One pot cascade 13

Conversion of XYL to KG in one pot cascade of Weimberg pathway enzymes of Caulobacter crescentus, with NAD recycling, measured in NMR. https://jjj.bio.vu.nl/models/experiments/shen2020_fig3b/simulate

DOI: 10.15490/fairdomhub.1.assay.989.2

Zenodo URL: None

Created at: 30th Jan 2020 at 09:41

Contents

One-Pot-Cascade 13 data

Data files for the conversion of XYL to KG, via the Caulobacter crescentus Weimberg pathway enzymes: XDH, XLA, XAD, KDXD, KGSADH, with NAD recycling.

  • OnePotCascade-13.xlsx

One-Pot-Cascade 13

Model for the Caulobacter crescentus Weimberg pathway, describing the conversion of Xyl to KG, with NAD recycling. If the Mathematica notebook is downloaded and the data file is downloaded in the same directory, then the notebook can be evaluated, and the figure in the manuscript for cascade 13 will be reproduced.

  • onePotCasc13-SEEK.nb

Cascade analysis (shen2)

Model for the Caulobacter crescentus Weimberg pathway, describing the conversion of Xyl to KG.

  • shen2.xml
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MD5: 4a32486fac2d6046f0c49a9cf80ca682

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Citation
Snoep, J., & Shen, L. (2020). One pot cascade 13. FAIRDOMHub. https://doi.org/10.15490/FAIRDOMHUB.1.ASSAY.989.2
Snapshots
Snapshot 2 (30th Jan 2020) DOI
Snapshot 1 (8th Jan 2020) DOI
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Created: 30th Jan 2020 at 09:41

Last updated: 30th Jan 2020 at 10:03

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