> <dates> <created>2020-04-20T14:00:10.000Z</created> <last_modified>2021-06-11T17:57:14.000Z</last_modified> <submission>2020-04-20T14:00:10.000Z</submission> <publication>2021-06-11T17:57:14.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/709?version=5</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="710"> <name>The impact of Nsp14 on metabolism (COVID-19 Disease Map)</name> <description>The impact of Nsp14 on metabolism (COVID-19 Disease Map)</description> <cross_references /> <dates> <created>2020-04-23T07:09:08.000Z</created> <last_modified>2020-06-25T06:32:01.000Z</last_modified> <submission>2020-04-23T07:09:08.000Z</submission> <publication>2020-06-25T06:32:01.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/710?version=3</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="711"> <name>ER stress (COVID-19 Disease Map)</name> <description>ER stress (COVID-19 Disease Map)</description> <cross_references /> <dates> <created>2020-04-23T08:27:59.000Z</created> <last_modified>2020-08-17T14:49:36.000Z</last_modified> <submission>2020-04-23T08:27:59.000Z</submission> <publication>2020-08-17T14:49:36.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/711?version=3</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="712"> <name>Apoptosis pathway (COVID-19 Disease Map)</name> <description>Apoptosis pathway (COVID-19 Disease Map)</description> <cross_references /> <dates> <created>2020-04-23T08:45:35.000Z</created> <last_modified>2021-06-11T14:38:16.000Z</last_modified> <submission>2020-04-23T08:45:35.000Z</submission> <publication>2021-06-11T14:38:16.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/712?version=4</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="713"> <name>Interferon 1 pathway (COVID-19 Disease Map)</name> <description>Interferon 1 pathway (COVID-19 Disease Map)</description> <cross_references /> <dates> <created>2020-04-23T08:48:59.000Z</created> <last_modified>2021-06-11T16:01:46.000Z</last_modified> <submission>2020-04-23T08:48:59.000Z</submission> <publication>2021-06-11T16:01:46.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/713?version=5</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="714"> <name>SBML Qual models of selected COVID-19 Disease Map diagrams</name> <description>SBML Qual models of selected COVID-19 Disease Map diagrams</description> <cross_references /> <dates> <created>2020-04-23T09:37:15.000Z</created> <last_modified>2020-04-23T09:38:25.000Z</last_modified> <submission>2020-04-23T09:37:15.000Z</submission> <publication>2020-04-23T09:38:25.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/714?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="718"> <name>HMOX1 pathway (COVID-19 Disease Map)</name> <description>HMOX1 pathway (COVID-19 Disease Map)</description> <cross_references /> <dates> <created>2020-05-04T08:27:53.000Z</created> <last_modified>2021-06-11T15:52:42.000Z</last_modified> <submission>2020-05-04T08:27:53.000Z</submission> <publication>2021-06-11T15:52:42.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/718?version=5</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="719"> <name>Electron Transport Chain (COVID-19 Disease Map)</name> <description>Electron Transport Chain (COVID-19 Disease Map)</description> <cross_references /> <dates> <created>2020-05-04T08:41:00.000Z</created> <last_modified>2020-08-17T15:02:04.000Z</last_modified> <submission>2020-05-04T08:41:00.000Z</submission> <publication>2020-08-17T15:02:04.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/719?version=3</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="720"> <name>Orf3a interactions (COVID-19 Disease Map)</name> <description>Orf3a interactions (COVID-19 Disease Map)</description> <cross_references /> <dates> <created>2020-05-04T08:47:29.000Z</created> <last_modified>2020-08-19T09:47:58.000Z</last_modified> <submission>2020-05-04T08:47:29.000Z</submission> <publication>2020-08-19T09:47:58.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/720?version=5</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="721"> <name>E protein interactions (COVID-19 Disease Map)</name> <description>E protein interactions (COVID-19 Disease Map)</description> <cross_references /> <dates> <created>2020-05-04T08:51:59.000Z</created> <last_modified>2020-06-25T06:09:43.000Z</last_modified> <submission>2020-05-04T08:51:59.000Z</submission> <publication>2020-06-25T06:09:43.