Data files
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Collected PDB-files of homology models of alpha-tubulin, all based on T. thermophila tubulin PDB-ID 5ubq, chain A:
Includes models of the following dinitroaniline herbicide sensitive species (UniProt ID in brackets):
- C. reinhardtii (P09204)
- E. indica (O22347)
- L. donovani (I3W8N6)
- L. infantum (E9AGJ8)
- L. major (Q4QGC5)
- P. falciparum (P14642)
- S. viridis (Q65C79)
- T. brucei (Q4GYY5)
- T. cruzi (Q27352)
- T. gondii (P10873)
- Z. mays (P14640)
Includes models of the following dinitroaniline ...
Creators: Ina Poehner, Rebecca Wade
Submitter: Ina Poehner
DownloadThis archive contains all results of the PIPSA analysis run in zipped form. It contains the following subfolders:
- apbs: Computed electrostatic potential grids, all log files and similarity matrices for the full protein and all sites.
- pdb2pqr: PQR files: conversion results after processing uploaded PDB files with pdb2pqr
- pdbs: Original uploaded PDB files
The following sites have been analyzed (provided are site center (based on T. cruzi model, Ca of the residue) and the sphere radius):
Blume ...
Creators: Ina Poehner, Rebecca Wade
Submitter: Ina Poehner
