XDH

Kinetic characterisation and mathematical modelling of XDH.

DOI: 10.15490/fairdomhub.1.assay.968.1

Zenodo URL: None

Created at: 8th Jan 2020 at 13:47

Contents

XDH-initial rate kinetics data

Initial rate kinetics for xylose dehydrogenase of Caulobacter crescentus, saturation with xylose and NAD, and inhibition by NADH and xylonolactone.

  • XDH-initial rate kinetics.xlsx

XDH model

Model for the Caulobacter crescentus xylose dehydrogenase, describing the initial rate kinetics including substrate dependence and product inhibition. If the Mathematica notebook is downloaded and the data file for the XDH kinetics is downloaded in the same directory, then the notebook can be evaluated. The model in the notebook will then be parameterised and the figures in the manuscript for XDH will be reproduced.

  • XDH-initial rate.nb
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Citation
Snoep, J., & Shen, L. (2020). XDH. FAIRDOMHub. https://doi.org/10.15490/FAIRDOMHUB.1.ASSAY.968.1
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Snapshot 1 (8th Jan 2020) DOI
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Created: 8th Jan 2020 at 13:47

Last updated: 8th Jan 2020 at 13:47

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