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/721?version=3</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="722"> <name>Reactome pathways for SARS-CoV infections</name> <description>Reactome pathways for SARS-CoV infections</description> <cross_references /> <dates> <created>2020-05-04T09:05:50.000Z</created> <last_modified>2020-10-13T10:49:58.000Z</last_modified> <submission>2020-05-04T09:05:50.000Z</submission> <publication>2020-10-13T10:49:58.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/722?version=2</field> <field name="ModelFormat">SBGN-ML PD</field> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="725"> <name>Genome-scale metabolic model (GEM) for reconstraction of flavonoids biosynthetic pathways</name> <description>Genome-scale metabolic model (GEM) for reconstraction of flavonoids biosynthetic pathways</description> <cross_references /> <dates> <created>2020-05-07T09:42:16.000Z</created> <last_modified>2020-12-17T13:50:37.000Z</last_modified> <submission>2020-05-07T09:42:16.000Z</submission> <publication>2020-12-17T13:50:37.000Z</publication> </dates> <additional_fields> <field name="submitter">David San León Granado</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/725?version=7</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">CSIC</field> </additional_fields> </entry> <entry id="726"> <name>U2019.1</name> <description>U2019.1</description> <cross_references /> <dates> <created>2020-05-07T16:17:58.000Z</created> <last_modified>2021-02-28T23:03:41.000Z</last_modified> <submission>2020-05-07T16:17:58.000Z</submission> <publication>2021-02-28T23:03:41.000Z</publication> </dates> <additional_fields> <field name="submitter">Uriel Urquiza Garcia</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/726?version=4</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Edinburgh</field> <field name="submitter_affiliation">Heinrich Heine University of Düsseldorf</field> </additional_fields> </entry> <entry id="727"> <name>U2019.2</name> <description>U2019.2</description> <cross_references /> <dates> <created>2020-05-07T16:22:05.000Z</created> <last_modified>2021-07-31T22:04:07.000Z</last_modified> <submission>2020-05-07T16:22:05.000Z</submission> <publication>2021-07-31T22:04:07.000Z</publication> </dates> <additional_fields> <field name="submitter">Uriel Urquiza Garcia</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/727?version=3</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Edinburgh</field> <field name="submitter_affiliation">Heinrich Heine University of Düsseldorf</field> </additional_fields> </entry> <entry id="728"> <name>U2019.3</name> <description>U2019.3</description> <cross_references /> <dates> <created>2020-05-07T16:28:04.000Z</created> <last_modified>2021-07-31T22:06:00.000Z</last_modified> <submission>2020-05-07T16:28:04.000Z</submission> <publication>2021-07-31T22:06:00.000Z</publication> </dates> <additional_fields> <field name="submitter">Uriel Urquiza Garcia</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/728?version=3</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Edinburgh</field> <field name="submitter_affiliation">Heinrich Heine University of Düsseldorf</field> </additional_fields> </entry> <entry id="729"> <name>U2020.1</name> <description>U2020.1</description> <cross_references /> <dates> <created>2020-05-07T16:45:25.000Z</created> <last_modified>2021-07-31T21:59:09.000Z</last_modified> <submission>2020-05-07T16:45:25.000Z</submission> <publication>2021-07-31T21:59:09.000Z</publication> </dates> <additional_fields> <field name="submitter">Uriel Urquiza Garcia</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/729?version=3</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Edinburgh</field> <field name="submitter_affiliation">Heinrich Heine University of Düsseldorf</field> </additional_fields> </entry> <entry id="730"> <name>U2020.2</name> <description>U2020.2</description> <cross_references /> <dates> <created>2020-05-07T16:48:13.000Z</created> <last_modified>2021-07-31T22:00:43.000Z</last_modified> <submission>2020-05-07T16:48:13.000Z</submission> <publication>2021-07-31T22:00:43.000Z</publication> </dates> <additional_fields> <field name="submitter">Uriel Urquiza Garcia</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/730?version=3</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Edinburgh</field> <field name="submitter_affiliation">Heinrich Heine University of Düsseldorf</field> </additional_fields> </entry> <entry id="731"> <name>U2020.3</name> <description>U2020.3</description> <cross_references /> <dates> <created>2020-05-07T16:50:01.000Z</created> <last_modified>2021-07-31T22:02:37.000Z</last_modified> <submission>2020-05-07T16:50:01.000Z</submission> <publication>2021-07-31T22:02:37.000Z</publication> </dates> <additional_fields> <field name="submitter">Uriel Urquiza Garcia</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/731?version=2</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Edinburgh</field> <field name="submitter_affiliation">Heinrich Heine University of Düsseldorf</field> </additional_fields> </entry> <entry id="732"> <name>Calibrated comprehensive model of ROS management (no attachment, for the right version see http://doi.org/10.15490/FAIRDOMHUB.1.MODEL.734.1)</name> <description>Calibrated comprehensive model of ROS management (no attachment, for the right version see http://doi.org/10.15490/FAIRDOMHUB.1.MODEL.734.1)</description> <cross_references /> <dates> <created>2020-05-09T20:59:24.000Z</created> <last_modified>2020-05-09T21:38:17.000Z</last_modified> <submission>2020-05-09T20:59:24.000Z</submission> <publication>2020-05-09T21:38:17.000Z</publication> </dates> <additional_fields> <field name="submitter">Alexey Kolodkin</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/732?version=1</field> <field name="ModelFormat">Copasi</field> <field name="submitter_affiliation">University of Amsterdam</field> <field name="submitter_affiliation">VU University Amsterdam</field> <field name="submitter_affiliation">Infrastructure Systems Biology Europe</field> <field name="submitter_affiliation">University of Luxembourg</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="734"> <name>Calibrated comprehensive model of ROS management Improved</name> <description>Calibrated comprehensive model of ROS management Improved</description> <cross_references /> <dates> <created>2020-05-09T21:32:37.000Z</created> <last_modified>2020-05-09T21:32:38.000Z</last_modified> <submission>2020-05-09T21:32:37.000Z</submission> <publication>2020-05-09T21:32:38.000Z</publication> </dates> <additional_fields> <field name="submitter">Alexey Kolodkin</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/734?version=1</field> <field name="ModelFormat">Copasi</field> <field name="submitter_affiliation">University of Amsterdam</field> <field name="submitter_affiliation">VU University Amsterdam</field> <field name="submitter_affiliation">Infrastructure Systems Biology Europe</field> <field name="submitter_affiliation">University of Luxembourg</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="735"> <name>JNK pathway (COVID-19 Disease Map)</name> <description>JNK pathway (COVID-19 Disease Map)</description> <cross_references /> <dates> <created>2020-05-20T14:57:42.000Z</created> <last_modified>2020-06-24T10:17:23.000Z</last_modified> <submission>2020-05-20T14:57:42.000Z</submission> <publication>2020-06-24T10:17:23.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/735?version=3</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="736"> <name>Nsp9 interactions (COVID-19 Disease Map)</name> <description>Nsp9 interactions (COVID-19 Disease Map)</description> <cross_references /> <dates> <created>2020-05-20T15:12:18.000Z</created> <last_modified>2020-08-19T09:30:52.000Z</last_modified> <submission>2020-05-20T15:12:18.000Z</submission> <publication>2020-08-19T09:30:52.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/736?version=4</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="737"> <name>Virus replication cycle in mEPN/SBGN (COVID-19 Disease Map)</name> <description>Virus replication cycle in mEPN/SBGN (COVID-19 Disease Map)</description> <cross_references /> <dates> <created>2020-06-08T11:59:13.000Z</created> <last_modified>2020-06-08T11:59:14.000Z</last_modified> <submission>2020-06-08T11:59:13.000Z</submission> <publication>2020-06-08T11:59:14.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/737?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="738"> <name>COVID-19 SIGNOR dataset</name> <description>COVID-19 SIGNOR dataset</description> <cross_references /> <dates> <created>2020-06-26T07:38:10.000Z</created> <last_modified>2020-06-29T13:31:08.000Z</last_modified> <submission>2020-06-26T07:38:10.000Z</submission> <publication>2020-06-29T13:31:08.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/738?version=2</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="739"> <name>Main Figure 2 COPASI</name> <description>Main Figure 2 COPASI</description> <cross_references /> <dates> <created>2020-07-10T19:20:43.000Z</created> <last_modified>2020-07-20T15:08:51.000Z</last_modified> <submission>2020-07-10T19:20:43.000Z</submission> <publication>2020-07-20T15:08:51.000Z</publication> </dates> <additional_fields> <field name="submitter">Alexey Kolodkin</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/739?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">University of Amsterdam</field> <field name="submitter_affiliation">VU University Amsterdam</field> <field name="submitter_affiliation">Infrastructure Systems Biology Europe</field> <field name="submitter_affiliation">University of Luxembourg</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="740"> <name>Main Figure 3</name> <description>Main Figure 3</description> <cross_references /> <dates> <created>2020-07-10T19:37:24.000Z</created> <last_modified>2020-07-10T19:37:24.000Z</last_modified> <submission>2020-07-10T19:37:24.000Z</submission> <publication>2020-07-10T19:37:24.000Z</publication> </dates> <additional_fields> <field name="submitter">Alexey Kolodkin</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/740?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">University of Amsterdam</field> <field name="submitter_affiliation">VU University Amsterdam</field> <field name="submitter_affiliation">Infrastructure Systems Biology Europe</field> <field name="submitter_affiliation">University of Luxembourg</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="742"> <name>Main Figure 4 Models_Copasi</name> <description>Main Figure 4 Models_Copasi</description> <cross_references /> <dates> <created>2020-07-12T20:58:38.000Z</created> <last_modified>2020-07-12T20:58:37.000Z</last_modified> <submission>2020-07-12T20:58:38.000Z</submission> <publication>2020-07-12T20:58:37.000Z</publication> </dates> <additional_fields> <field name="submitter">Alexey Kolodkin</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/742?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">University of Amsterdam</field> <field name="submitter_affiliation">VU University Amsterdam</field> <field name="submitter_affiliation">Infrastructure Systems Biology Europe</field> <field name="submitter_affiliation">University of Luxembourg</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="743"> <name>Figure-3_Detailed Model Diagram</name> <description>Figure-3_Detailed Model Diagram</description> <cross_references /> <dates> <created>2020-07-16T11:37:28.000Z</created> <last_modified>2020-07-16T11:38:23.000Z</last_modified> <submission>2020-07-16T11:37:28.000Z</submission> <publication>2020-07-16T11:38:23.000Z</publication> </dates> <additional_fields> <field name="submitter">Alexey Kolodkin</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/743?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Amsterdam</field> <field name="submitter_affiliation">VU University Amsterdam</field> <field name="submitter_affiliation">Infrastructure Systems Biology Europe</field> <field name="submitter_affiliation">University of Luxembourg</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="747"> <name>framework model v1_5</name> <description>framework model v1_5</description> <cross_references /> <dates> <created>2020-08-14T03:33:38.000Z</created> <last_modified>2020-08-14T03:33:38.000Z</last_modified> <submission>2020-08-14T03:33:38.000Z</submission> <publication>2020-08-14T03:33:38.000Z</publication> </dates> <additional_fields> <field name="submitter">Hannah Kinmonth-Schultz</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/747?version=1</field> <field name="ModelFormat">Matlab package</field> <field name="submitter_affiliation">University of Washington, Environmental and Forest Sciences</field> </additional_fields> </entry> <entry id="749"> <name>SARS-CoV-2 coagulation pathway (COVID-19 Disease Map)</name> <description>SARS-CoV-2 coagulation pathway (COVID-19 Disease Map)</description> <cross_references /> <dates> <created>2020-08-17T14:15:02.000Z</created> <last_modified>2021-06-15T15:13:51.000Z</last_modified> <submission>2020-08-17T14:15:02.000Z</submission> <publication>2021-06-15T15:13:51.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/749?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="750"> <name>Interferon lambda pathway (COVID-19 Disease Map)</name> <description>Interferon lambda pathway (COVID-19 Disease Map)</description> <cross_references /> <dates> <created>2020-08-18T11:07:58.000Z</created> <last_modified>2021-06-11T16:19:06.000Z</last_modified> <submission>2020-08-18T11:07:58.000Z</submission> <publication>2021-06-11T16:19:06.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/750?version=2</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="752"> <name>Pyrimidine synthesis and deprivation pathway (COVID-19 Disease Maps)</name> <description>Pyrimidine synthesis and deprivation pathway (COVID-19 Disease Maps)</description> <cross_references /> <dates> <created>2020-08-19T07:15:23.000Z</created> <last_modified>2020-08-19T07:18:30.000Z</last_modified> <submission>2020-08-19T07:15:23.000Z</submission> <publication>2020-08-19T07:18:30.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/752?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="754"> <name>ec-iML1515</name> <description>ec-iML1515</description> <cross_references /> <dates> <created>2020-08-31T14:54:18.000Z</created> <last_modified>2020-08-31T14:54:18.000Z</last_modified> <submission>2020-08-31T14:54:18.000Z</submission> <publication>2020-08-31T14:54:18.000Z</publication> </dates> <additional_fields> <field name="submitter">Cheewin Kittikunapong</field> <field name="repository">FAIRDOMHub</field> <field 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<entry id="756"> <name>Draft metabolic reconstruction model of Atlantic cod liver generated from gadMor3 and iHepatocyte2322</name> <description>Draft metabolic reconstruction model of Atlantic cod liver generated from gadMor3 and iHepatocyte2322</description> <cross_references /> <dates> <created>2020-10-09T13:26:55.000Z</created> <last_modified>2020-10-09T13:26:55.000Z</last_modified> <submission>2020-10-09T13:26:55.000Z</submission> <publication>2020-10-09T13:26:55.000Z</publication> </dates> <additional_fields> <field name="submitter">Xiaokang Zhang</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/756?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Bergen</field> </additional_fields> </entry> <entry id="757"> <name>Draft metabolic reconstruction model of Atlantic cod liver generated from gadMorTrinity and 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iHepatocyte2322</description> <cross_references /> <dates> <created>2020-10-09T13:47:29.000Z</created> <last_modified>2020-10-09T13:47:29.000Z</last_modified> <submission>2020-10-09T13:47:29.000Z</submission> <publication>2020-10-09T13:47:29.000Z</publication> </dates> <additional_fields> <field name="submitter">Xiaokang Zhang</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/758?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Bergen</field> </additional_fields> </entry> <entry id="759"> <name>Morpheus model of spatio-temporal liver zonation from Wnt-Hh crosstalk</name> <description>Morpheus model of spatio-temporal liver zonation from Wnt-Hh crosstalk</description> <cross_references /> <dates> <created>2020-11-27T16:38:12.000Z</created> <last_modified>2020-11-27T16:54:27.000Z</last_modified> <submission>2020-11-27T16:38:12.000Z</submission> <publication>2020-11-27T16:54:27.000Z</publication> </dates> <additional_fields> <field name="submitter">Lutz Brusch</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/759?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">Technische Universität Dresden</field> </additional_fields> </entry> <entry id="760"> <name>Morpheus model of spatio-temporal YAP/Hippo pathway activation during liver regeneration</name> <description>Morpheus model of spatio-temporal YAP/Hippo pathway activation during liver regeneration</description> <cross_references /> <dates> <created>2020-11-27T17:04:50.000Z</created> <last_modified>2020-11-27T17:04:51.000Z</last_modified> <submission>2020-11-27T17:04:50.000Z</submission> <publication>2020-11-27T17:04:51.000Z</publication> </dates> <additional_fields> <field name="submitter">Lutz 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<description>ec-iJN1462</description> <cross_references /> <dates> <created>2021-02-26T08:26:04.000Z</created> <last_modified>2021-02-26T08:26:04.000Z</last_modified> <submission>2021-02-26T08:26:04.000Z</submission> <publication>2021-02-26T08:26:04.000Z</publication> </dates> <additional_fields> <field name="submitter">Cheewin Kittikunapong</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/769?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Chalmers University of Technology</field> </additional_fields> </entry> <entry id="770"> <name>ec-Salb-GEM</name> <description>ec-Salb-GEM</description> <cross_references /> <dates> <created>2021-02-26T08:30:42.000Z</created> <last_modified>2021-02-26T08:30:42.000Z</last_modified> <submission>2021-02-26T08:30:42.000Z</submission> <publication>2021-02-26T08:30:42.000Z</publication> </dates> <additional_fields> <field name="submitter">Cheewin Kittikunapong</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/770?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Chalmers University of Technology</field> </additional_fields> </entry> <entry id="771"> <name>U2019.1_ISSF</name> <description>U2019.1_ISSF</description> <cross_references /> <dates> <created>2021-03-01T15:25:09.000Z</created> <last_modified>2021-03-01T15:25:09.000Z</last_modified> <submission>2021-03-01T15:25:09.000Z</submission> <publication>2021-03-01T15:25:09.000Z</publication> </dates> <additional_fields> <field name="submitter">Uriel Urquiza Garcia</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/771?version=1</field> <field name="ModelFormat">SBML</field> <field 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<name>U2019.3_ISSF</name> <description>U2019.3_ISSF</description> <cross_references /> <dates> <created>2021-03-01T15:27:32.000Z</created> <last_modified>2021-03-01T15:27:32.000Z</last_modified> <submission>2021-03-01T15:27:32.000Z</submission> <publication>2021-03-01T15:27:32.000Z</publication> </dates> <additional_fields> <field name="submitter">Uriel Urquiza Garcia</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/773?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Edinburgh</field> <field name="submitter_affiliation">Heinrich Heine University of Düsseldorf</field> </additional_fields> </entry> <entry id="774"> <name>U2020.1_ISSF</name> <description>U2020.1_ISSF</description> <cross_references /> <dates> <created>2021-03-01T15:28:26.000Z</created> <last_modified>2021-03-01T15:28:26.000Z</last_modified> 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<name>U2019.2_ISSF_10xLD_LL</name> <description>U2019.2_ISSF_10xLD_LL</description> <cross_references /> <dates> <created>2021-03-05T17:30:00.000Z</created> <last_modified>2021-03-05T17:30:00.000Z</last_modified> <submission>2021-03-05T17:30:00.000Z</submission> <publication>2021-03-05T17:30:00.000Z</publication> </dates> <additional_fields> <field name="submitter">Uriel Urquiza Garcia</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/779?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Edinburgh</field> <field name="submitter_affiliation">Heinrich Heine University of Düsseldorf</field> </additional_fields> </entry> <entry id="780"> <name>U2019.3_ISSF_10xLD_LL</name> <description>U2019.3_ISSF_10xLD_LL</description> <cross_references /> <dates> <created>2021-03-05T17:31:12.000Z</created> <last_modified>2021-03-05T17:31:36.000Z</last_modified> <submission>2021-03-05T17:31:12.000Z</submission> <publication>2021-03-05T17:31:36.000Z</publication> </dates> <additional_fields> <field name="submitter">Uriel Urquiza Garcia</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/780?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">University of Edinburgh</field> <field name="submitter_affiliation">Heinrich Heine University of Düsseldorf</field> </additional_fields> </entry> <entry id="781"> <name>U2020.1_ISSF_10xLD_LL</name> <description>U2020.1_ISSF_10xLD_LL</description> <cross_references /> <dates> <created>2021-03-05T17:32:41.000Z</created> <last_modified>2021-03-05T17:32:41.000Z</last_modified> <submission>2021-03-05T17:32:41.000Z</submission> <publication>2021-03-05T17:32:41.000Z</publication> </dates> <additional_fields> <field 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</entry> <entry id="785"> <name>R script for scSynO usage of the Allen Brain Atlas data</name> <description>R script for scSynO usage of the Allen Brain Atlas data</description> <cross_references /> <dates> <created>2021-05-07T12:49:50.000Z</created> <last_modified>2021-05-07T12:49:50.000Z</last_modified> <submission>2021-05-07T12:49:50.000Z</submission> <publication>2021-05-07T12:49:50.000Z</publication> </dates> <additional_fields> <field name="submitter">Markus Wolfien</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/785?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">University of Rostock</field> </additional_fields> </entry> <entry id="786"> <name>R script to generate the preprocessing input for scSynO</name> <description>R script to generate the preprocessing input for scSynO</description> <cross_references /> <dates> <created>2021-05-07T12:58:34.000Z</created> <last_modified>2021-05-07T12:58:34.000Z</last_modified> <submission>2021-05-07T12:58:34.000Z</submission> <publication>2021-05-07T12:58:34.000Z</publication> </dates> <additional_fields> <field name="submitter">Markus Wolfien</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/786?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">University of Rostock</field> </additional_fields> </entry> <entry id="787"> <name>Unix script for the kallisto bustools processing of scRNA-seq data</name> <description>Unix script for the kallisto bustools processing of scRNA-seq data</description> <cross_references /> <dates> <created>2021-05-07T13:07:44.000Z</created> <last_modified>2021-05-07T13:07:44.000Z</last_modified> <submission>2021-05-07T13:07:44.000Z</submission> <publication>2021-05-07T13:07:44.000Z</publication> 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<field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="790"> <name>NLRP3 inflammasome activation (COVID-19 Disease Map)</name> <description>NLRP3 inflammasome activation (COVID-19 Disease Map)</description> <cross_references /> <dates> <created>2021-06-15T15:09:45.000Z</created> <last_modified>2021-06-15T15:32:56.000Z</last_modified> <submission>2021-06-15T15:09:45.000Z</submission> <publication>2021-06-15T15:32:56.000Z</publication> </dates> <additional_fields> <field name="submitter">Marek Ostaszewski</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/790?version=1</field> <field name="ModelFormat">SBML</field> <field name="submitter_affiliation">Kinetics on the move Workshop at HITS</field> <field name="submitter_affiliation">Luxembourg Centre for Systems Biomedicine (LCSB)</field> </additional_fields> </entry> <entry id="791"> <name>U2019 equation listing</name> <description>U2019 equation listing</description> <cross_references /> <dates> <created>2021-07-29T20:02:17.000Z</created> <last_modified>2021-07-29T20:02:17.000Z</last_modified> <submission>2021-07-29T20:02:17.000Z</submission> <publication>2021-07-29T20:02:17.000Z</publication> </dates> <additional_fields> <field name="submitter">Andrew Millar</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/791?version=1</field> <field name="ModelFormat">PDF (Model description)</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="792"> <name>U2020 equation listing</name> <description>U2020 equation listing</description> <cross_references /> <dates> <created>2021-07-29T20:04:41.000Z</created> <last_modified>2021-07-29T20:04:41.000Z</last_modified> <submission>2021-07-29T20:04:41.000Z</submission> <publication>2021-07-29T20:04:41.000Z</publication> </dates> <additional_fields> <field name="submitter">Andrew Millar</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/792?version=1</field> <field name="ModelFormat">PDF (Model description)</field> <field name="submitter_affiliation">University of Edinburgh</field> </additional_fields> </entry> <entry id="798"> <name>Quasi-Entropy Closure Code</name> <description>Quasi-Entropy Closure Code</description> <cross_references /> <dates> <created>2021-11-26T13:09:03.000Z</created> <last_modified>2021-11-26T13:09:03.000Z</last_modified> <submission>2021-11-26T13:09:03.000Z</submission> <publication>2021-11-26T13:09:03.000Z</publication> </dates> <additional_fields> <field name="submitter">Vincent Wagner</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/798?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">University of Stuttgart</field> </additional_fields> </entry> <entry id="799"> <name>Model of selective destruction</name> <description>Model of selective destruction</description> <cross_references /> <dates> <created>2021-12-07T15:32:06.000Z</created> <last_modified>2021-12-07T15:32:06.000Z</last_modified> <submission>2021-12-07T15:32:06.000Z</submission> <publication>2021-12-07T15:32:06.000Z</publication> </dates> <additional_fields> <field name="submitter">James Wordsworth</field> <field name="repository">FAIRDOMHub</field> <field name="omics_type">Models</field> <field name="full_dataset_link">https://fairdomhub.org/models/799?version=1</field> <field name="ModelFormat" /> <field name="submitter_affiliation">University of Newcastle</field> </additional_fields> </entry> <entry id="800"> <name>Model of 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University of Technology</field> </additional_fields> </entry> </entries> </database>
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Created: 18th Feb 2022 at 17:31
Last updated: 22nd Feb 2022 at 17:14
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Version 4 (latest) Created 22nd Feb 2022 at 17:14 by Wolfgang Müller
More debugging.
Version 3 Created 22nd Feb 2022 at 12:04 by Wolfgang Müller
Fixes as requested by Gaurhari. Thanks for the exchange!
Version 2 Created 18th Feb 2022 at 18:08 by Wolfgang Müller
The XML declaration was missing. Fixed now.
Version 1 (earliest) Created 18th Feb 2022 at 17:31 by Wolfgang Müller
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https://orcid.org/0000-0002-4980-3512
Projects: SysMO DB, FAIRDOM, ICYSB 2015 - International Practical Course in Systems Biology, de.NBI-SysBio, Regeneration and Repair in Acute-on-Chronic Liver Failure (LiSyM-ACLF - Pillar III), Early Metabolic Injury (LiSyM-EMI - Pillar I), Chronic Liver Disease Progression (LiSyM-DP - Pillar II), LiSyM Core Infrastructure and Management (LiSyM-PD), Liver Function Diagnostics (LiSyM-LiFuDi - Pillar IV), Molecular Steatosis - Imaging & Modeling (LiSyM-MSIM), Multi-Scale Models for Personalized Liver Function Tests (LiSyM-MM-PLF), Model Guided Pharmacotherapy In Chronic Liver Disease (LiSyM-MGP), The Hedgehog Signalling Pathway (LiSyM-JGMMS), Kinetics on the move - Workshop 2016, Example use cases, SBEpo - Systems Biology of Erythropoietin, FAIRDOM & LiSyM & de.NBI Data Structuring Training, MESI-STRAT, INCOME, EnzymeML, PoLiMeR - Polymers in the Liver: Metabolism and Regulation, MS_DILI, GMDS Project Group "FAIRe Dateninfrastrukturen für die Biomedizinische Informatik", COMBINE Multicellular Modelling, COVID-19 Disease Map, COVID-19 related studies and tools in Germany, nfdi4health - German National Research Data Infrastructure for Personal Health Data, NMTrypI - New Medicines for Trypanosomatidic Infections, ModeleXchange initiative, SNAPPER: Synergistic Neurotoxicology APP for Environmental Regulation, BioCreative VII, SDBV ephemeral data exchanges, The BeeProject, SDBV/HITS, MESI-STRAT Review, MESI-Review 2024, DeepCurate, SABIO-VIS
Institutions: Heidelberg Institute for Theoretical Studies
https://orcid.org/0000-0002-4980-3512
I am group leader of the SDBV (Scientific Databases and Visualisation) group at the HITS gGmbH, the Heidelberg Institute for Theoretical Studies.
I am interested in finding data. Starting with my master's thesis I have always worked on how to store data in a way that you can find it, and how to make sense out of data that has been stored.
Within FAIRDOM I find interesting to help people to store their data in a way that they make sense even after years.
Advanced Programmes list for this Data file with search and filtering
FAIRDOM is establishing a support and service network for European Systems Biology. FAIRDOM is a joint action of ERA-Net ERASysAPP and European Research Infrastructure ISBE to establish a data and model management service facility for Systems Biology. Our prime mission is to support researchers, students, trainers, funders and publishers by enabling Systems Biology projects to make their Data, Operating procedures and Models, Findable, Accessible, Interoperable and Reusable (FAIR).
Projects: FAIRDOM, FAIRDOM user meeting, FAIRDOM Community Workers
Web page: http://fair-dom.org
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FAIRDOM will establish a support and service network for European Systems Biology. We will serve projects in standardising, managing and disseminating data and models in a FAIR manner: Findable, Accessible, Interoperable and Reusable.
